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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0378200 |
| Transcript ID | LotjaGi4g1v0378200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT4G18700.1 CBL-interacting protein kinase 12; Swiss-Prot: sp|Q9SN43|CIPKC_ARATH CBL-interacting serine/threonine-protein kinase 12; TrEMBL-Plants: tr|A0A0L9TK21|A0A0L9TK21_PHAAN Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi4g1v0378200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75746241..75748715) extracted from Lotus japonicus Gifu genome v1.2.
CAAGTCTAAAAAAATTTGCATTGTGGTTGCCGACTAGGTGATATCAAAGAAAGTGTCAAAACCACCACACAAAATATCAG AGAAACACGTTGACAACCACACCCAATTATTAGCGTCATAGCCTCATAGGCATAGTTACAAAGCTTCCATGAAGGTTTAT AATCATTGATCAATAGAAAGCACCTCCATCTTCCCCTCAGTACAAGCTTCCGTATAATCCATAATCCATGGCTGAGGCAG CTCCCAAGAACCGCCACCCAAAAACCTCCACCACCAACCCTGTTACCAACAAGAAGGAAACCACAAACATTCTCCTGGGA CGGTTCGAGCTAGGGAAGCTCCTCGGCCATGGAACCTTCGCCAAAGTCCACCATGCCCGGAACATCAAAACCGGCGAAGG CGTCGCCATAAAGATCATCAACAAAGAGAAGATTCTCAAGAGTGGCCTAGTCTCACATATCAAGCGAGAGATCTCCATCC TCCGCCGTGTCCGCCACCCAAACATTGTGGAGCTCTTCGAAGTCATGGCGACCAAGACCAAGATCTACTTCGTGATGGAG TTCGTCCGCGGCGGCGAGCTCTTCAAGAAGGTTGCCAAAGGAAGACTTAAGGAAGAAGTCGCCAGAAAATACTTCCAGCA GTTAATCTGCGCGGTGGAGTTTTGCCACAGCAGAGGAGTTTTCCACCGTGATTTGAAGCCTGAGAATTTGTTGTTAGACT TGGATGGAAACCTTAAGGTTGCTGACTTTGGACTCTCTGCGGTGTCTGATCAAATCAGGCAAGATGGGTTGTTTCACACG TTTTGTGGGACACCTGCTTATGTTGCTCCTGAGGTTCTTGGTAGAAAAGGCTATGATGGTGCTAAGGTTGATATTTGGTC TTGTGGGATTGTTCTGTTTGTGTTAATGGCTGGTTATTTGCCATTTCATGATCTTAATGTCATGGCAATGTACAAGAAGA TTTACAAGGGTGAATTTCGTTGTCCTAGGTGGTTTTCCCCTGAACTCACCAAGCTTCTTATTAGGCTTCTTGATACAAAC CCTGAAACCAGAATTTCAATTCCTGAGATTATGATGAATCCCTGGTTCAAGGAAGATTTCAAGCAAATCAAATTCTATGT GGAGGATGATAAAGTTTGTAGCATTGATCATGATGATGAGGGATTGCCATTGTTTAATTCAGAGTTCTCAGTTTCAGAAT CTGACTCTGAGCTTGAGAGTATTAGAAGGAGGACGAGTCACAATAGTGCTAGTGGTTCTTCATTGCCAAGACCTGCGAGT TTGAATGCATTTGACATAATTTCATTTTCTCAAGGGTTTGATCTTTCTGGGTTGTTTGAGGAAAAGGAAGATAAGGCGAG GATTGTTACCAGCGCTTCAGTGTCGAAGATTATATCGAAATTGGAGGAAATTGCTGAGCTTGTTAGATTTACAGTGAGGA AGAGAGATTGCAGGGTGAGCTTGGAGGGTTCTAGAGAAGGGGTGAAGGGGAAATTGACAATTGCTGTGGAGGTTTTTGAG CTGACACATTCGTTGGTGGTGGTGGAGGTGAAGAGAAAAGCAGGGGATAAAACAGAGTATGAGGAGTTTCTTAACTCTGA ATTGAACCCTGCATTGCAGGGTTTGATGATGGAGGAAACTGCAACTTCTAGTTCATTTCATTCTGCACCTGCTGAACCTG AACCTTCTCAACAACGCTCACTTTCTGATTCTGCTATTGACATACCTTCAGATGCTGAATCTTTGCAGTGAAATACCTGA AAAAAATGATAGAGAATAAGAGACAAGAGTATCACATTCTTTTTTTGTTCTGTTTTTTCTATTTGTAGAATCTCTATGGG GTTTCTATTTCTATCTTTCTTTTGTTTTTCACCTAGGACTGTTCTGTTTTTTCTAATAGATGCAATTGTCCTTCTATGAT CCAAATGCTGTAAGAAGAAGACTAATTTAATTAAAATGGAATAAATTTGCACACATGTCTTGGCACATTGCTGTGTTACT ATTTTTTACATATTTTCATTCTGGATTGCAAGTAGTGAGAAAATAATTTTATGGCGTCAGATCTTTGTTTTAAGAGGGTT TGTTTTGAAATTGATTTTCTTTGGTTGTTTAAGTCTTGGAAGTGCTCTTCTAGGGTAATTCTTATTTTGCCTTGGTTGTT GGCGGCGGTAGAGACTTAGCTTCTAGTTTTGATGTTTTTGAGTTTTTGTTTCTTCATCATGTTTGTAATTTTGTTGTTGA TTTCTTACCTAGCTTTCTTTTCAATCGAATAATGTAGTTTGAATTAAGGAAGTTCCTCCAGATTTCTCTTCTTTGATTCA TCGTGATGCATTGGCTTCTATACCTGTTTCTTCTTAATAAATGACGTATGTTTCGAAAAAAAAAAAACCATATAGCAATT ACTTTTGATTAATTCATTAAGCATACATTTCAATGACTTTAGTCCTCAACTGGTTCCTATTACCTATATGCATTA
CDS sequence (LotjaGi4g1v0378200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGCAGCTCCCAAGAACCGCCACCCAAAAACCTCCACCACCAACCCTGTTACCAACAAGAAGGAAACCACAAA CATTCTCCTGGGACGGTTCGAGCTAGGGAAGCTCCTCGGCCATGGAACCTTCGCCAAAGTCCACCATGCCCGGAACATCA AAACCGGCGAAGGCGTCGCCATAAAGATCATCAACAAAGAGAAGATTCTCAAGAGTGGCCTAGTCTCACATATCAAGCGA GAGATCTCCATCCTCCGCCGTGTCCGCCACCCAAACATTGTGGAGCTCTTCGAAGTCATGGCGACCAAGACCAAGATCTA CTTCGTGATGGAGTTCGTCCGCGGCGGCGAGCTCTTCAAGAAGGTTGCCAAAGGAAGACTTAAGGAAGAAGTCGCCAGAA AATACTTCCAGCAGTTAATCTGCGCGGTGGAGTTTTGCCACAGCAGAGGAGTTTTCCACCGTGATTTGAAGCCTGAGAAT TTGTTGTTAGACTTGGATGGAAACCTTAAGGTTGCTGACTTTGGACTCTCTGCGGTGTCTGATCAAATCAGGCAAGATGG GTTGTTTCACACGTTTTGTGGGACACCTGCTTATGTTGCTCCTGAGGTTCTTGGTAGAAAAGGCTATGATGGTGCTAAGG TTGATATTTGGTCTTGTGGGATTGTTCTGTTTGTGTTAATGGCTGGTTATTTGCCATTTCATGATCTTAATGTCATGGCA ATGTACAAGAAGATTTACAAGGGTGAATTTCGTTGTCCTAGGTGGTTTTCCCCTGAACTCACCAAGCTTCTTATTAGGCT TCTTGATACAAACCCTGAAACCAGAATTTCAATTCCTGAGATTATGATGAATCCCTGGTTCAAGGAAGATTTCAAGCAAA TCAAATTCTATGTGGAGGATGATAAAGTTTGTAGCATTGATCATGATGATGAGGGATTGCCATTGTTTAATTCAGAGTTC TCAGTTTCAGAATCTGACTCTGAGCTTGAGAGTATTAGAAGGAGGACGAGTCACAATAGTGCTAGTGGTTCTTCATTGCC AAGACCTGCGAGTTTGAATGCATTTGACATAATTTCATTTTCTCAAGGGTTTGATCTTTCTGGGTTGTTTGAGGAAAAGG AAGATAAGGCGAGGATTGTTACCAGCGCTTCAGTGTCGAAGATTATATCGAAATTGGAGGAAATTGCTGAGCTTGTTAGA TTTACAGTGAGGAAGAGAGATTGCAGGGTGAGCTTGGAGGGTTCTAGAGAAGGGGTGAAGGGGAAATTGACAATTGCTGT GGAGGTTTTTGAGCTGACACATTCGTTGGTGGTGGTGGAGGTGAAGAGAAAAGCAGGGGATAAAACAGAGTATGAGGAGT TTCTTAACTCTGAATTGAACCCTGCATTGCAGGGTTTGATGATGGAGGAAACTGCAACTTCTAGTTCATTTCATTCTGCA CCTGCTGAACCTGAACCTTCTCAACAACGCTCACTTTCTGATTCTGCTATTGACATACCTTCAGATGCTGAATCTTTGCA GTGA
Protein sequence (LotjaGi4g1v0378200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAAPKNRHPKTSTTNPVTNKKETTNILLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKSGLVSHIKR EISILRRVRHPNIVELFEVMATKTKIYFVMEFVRGGELFKKVAKGRLKEEVARKYFQQLICAVEFCHSRGVFHRDLKPEN LLLDLDGNLKVADFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDIWSCGIVLFVLMAGYLPFHDLNVMA MYKKIYKGEFRCPRWFSPELTKLLIRLLDTNPETRISIPEIMMNPWFKEDFKQIKFYVEDDKVCSIDHDDEGLPLFNSEF SVSESDSELESIRRRTSHNSASGSSLPRPASLNAFDIISFSQGFDLSGLFEEKEDKARIVTSASVSKIISKLEEIAELVR FTVRKRDCRVSLEGSREGVKGKLTIAVEVFELTHSLVVVEVKRKAGDKTEYEEFLNSELNPALQGLMMEETATSSSFHSA PAEPEPSQQRSLSDSAIDIPSDAESLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 213 | 213 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| MobiDBLite | 9 | 23 | 15 | - | – | |
| PANTHER | 19 | 481 | 463 | 9.8E-271 | – | |
| PANTHER | 19 | 481 | 463 | 9.8E-271 | – | |
| Gene3D | 23 | 344 | 322 | 3.1E-103 | – | |
| SUPERFAMILY | 29 | 349 | 321 | 8.09E-93 | ||
| SMART | 33 | 287 | 255 | 2.7E-106 | ||
| ProSiteProfiles | 33 | 287 | 255 | 51.863 | ||
| Pfam | 34 | 287 | 254 | 1.7E-73 | ||
| ProSitePatterns | 39 | 62 | 24 | - | ||
| ProSitePatterns | 151 | 163 | 13 | - | ||
| Phobius | 214 | 233 | 20 | - | – | |
| TMHMM | 216 | 233 | 18 | - | – | |
| Phobius | 234 | 507 | 274 | - | – | |
| ProSiteProfiles | 347 | 371 | 25 | 14.755 | ||
| Gene3D | 348 | 469 | 122 | 7.4E-41 | – | |
| Pfam | 349 | 405 | 57 | 5.6E-23 | ||
| CDD | 353 | 464 | 112 | 6.74004E-44 | – | |
| MobiDBLite | 470 | 507 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi4g1v0378200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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