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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0383300 |
| Transcript ID | LotjaGi4g1v0383300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA-processing factor 39; TAIR: AT1G04080.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O74970|PRP39_SCHPO Pre-mRNA-processing factor 39; TrEMBL-Plants: tr|A0A0B2SU39|A0A0B2SU39_GLYSO Pre-mRNA-processing factor 39; Found in the gene: LotjaGi4g1v0383300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76197907..76206663) extracted from Lotus japonicus Gifu genome v1.2.
GGGAAAGTGGAAAACCGAGCATCTGAGTTTCACTCTTTCTTCTCACCAGAACTACGTTGGGGTGGTGCGGTGTGGTTATT GCTCTGTTCTCTTCTCTCTCATCCTCTTCTAATGGCGGCGCTGTGCCCCACACTCTCATTCGGTAAGCCAAAAATTAGAG CTTTATTTGTTTTTTCAATTAAAAAAGTGATTTTTAATTAAAATAATGTTTAATATTTTTTATAATGATACTGCATATTA TTAGCTTGTTAATTTTCACAACATAGCAACAAATTGAGATGCTTGTTATTTTTTCTTTGCAGCTACAGATGACAATGTGG AACTTGAAGATGTTGTTTCTAAGGGCTCATTAGCTTTTGATGAATGGACTATACTCATTTCAGAGATTGACAACACATAT CCTGTAAGTTTCATACCAAAATGTTTATTGATTTTTCTTGAAATATCATTATACACATAACTATAATGCAGGATGGTTCA GCTCTAATGCTGTACTTTGTGATCAATCTTTCTTTATTGGTATGTCAAGCTTAAAATATAAATAAGGTGTTTGGGTCTAT TTCTTCAGGATAATGTGGAGAAAATATGTCTAGTTTATGACCATTTCTTGTCCAAATTCCCGTTGTGTTATGGCTATTGG AGGAAGTATGCTGCCCACATGGCACGCTTATGCCCTGCAGATAAAGTTGTTGAAGTCTTTGAACAAGCTGTGTTAGCAGC AACATATTCAGTGGGCATGTGGGTTGACTACTGTAGCTTTGGTATGTTAGCTTTTGAGGAACCATCTGATATTCGGAGGT AATTAAAGCATACACATTGTTCTCTCTTCATAGTCTTTTACTATGGTTGATTTTTGAAGGCAATAGGATGATCTTATTGA TATATTTTTGCCAGATTGTTCAAGAGAGCCATTTCCTTTGTTGGGAAGGACTACTTATGTCATACCTTGTGGGATAAGTA TATTCAATTTGAGTTTTCCCAGCAGCAGTGGATTTCTCTTGCTCACGTTTATATCCAAACTCTTAAGTTTCCAACCAAAA AGTTGCATCAGTATTATGATAGGTATGCCTTCTATTCTGATTTTTTTCTAAGTTGTTCTGCAAAAAGTACTGGGAAACTT TGCTCTACTTGCATTATCTGTATAAAGTCGTAGTTGAATAAAAGCTAACAATATTTTTCTACTCCATGGTCGGACGTTGA TAGTATTTACAAGTTCTGAGGCTTGCATGGCTTGAATATGCTCTGGTAATGGACCCTAATCCAGGTCATGAAATCTTTTG ATTGCCTGAAGTGTCATTCATAGTTCATAACTAAACACATTTTTAGCTAAACATTTCAGTATATTTTGTTTTTAGTGATA ATTCTTAATTTTAATATAAATTATGGAATAAAGAATGCACAACATAAGTTAAAATGTCCTCATTAATATGATTTACGTTC TTAAAAAAATTAAATTTAGCTAAATTTGCTTAGATAGAATTCTTCAATCATAAATATTTTTTGTTTGGTGTATAATGGTG GTAATGAGGTTTGACCCAATAGCCTCACACAGACTATCAGACTAGCTGTCAAAAGGATTGGCTTGCGACTTATATCAGGG GGTTAGGATTATGGGGTTTAACTTAATTTTCCTTTGATTAGTACATGCAAATTTTATGTCAGAGATTCAACTATTCAAGA GATGTGAAATACTGAAATCTCAATCTGCATCTCACTCTACGCAAATTTTAGTCATTCTCTCCCTGCTATTGCTTTTGCAA CTTTTACTGCTGATTGCTGAATTACTTTTTAGCTGGCCTGCATAATGCAGACTAGCCATATTTTTGTAGTCTATATTTCA TGTCTTTTATTCATTCTTTTAGTGTTTTCCTAGATAGTAGATATTACTTCTTTGTTAGTCATCACCTTCATCTTATGTGC TTCTGAATTCTCACACTACTTGAAGATATGAATGACTGTTCAAATTGTGTAACCGTACAGACAGTGTTTGCTTAACATAT GTATTGAATATTGATATAGGTTTTATACATACATATATTTGAATAATGGACTTACCAGATATTAGTTCTGTATCTCTTCA GTTTTAAAAAGTTGGCAACCTTTTTGGAAGAGGGAATGACAAGCCTGGACAATTCTCCAAAGCAATTGCAATCTGAATCT TGTTTTGATGGAGAAATTCCTATGACTATGTGTTGCAAGGATGATGAGATTTATTGCATTATCAAGGATATGATGGATTC ATCTGTTGGAATGGCTTGTTCAATAGCTGTAAAGAAGTACAGGGTTATTGGAGAACAGCTCTATCATAATGCTTGTGAGT TGTATTCAAAGATTAGTTCTTTTGAGGCTAATATTGAGAGACATTACTTTCATGTTCAACCACTTGATGCAAAGCAATTG CAGAATTGGCATGATTATCTGGATTTTATTGAACTTCAAGGGGATTTTGACTGGGTACCTTTTCGGCACAGTTTTTACCA TCAAAGTTATTTAGTTGTTTATTTAGTTTTTATATTATTTTCTAAAATATTCGATTTCTCGCATTGAGGATAGGCTGTGA AACTTTATGAGAGATGCTTGATTGTGTGTGCCAACTATTGTGATTATTGGATGCGTTATGTGGACTTCATGGAAGCCAAG GGAGGAAGAGAAATAGCAAACTACTCTCTAGATCGAGCCACCGAAATTTATTTGAAGGTATGTTTCTAATTATCTTTTAT GCTGATTGAATTTCATGTTAATGGTCAGCATCAGCATCTTCTTATTTTGCACCTAAGAGTTTTCTCTACAGTTGTCCGGC CGGACAAAACAATTGCAAAAGATAGTATATGAAACATTGACATATATATAATAGATGTCCAAGATAGAACTAATTTGTTA CAGCACTTTATAAATGAAGGAAGAAACGAAACATAATAGTTTGGATATGGAAGTTCGCATGTGTTATGAGTCATGCTCAA TGTCTTAAAAATGGAAAGATCAAAATCAATCAATTAGTTATATCATAATAATTATGGTCTTGTAATATTTCATGGGAATC TTTTTTCCCTTGCATTTGTTATGGCGCTTTTGCATGTGTTTATGGCATTGGCTTTGCTCCTATGCTCATGATTGATTTCA AGGAGACTCTCCAGTTCTGATATACAGAAAGATTGAAAAGCTACATAGATCTTTGGCTCTATTTTTTTATTCATCTCCCT AACAAGTACATTTCTTAACCAAAAACAAATAGTTGTCCACTTTTGTCAACAAAAATTCCAATTTAGGAAATTAACCATCC AAGTGGTAAACTAAATACAATATGGTATGTTTTTTCTGAACTAGGTTATACCCTGCTAAAACTTGCTTAATTCCTCTCTT CTCTACGCGTTGACTTCATACCTTTATGCTTGACTTGGAAATGTTTATAGCTCAACCATATGTTCGTTGCAGAGTGTGCC GGCAATCCATTCATTCAATGCTAGGTTTAAGGAACAGATAGGAGATGTTATAGCTTCCCGTGCTTTATATATTCAGAGGG GTAAAGGGACAGATTCAGACTTTGTGGAGAGTGTTAAATCTATAGCTAATATGGAAAAACGTTTGGTATGCAATTAGCCT TTGCTGCCATTGAAGTCTGCAATGTCGAGATATTTTAAGTGATTGCATGTGCTGCTTTATATCTTTATTGCAGGGAAACA TGGAGTCTGCTTTCAATATATACAAAGAAGCTCTAGAAATGGCTGCAGCTGAGGAAAAGCTACAAGCCCTTCCCCTTTTA TATATTCATTTATCTCGGCTAAAATATATGGTAGGTATTAAGTGCTTGTCTGCTTTGAGCATTAGGGTTTTAACCATTTC ATTTAAAGATGTGATTCTAATTATTATGATGAAAATCAGTCCTCAAGTTTTTCTCACTTTTGAGATAATTGGTTCATGAC ATGGTGACATATTTTTCTCACTTTTGGCTTGTTTATTTTGTTTGTTTCTTTTCATACCAGCAGTATTTGTAGACGTGAAT TCAAAGAGAATAACTTTTGTTGGAGTTATACTTAAAGGATTAGGCTGAGTACCTATAGGCTATAGCTACTCGTTACAATA GTTCTTTCTAATCAACTGGTTGAAGCAAGTATATCAGAATTATACAAATAAGAGTTCTTTCAAATTAAAAACAAGAAAAA AATCTGTCACCTATGTAACACATGCTGATGTCAGGTGTAGTTAACTAATCTTTTTGTGTTGTTCCTTTCTTGGCTTTAAG AGTACAAACAGCGAGGATGCTTCAAGAGATGTCTTAATTGATGGTATCAGAACTTTGCCTCCAAACAAATTGCTTCTGGA GGTATGTCTGCCTTTTCCCATATGTCATTTATATATCTTTTGTAAAAATAGATATACTTAAGCTGGAATTGCTCAGAAAT CACAATAAGCATGCATTTACACCCCCTCCCCATCCCCCCGTCTGGGCTTGGTTGTCAACTATTCTGTAAGTAGCCTACGG AAATACCAGATAACTAACCAAAGTTTTTTTCCCACTAACTGGGGTCAGCTACATACATCAAAGAACGTCATAATGTGCTA TTAAACCAGATAAGATAAGCTTTTAATTGCTTGCTAGTAGATAGGGCACTTCATATAGACAGAACAAGTCAAACTATCCA GTTGCTACTGATCTTCATGGATACTCAACAGTAAGACTCCCCCCCCCCTGAAAAAAAAAAAATTGTCTCCCACTGCCAAA CACGTGTTGAAGAAGAAATTGTGGGTTTAAAGGCTTGCAGGTGTGGATACCAACTAAACTAAAATAAGGAACTGTAAAAG GCACAGTTCATATTCTGTCAAGCTTGAGCTGTTAGGTGCAATCCTAGGAGTGCATTTATTCTTACAAGCATCAATTTTGG TTATTCAGGGGATAAAATCATCATATTTAAATTTAAATTGTGATGAAATTTCTTCATTTGTTTTGCTGTTCTTCTGCAGG AATTGATAAAGTTCTCAATGGTGCATGGAGGGACAAAGCACATAACTTTAATAGATACAATTATAGCTGATGCATTATCT CCAAGGTCTGATGAATCTCAAGGTCTGGGTACCGAGGATGCTGAGGATATATCAAAGTTATACCTAGAGGTTACATTTTT CATTTGAACTTAATTATACTGGAGTCCGTTATATGATTTAGGAGTACAGTACTATGAGGTTATTGCTTGTTATTTTTACT TTTAGTTATTTGTCTCATGGTTCAACCTGTTCATATTAGCAAAATTTATAACGTGCTACCTGATAGCTTTCCTTCTTTCT TTATTCTCGAATAATTTTTTTATCCCAGAAAAAAGGCTTATTAGCTCGTATTCATTTAATAAATAAATATTTTGAACCTT TTCCGGGGTTGATCCTTTTTTATACCAACATTTTTGCAGTAAACCTTTGCCACTTGAGCTCAGCCCAAGTACCTTGAAAT TTTGATACTGACACTTACATGTTAATTCCAGTTTGTTGACTATTGTGGAACCATACATGATGTAAAGAAGGCATGGAATC GGCACATGAAGTTATTCCCAGGCTCTACCAGGATAGATTTTCGTCATCAATCAGCTAAATGTCAAGGATCTCTAAATTTG ATTCAGCACAAGCGAGAAGAGGTTTTGGTTGCCTTACCTAATCAAGCATCTAGGGATTCTAGTTCTGACATGCATGCAAA TTTACCTCAAGAAAACAGGAAAGTGTCATCAGAGTATTGTGATACCCAGTTGGATCCTACTGCTGATGAATTGAATCATA TTACTCAGTCTAATGATACAGATATGCACGGGCTTCAAATCATGGAATCGGATGACAAAGCAGGAAATAATGGAAGGGAT TTGGCTCTCCCTGAGGAACCAAGGGACAATGGTCCTGAAAATAAGTTGCCGTCTGCAGATTTAGTGGAAGTGGAAGAGGA ACCTGGTCTAGTTGATAAGAATTTAAAAAGAAATTGTTCTGAATCTGACGTTTCATCTGAAAATTTATTACAGCAAACAG CCAGTGGAAATAAATCTTTGAAAGCATCCTCGAATGAGAATGCTGTCTTCTCTCAGTGTGAGCTTGAGACTGAAGAATTG AACCCCCGGGAGAGCACATGCCCTGATTCGGAACTGATGACATCTCAGGAGGAGTGTGACACAATTCCAGAAAGGAGCAA GTTGAATAGTAGAACGGTGGCGGGTGGTCATACTTCAAATCAAGACAACTCTGCTAGCACTCAAGACTCTGAATCTGCTC AAACTCATGTTGAAATAAACAATTCATATTCAGCATGCCATCAAGACGAGAGAGCTAGAAGATCACTTCTACCACCCCGG TTTTCTAGAAATAGTGATGGAAAGTGGCATCAGAAAAGAAATACCGGTAACTTTCGCCGAGGTCACAAATATGGTCATCG AGAATACACACACAGAAAACAGCACCAACAGCAGCAGCTGCCTCCACAACAATTCCATCCAGCTGGAGGGGGACCACAAT TGCCTGTCACTCCAGGTTACGCCCAATCGGAAATGCAAGCCCAGCAATTCAATCAAGGACAAACTCAATTTCAAGCCACT TCTACTCCTGCTGATTTTGTTGCAACTCATAGTTGGCCTATACAAAACATTCCGATACAGAATTCTTTATCTCAGTCTCA GTCACCAGCCAATATCACATCACATGTATTTCAACATCCAATGCAAGGCAATGTACAATATGGATATATGCAGAATGGCC AAGAACATAATCAGATGTGGCAGCAGTATTACTACCAACAGCAGCAGCAGCAGTTGCAACTACAACAACATTATATGCAA TTGCAACAACAATCAACCCAGCAGGAACAGTCACAGCAACTTCAACAACACGGTCAATTGGTTCAACCACAACAGTTGCA ACAACAACCATTCCAGCTGGAACAGTCACAGCAACTTCAACAACATAATCAACTAGTTCAACCACAACAGTTGCAACAAC AATCATTCCAGCTGGAACAGTCACAGCAACTTCAACAACATAGTCAACTGGTTCAACCGCAACAGCTGCAACAACAATCA TTCCAGGCGGAACAATCACAACAACTTCAACAACAGAGTCAACTGGTTCTACCACAAAGGTTGCAACAACAATCATTCCA GGTGGAACAATCACAACAACAACATAGTCAACTGGTTCAACCACAACAGTTGCAACAATTGCTGTTACAGCAACAGTTTC TGCAGCAGCAGCAATATTTTCAACAGCTACAACAACAGCAACAAGAGCATCCTGTTTACCTTCAGCAGCAACAGCCATCA ACACAGGTACAGGCAGCGTTGAAACTAAAGGTTTTTTAGTATGGAAGTAGGAATAAGTGAACACTGATGAATTTCATGAT ATAAGATTGATTTGGTGTGTTTAAAATACAAAATACTGAAACTTGTTTACCCCAATAATTAGATCAAGTTTTACTTACGC ACTAGCAACTGCAAAACTGTCACATTATTTTCAGTTTGTTTCCTGTTTTCAAAATTTTGTATAGGAAGCAAAGGAAACAA GTTTTATTTTGTTTCTCTGTTTCTTATACAAACCTTTGAAAACAAAGAACAAACTGAAAATAATATAGCAGTTTTGTAAT ATAAATCTGAAAACAGTAAATGAAAATAAACCTAACAGGCTCTTATTTTCACCATATCCCATACAAAATCTTTGAAAACA AAAAGTAAAGCGAAATAAGGTGGGGTATTATAATTAATTATGAAAATGGAATGTTTTTTCAAACTAAATAGGCCTCTAGT TTCATGTATATATCATGAAGATTAATGGCATTTCTCATTTCGATTTCACTTGAATAGTATAGAAACTATACTGTCTCTAC TTATTATAGTCGATTTTCAACTTAAGCTGAGTGGAAGAGCCAGATTCTTGATGATCAGTTTTGTTACCTGTGGACCATAT TTCTTTGGACTCAATACTTCTTGTAAAATTCTAATTGTTTCTTTGCAATGGCAGAGCAACAACAGTCCTGTAGCAGACCA AGGGCAGGCAATAGTGACATCACAGGTTAGTTAAATCAAATTCTTAAGGAAAACAATTTGGTATCATAACTAGATAATCA GTAGTTTCTGTACCAAACAAAGATAATCAATTGTTTTGTGTTTGTTAACCCTCCGATCTTAATTGGCTGCATAAATGGCT ACTCTGGCCTTTACAAACATAAAATTTATCTCTGATTTTTTGGACTTTGGTCATGTAGAGCAATGAAGAGATAATGTCGC AACAATCAGGCGAACCTGGGTTGGTTTCTTCTCCTGTTCTGGATCATCCCCAAGAGGATTGACATTTCCTTGTAGATTTG ACATGTTTATGGTTGTAAAATTCAGAATTTACTCTGCGAAAACTTGGCACAAGGACACTGGATCCCAATATGAAATTCTT AGCAGCTTCCACCCAAAGCAAAAAATGGTCACAGTAATTTGCATTATAGTTAAAGAGTATGTTACAATTGTTTGGCCATC CTAGTGAGAGTTGATAAGTTCTGGTGACGCAGCTTCATATGTAAATAGAATTCTTAAGCACATTATAAGCCTTAAAAAGT CCATTTTGATAAATAGAATGATTAAGTTTATTTTCAGGAACCTTTATTTTGAGAATAAGATGTTCATTCCTTCGTGACTG AAAACTTACATTGGGCCAAAGCTGTATTTTAGGAAATGGTGAGTGGTTGAAAGCTAGCCTAAATTTAAATAGTTTAATTT GGACGATTCATGAACTTCTGAAAAAAATTAATAATGG
CDS sequence (LotjaGi4g1v0383300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGCTGTGCCCCACACTCTCATTCGCTACAGATGACAATGTGGAACTTGAAGATGTTGTTTCTAAGGGCTCATT AGCTTTTGATGAATGGACTATACTCATTTCAGAGATTGACAACACATATCCTGATAATGTGGAGAAAATATGTCTAGTTT ATGACCATTTCTTGTCCAAATTCCCGTTGTGTTATGGCTATTGGAGGAAGTATGCTGCCCACATGGCACGCTTATGCCCT GCAGATAAAGTTGTTGAAGTCTTTGAACAAGCTGTGTTAGCAGCAACATATTCAGTGGGCATGTGGGTTGACTACTGTAG CTTTGGTATGTTAGCTTTTGAGGAACCATCTGATATTCGGAGATTGTTCAAGAGAGCCATTTCCTTTGTTGGGAAGGACT ACTTATGTCATACCTTGTGGGATAAGTATATTCAATTTGAGTTTTCCCAGCAGCAGTGGATTTCTCTTGCTCACGTTTAT ATCCAAACTCTTAAGTTTCCAACCAAAAAGTTGCATCAGTATTATGATAGTTTTAAAAAGTTGGCAACCTTTTTGGAAGA GGGAATGACAAGCCTGGACAATTCTCCAAAGCAATTGCAATCTGAATCTTGTTTTGATGGAGAAATTCCTATGACTATGT GTTGCAAGGATGATGAGATTTATTGCATTATCAAGGATATGATGGATTCATCTGTTGGAATGGCTTGTTCAATAGCTGTA AAGAAGTACAGGGTTATTGGAGAACAGCTCTATCATAATGCTTGTGAGTTGTATTCAAAGATTAGTTCTTTTGAGGCTAA TATTGAGAGACATTACTTTCATGTTCAACCACTTGATGCAAAGCAATTGCAGAATTGGCATGATTATCTGGATTTTATTG AACTTCAAGGGGATTTTGACTGGGCTGTGAAACTTTATGAGAGATGCTTGATTGTGTGTGCCAACTATTGTGATTATTGG ATGCGTTATGTGGACTTCATGGAAGCCAAGGGAGGAAGAGAAATAGCAAACTACTCTCTAGATCGAGCCACCGAAATTTA TTTGAAGAGTGTGCCGGCAATCCATTCATTCAATGCTAGGTTTAAGGAACAGATAGGAGATGTTATAGCTTCCCGTGCTT TATATATTCAGAGGGGTAAAGGGACAGATTCAGACTTTGTGGAGAGTGTTAAATCTATAGCTAATATGGAAAAACGTTTG GGAAACATGGAGTCTGCTTTCAATATATACAAAGAAGCTCTAGAAATGGCTGCAGCTGAGGAAAAGCTACAAGCCCTTCC CCTTTTATATATTCATTTATCTCGGCTAAAATATATGAGTACAAACAGCGAGGATGCTTCAAGAGATGTCTTAATTGATG GTATCAGAACTTTGCCTCCAAACAAATTGCTTCTGGAGGAATTGATAAAGTTCTCAATGGTGCATGGAGGGACAAAGCAC ATAACTTTAATAGATACAATTATAGCTGATGCATTATCTCCAAGGTCTGATGAATCTCAAGGTCTGGGTACCGAGGATGC TGAGGATATATCAAAGTTATACCTAGAGTTTGTTGACTATTGTGGAACCATACATGATGTAAAGAAGGCATGGAATCGGC ACATGAAGTTATTCCCAGGCTCTACCAGGATAGATTTTCGTCATCAATCAGCTAAATGTCAAGGATCTCTAAATTTGATT CAGCACAAGCGAGAAGAGGTTTTGGTTGCCTTACCTAATCAAGCATCTAGGGATTCTAGTTCTGACATGCATGCAAATTT ACCTCAAGAAAACAGGAAAGTGTCATCAGAGTATTGTGATACCCAGTTGGATCCTACTGCTGATGAATTGAATCATATTA CTCAGTCTAATGATACAGATATGCACGGGCTTCAAATCATGGAATCGGATGACAAAGCAGGAAATAATGGAAGGGATTTG GCTCTCCCTGAGGAACCAAGGGACAATGGTCCTGAAAATAAGTTGCCGTCTGCAGATTTAGTGGAAGTGGAAGAGGAACC TGGTCTAGTTGATAAGAATTTAAAAAGAAATTGTTCTGAATCTGACGTTTCATCTGAAAATTTATTACAGCAAACAGCCA GTGGAAATAAATCTTTGAAAGCATCCTCGAATGAGAATGCTGTCTTCTCTCAGTGTGAGCTTGAGACTGAAGAATTGAAC CCCCGGGAGAGCACATGCCCTGATTCGGAACTGATGACATCTCAGGAGGAGTGTGACACAATTCCAGAAAGGAGCAAGTT GAATAGTAGAACGGTGGCGGGTGGTCATACTTCAAATCAAGACAACTCTGCTAGCACTCAAGACTCTGAATCTGCTCAAA CTCATGTTGAAATAAACAATTCATATTCAGCATGCCATCAAGACGAGAGAGCTAGAAGATCACTTCTACCACCCCGGTTT TCTAGAAATAGTGATGGAAAGTGGCATCAGAAAAGAAATACCGGTAACTTTCGCCGAGGTCACAAATATGGTCATCGAGA ATACACACACAGAAAACAGCACCAACAGCAGCAGCTGCCTCCACAACAATTCCATCCAGCTGGAGGGGGACCACAATTGC CTGTCACTCCAGGTTACGCCCAATCGGAAATGCAAGCCCAGCAATTCAATCAAGGACAAACTCAATTTCAAGCCACTTCT ACTCCTGCTGATTTTGTTGCAACTCATAGTTGGCCTATACAAAACATTCCGATACAGAATTCTTTATCTCAGTCTCAGTC ACCAGCCAATATCACATCACATGTATTTCAACATCCAATGCAAGGCAATGTACAATATGGATATATGCAGAATGGCCAAG AACATAATCAGATGTGGCAGCAGTATTACTACCAACAGCAGCAGCAGCAGTTGCAACTACAACAACATTATATGCAATTG CAACAACAATCAACCCAGCAGGAACAGTCACAGCAACTTCAACAACACGGTCAATTGGTTCAACCACAACAGTTGCAACA ACAACCATTCCAGCTGGAACAGTCACAGCAACTTCAACAACATAATCAACTAGTTCAACCACAACAGTTGCAACAACAAT CATTCCAGCTGGAACAGTCACAGCAACTTCAACAACATAGTCAACTGGTTCAACCGCAACAGCTGCAACAACAATCATTC CAGGCGGAACAATCACAACAACTTCAACAACAGAGTCAACTGGTTCTACCACAAAGGTTGCAACAACAATCATTCCAGGT GGAACAATCACAACAACAACATAGTCAACTGGTTCAACCACAACAGTTGCAACAATTGCTGTTACAGCAACAGTTTCTGC AGCAGCAGCAATATTTTCAACAGCTACAACAACAGCAACAAGAGCATCCTGTTTACCTTCAGCAGCAACAGCCATCAACA CAGAGCAACAACAGTCCTGTAGCAGACCAAGGGCAGGCAATAGTGACATCACAGAGCAATGAAGAGATAATGTCGCAACA ATCAGGCGAACCTGGGTTGGTTTCTTCTCCTGTTCTGGATCATCCCCAAGAGGATTGA
Protein sequence (LotjaGi4g1v0383300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAALCPTLSFATDDNVELEDVVSKGSLAFDEWTILISEIDNTYPDNVEKICLVYDHFLSKFPLCYGYWRKYAAHMARLCP ADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIRRLFKRAISFVGKDYLCHTLWDKYIQFEFSQQQWISLAHVY IQTLKFPTKKLHQYYDSFKKLATFLEEGMTSLDNSPKQLQSESCFDGEIPMTMCCKDDEIYCIIKDMMDSSVGMACSIAV KKYRVIGEQLYHNACELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYCDYW MRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNARFKEQIGDVIASRALYIQRGKGTDSDFVESVKSIANMEKRL GNMESAFNIYKEALEMAAAEEKLQALPLLYIHLSRLKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKH ITLIDTIIADALSPRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLFPGSTRIDFRHQSAKCQGSLNLI QHKREEVLVALPNQASRDSSSDMHANLPQENRKVSSEYCDTQLDPTADELNHITQSNDTDMHGLQIMESDDKAGNNGRDL ALPEEPRDNGPENKLPSADLVEVEEEPGLVDKNLKRNCSESDVSSENLLQQTASGNKSLKASSNENAVFSQCELETEELN PRESTCPDSELMTSQEECDTIPERSKLNSRTVAGGHTSNQDNSASTQDSESAQTHVEINNSYSACHQDERARRSLLPPRF SRNSDGKWHQKRNTGNFRRGHKYGHREYTHRKQHQQQQLPPQQFHPAGGGPQLPVTPGYAQSEMQAQQFNQGQTQFQATS TPADFVATHSWPIQNIPIQNSLSQSQSPANITSHVFQHPMQGNVQYGYMQNGQEHNQMWQQYYYQQQQQQLQLQQHYMQL QQQSTQQEQSQQLQQHGQLVQPQQLQQQPFQLEQSQQLQQHNQLVQPQQLQQQSFQLEQSQQLQQHSQLVQPQQLQQQSF QAEQSQQLQQQSQLVLPQRLQQQSFQVEQSQQQHSQLVQPQQLQQLLLQQQFLQQQQYFQQLQQQQQEHPVYLQQQQPST QSNNSPVADQGQAIVTSQSNEEIMSQQSGEPGLVSSPVLDHPQED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 944 | 932 | 0.0 | – | |
| PANTHER | 13 | 944 | 932 | 0.0 | – | |
| Gene3D | 18 | 189 | 172 | 4.1E-31 | ||
| SUPERFAMILY | 19 | 192 | 174 | 1.66E-23 | ||
| SMART | 45 | 77 | 33 | 0.011 | ||
| SMART | 79 | 111 | 33 | 230.0 | ||
| SMART | 114 | 149 | 36 | 0.052 | ||
| SUPERFAMILY | 248 | 541 | 294 | 7.82E-31 | ||
| Gene3D | 276 | 565 | 290 | 1.0E-37 | ||
| SMART | 297 | 329 | 33 | 3.6E-4 | ||
| MobiDBLite | 574 | 596 | 23 | - | – | |
| MobiDBLite | 629 | 858 | 230 | - | – | |
| MobiDBLite | 629 | 679 | 51 | - | – | |
| MobiDBLite | 680 | 713 | 34 | - | – | |
| MobiDBLite | 745 | 785 | 41 | - | – | |
| MobiDBLite | 813 | 829 | 17 | - | – | |
| MobiDBLite | 1110 | 1153 | 44 | - | – | |
| MobiDBLite | 1110 | 1165 | 56 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
Expression pattern of LotjaGi4g1v0383300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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