Domain Predictions — View

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PF13964

Source: Pfam

Description

Kelch motif

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 16

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3779370.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: kelch repeat-containing protein At3g27220-like isoform X1 [Cicer arietinum] gi\|502156650\|ref\|XP_004510579.1\|	Domains G3DSA:2.120.10.80 IPR015915 PF13964 PTHR24413 PTHR24413:SF111 SSF117281	6
Lj2g3v1549980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cicer arietinum] gi\|502162027\|ref\|XP_004512365.1\|	Domains G3DSA:2.130.10.80 IPR001810 IPR015916 PF13964 PTHR24412 PTHR24412:SF217 SSF117281 SSF81383 mobidb-lite	9
Lj3g3v2058570.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains CYTOPLASMIC_DOMAIN G3DSA:2.120.10.80 IPR015915 NON_CYTOPLASMIC_DOMAIN PF13418 PF13964 PTHR24413 PTHR24413:SF137 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF117281 SignalP-TM_GRAM_POSITIVE TMhelix TRANSMEMBRANE	16
Lj3g3v2058580.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: kelch repeat-containing protein At3g27220-like isoform X1 [Cicer arietinum] gi\|502148068\|ref\|XP_004507025.1\|	Domains G3DSA:2.120.10.80 IPR006652 IPR015915 PF01344 PF13418 PF13964 PTHR24413 PTHR24413:SF137 SM00612 SSF117281	10
Lj3g3v2248230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains Coil G3DSA:1.20.1280.50 G3DSA:2.130.10.80 IPR001810 IPR006652 IPR015916 PF00646 PF01344 PF13964 PTHR24413 PTHR24413:SF93 SM00612 SSF117281 SSF81383	14
Lj3g3v2248250.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: F-box/kelch-repeat protein At1g80440-like [Cicer arietinum] gi\|502147661\|ref\|XP_004506867.1\|	Domains G3DSA:2.120.10.80 IPR015915 PF13964 PTHR24413 PTHR24413:SF93 SSF117281 mobidb-lite	7
Lj4g3v2603890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: F-box/kelch-repeat protein At1g55270-like [Cicer arietinum] gi\|502140780\|ref\|XP_004504335.1\|	Domains G3DSA:1.20.1280.50 G3DSA:2.130.10.80 IPR001810 IPR006652 IPR015916 PF00646 PF01344 PF13964 PTHR24412 PTHR24412:SF234 SM00612 SSF117281 SSF81383	13
LotjaGi2g1v0344900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kelch repeat-containing F-box family protein; TAIR: AT1G31350.1 KAR-UP F-box 1; Swiss-Prot: sp\|Q8GX29\|SKI25_ARATH F-box/kelch-repeat protein SKIP25; TrEMBL-Plants: tr\|A0A1J7GEY5\|A0A1J7GEY5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344900	Domains G3DSA:2.120.10.80 IPR015915 IPR036047 PF13964 PTHR47590 SSF117281 SSF81383 mobidb-lite	8
LotjaGi3g1v0346000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kelch repeat-containing protein family; TAIR: AT1G51540.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q9LK31\|Y3272_ARATH Kelch repeat-containing protein At3g27220; TrEMBL-Plants: tr\|A0A151RPA1\|A0A151RPA1_CAJCA Kelch repeat-containing protein family; Found in the gene: LotjaGi3g1v0346000	Domains G3DSA:2.120.10.80 IPR006652 IPR015915 NON_CYTOPLASMIC_DOMAIN PF01344 PF13418 PF13964 PTHR46773 PTHR46773:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF117281 SignalP-TM TMhelix	16
LotjaGi3g1v0346000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kelch repeat-containing protein family; TAIR: AT1G51540.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q9LK31\|Y3272_ARATH Kelch repeat-containing protein At3g27220; TrEMBL-Plants: tr\|A0A151RPA1\|A0A151RPA1_CAJCA Kelch repeat-containing protein family; Found in the gene: LotjaGi3g1v0346000	Domains G3DSA:2.120.10.80 IPR006652 IPR015915 NON_CYTOPLASMIC_DOMAIN PF01344 PF13418 PF13964 PTHR46773 PTHR46773:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00612 SSF117281 SignalP-TM TMhelix	17
LotjaGi3g1v0361800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	F-box/kelch-repeat protein family; TAIR: AT1G15670.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q9LMR5\|FK126_ARATH F-box/kelch-repeat protein At1g15670; TrEMBL-Plants: tr\|A0A072UH78\|A0A072UH78_MEDTR Galactose oxidase/kelch repeat protein; Found in the gene: LotjaGi3g1v0361800	Domains G3DSA:2.120.10.80 IPR001810 IPR006652 IPR015915 IPR036047 PF00646 PF01344 PF13964 PTHR46407 PTHR46407:SF9 SM00612 SSF117281 SSF81383	13
LotjaGi4g1v0374400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	F-box/kelch-repeat protein; TAIR: AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q93W93\|FBK22_ARATH F-box/kelch-repeat protein At1g55270; TrEMBL-Plants: tr\|I3SJ08\|I3SJ08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0374400	Domains G3DSA:2.120.10.80 IPR001810 IPR006652 IPR015915 IPR036047 PF00646 PF01344 PF13964 PTHR46344 PTHR46344:SF9 SM00612 SSF117281 SSF81383	13
LotjaGi4g1v0374400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	F-box/kelch-repeat protein; TAIR: AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q93W93\|FBK22_ARATH F-box/kelch-repeat protein At1g55270; TrEMBL-Plants: tr\|I3SJ08\|I3SJ08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0374400	Domains CYTOPLASMIC_DOMAIN G3DSA:2.120.10.80 IPR006652 IPR015915 NON_CYTOPLASMIC_DOMAIN PF01344 PF13964 PTHR46344 PTHR46344:SF9 SM00612 SSF117281 TRANSMEMBRANE	12
LotjaGi5g1v0231100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kelch repeat protein, putative; TAIR: AT1G18610.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q5EA50\|RABEK_BOVIN Rab9 effector protein with kelch motifs; TrEMBL-Plants: tr\|K7LJG6\|K7LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0231100	Domains G3DSA:2.120.10.80 IPR006652 IPR015915 PF13418 PF13964 PTHR46093 SM00612 SSF117281 mobidb-lite	9
LotjaGi5g1v0231100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kelch repeat protein, putative; TAIR: AT1G74150.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q5EA50\|RABEK_BOVIN Rab9 effector protein with kelch motifs; TrEMBL-Plants: tr\|K7LJG6\|K7LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0231100	Domains G3DSA:2.120.10.80 IPR006652 IPR015915 PF13418 PF13964 PTHR23244 SM00612 SSF117281 mobidb-lite	9
LotjaGi5g1v0231100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kelch repeat protein, putative; TAIR: AT1G18610.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp\|Q5EA50\|RABEK_BOVIN Rab9 effector protein with kelch motifs; TrEMBL-Plants: tr\|K7LJG6\|K7LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0231100	Domains G3DSA:2.120.10.80 IPR006652 IPR015915 PF13418 PF13964 PTHR46093 SM00612 SSF117281 mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	6.25