Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0388200 |
| Transcript ID | LotjaGi4g1v0388200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|G7L8V2|G7L8V2_MEDTR Cysteine-rich RLK (Receptor-like kinase) protein; Found in the gene: LotjaGi4g1v0388200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76657904..76660872) extracted from Lotus japonicus Gifu genome v1.2.
CTCCACTTCCCTGTACTCATTCTCTCCTGTCAGGTGGGTCGCTCTGCGCCTCACAGCCTTCTCCACTTCACATGGCGGAA ACCGCCGCTACACATCTCAATACCTCACCATTCCTCTCGATTTTGACAGGTGATTCCTCCTTCTTTCCACTCCGTGATTC ACATATTTTGTTCCATTTCAACTGTTGTGGAGTGGGGAATCACGCAGCAAAATGTGATTTTGAATTTTGTAGTTTACTTT TTGTTTTGTTTTGAATTTCTTTTAATATGGATGAGCTTAGTTGATAGCAAGACCCATGTTATAATGAATTTCATTTTGGT AAATGGACTTGCAATTTGGAACTAGTCTATGAAGCATTTATGTGATGTAGGACCTTTAGAAATAGTCTATGAAGAGTTTC TGTGATGTAGTAGAACCTTTAGAACTAGTCCATGAAGAAGCTTTATTGTGGCACACAGAATCATGCCGTTTCTGCTTCAA ACAGTTTTTCAAACATAGGGTGACCATCAATGAGTCAATTAAATTCTACCCCAGTATATTATATATACTACATATATATG CTTATCAAAAAAAAAAAAAATATACTACATATATATAGTCAAAGTTCGTTAAGTCCAGTCACCCTACGACTATTTTCAGA TTCAAAATTTAGTCAAAGTTAGTTAAGTCTCTTCATCCCTCCCCCATGGTGTGTTGTGTGGAGACCAAACATGATAATTC TTCCCTCGCACTCGTGCTGCATTGCCAACTGAGCTACCTCTTGTGTTGACCAACCCTGAACCTTGGTATGGTTAAGCAAT GATTGAAGAGTGTTTCTATCTATGCATTAACTGTTCATAAGCCATTCTCCACTACATGCATAAATAGAGCAAAAACATGT AGCTTCAACACCAAGAGTTATGCACTATATGGAGTCCATTTTTGTGTTTCTTCTGATCTTTGTTGTGTCTCCAGATCTAG GCTCAGCTGCACCCTCACCCTCTACCAATAACTCTATGTGTCCAGTGTCCATGAATTATGTGTTAACAGTCCCTTGGAAC ACCTCTACCTGCCAAAACTTCCAACCCTTCCCATCCAAAAACCAAACACAGACAAGCCAATGTTGCCAAACCCTCTTGTC CCTCTTTGGCATAGCACTAGCAGAAAACCTCAAGAGAAACTCCCTTTTCCAACTCCCCAACCTCCCTACCTCTATCTCAT GCCTTCAAGACTTCCAATTCAAACTCAATTCCCTCTCACTTCCCAAAACCCTTGCTTCCTCCTGCTTTGACCCACTTCAA TTTGTCATCACTCCCAACATCTGTGCTCATATTCAATCCAAGCAAGATTGGCTCAACAGGCTTGGTCCAGATAACATAGC ACTGGTTAACACTGCCTGTAAACCAGACCTCAATGTTCTCACCAATTGCGGCGCGTGTGTGGATGAAGGGCTCAAGGTTC TGCAGAAGCTCACTGCCATGGATGGGAACACTTCCCATTCCAATGATTGCTTTTACTTCACAATACTTTATATTGCTGGA GTTGTGAATGAGTTTGGGCCTGAAAGCACAGGGACTATGTCTTGCGCTTTGGAATTGCCTCTTAATTCTGATTTAAGTTC CAGAAACAAGAGCCATTATCATCTTGCTCTTGTGTTTGGGTTAACTGGAGCTTCAGTTTCCTTCCTGGTTATCATGTTTG GGTTTTGTTTTTGGTACACTAAATGGATGAAGAGGAACAAAATTGAAAATTTGCAAACCTTTGCTAATGATCTAGAGGAA CAAAGGTCCAACTTTAGATTGAGACCACAGACAGGGTCCATTTGGTTCAAGTTTGAAGATCTTGACAAGGCCACTAACAA GTTTTCACCTCAGAATTTCATTGGTAAAGGTGGATTTGGGTCAGTTTACAAGGGCATTCTGCCTGATTGTGAAATTGTCG CAGTGAAAAGGATTGAAGAATCTGATTTTCAAGGAGATGCTGAATTCTACAGAGAGGTGGAGATTGTTAGCAGCTTGAAG CACCGCAATCTGGTGCCGCTAAGAGGGTGTTGTGTGGTTGATGAAGATGATAATCATGAGTACGGAAGGAAAACAAGGTA TCTTGTTCATGATTATATGTCCAATGGTAGCCTTGAAGACCATCTCTTTCCACACTTGGACAGTGAAAATGAAAAGAAAA CTCTGACATGGCCTCAAAGAAAAAGCATAATCTTGGATGTGGCAAATGGGTTGGTTTATTTGCACTGTGGAGTTAAACCT GCTATTTATCACAGAGATATCAAGCCCACCAATATATTACTTGATGCATGTATGAGGGCAAGGGTTGCTGATTTTGGACT GGCCAAACAGAGCAGTGAAAGCAGGTCTCAGCTAAATACTAGAATAGCAGGAACTCATGGATATTTAGCCCCAGAATATG CATTGTATGGTCAGTTAACTGAGAAGAGTGATGTCTATAGTTTTGGTGTGGTTATTTTGGAAATAGTGTGTGGAAGAAAA GCTCTTCAGTTGTCTTCATCTGGTACACCAGCTTTCTTGATCACAGATTGGGTTTGGTCATTGATGAAATCTGGTCACAT AGAAGAGGCTTTGGATGCTTCTCTCATGATAGATGGAAATTCCTCATCTAGAAACATAATGGAGAGATTTTTGTTGGTTG GAATTCTTTGTTCTCATTTAATGGTTGCTTCCAGGCCAACTACTTTGGAGGTTTTGAAGATGTTAGAAGGGGACCTTGAG GTTCCATCAATTCCTGATAGGCCAATGACTCTTGGGCAACACATGTTTTCCAATGCTGATTCAACAGAATGGTGAAAAAC AAGATGTAATGGTTGCTAGCAATCAAATTAAATTGTGACCCTAATAAGTGAATTTTACTTGCAAAGTAAGACTTCAAATT ACATTATTACCACCTTGTGAATGACACTGTTTAATTACCACTCTTGAACGGATTTCAGTTACCTACAGTGAAGGATACCT TACATTCAC
CDS sequence (LotjaGi4g1v0388200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAACCGCCGCTACACATCTCAATACCTCACCATTCCTCTCGATTTTGACAGATCTAGGCTCAGCTGCACCCTC ACCCTCTACCAATAACTCTATGTGTCCAGTGTCCATGAATTATGTGTTAACAGTCCCTTGGAACACCTCTACCTGCCAAA ACTTCCAACCCTTCCCATCCAAAAACCAAACACAGACAAGCCAATGTTGCCAAACCCTCTTGTCCCTCTTTGGCATAGCA CTAGCAGAAAACCTCAAGAGAAACTCCCTTTTCCAACTCCCCAACCTCCCTACCTCTATCTCATGCCTTCAAGACTTCCA ATTCAAACTCAATTCCCTCTCACTTCCCAAAACCCTTGCTTCCTCCTGCTTTGACCCACTTCAATTTGTCATCACTCCCA ACATCTGTGCTCATATTCAATCCAAGCAAGATTGGCTCAACAGGCTTGGTCCAGATAACATAGCACTGGTTAACACTGCC TGTAAACCAGACCTCAATGTTCTCACCAATTGCGGCGCGTGTGTGGATGAAGGGCTCAAGGTTCTGCAGAAGCTCACTGC CATGGATGGGAACACTTCCCATTCCAATGATTGCTTTTACTTCACAATACTTTATATTGCTGGAGTTGTGAATGAGTTTG GGCCTGAAAGCACAGGGACTATGTCTTGCGCTTTGGAATTGCCTCTTAATTCTGATTTAAGTTCCAGAAACAAGAGCCAT TATCATCTTGCTCTTGTGTTTGGGTTAACTGGAGCTTCAGTTTCCTTCCTGGTTATCATGTTTGGGTTTTGTTTTTGGTA CACTAAATGGATGAAGAGGAACAAAATTGAAAATTTGCAAACCTTTGCTAATGATCTAGAGGAACAAAGGTCCAACTTTA GATTGAGACCACAGACAGGGTCCATTTGGTTCAAGTTTGAAGATCTTGACAAGGCCACTAACAAGTTTTCACCTCAGAAT TTCATTGGTAAAGGTGGATTTGGGTCAGTTTACAAGGGCATTCTGCCTGATTGTGAAATTGTCGCAGTGAAAAGGATTGA AGAATCTGATTTTCAAGGAGATGCTGAATTCTACAGAGAGGTGGAGATTGTTAGCAGCTTGAAGCACCGCAATCTGGTGC CGCTAAGAGGGTGTTGTGTGGTTGATGAAGATGATAATCATGAGTACGGAAGGAAAACAAGGTATCTTGTTCATGATTAT ATGTCCAATGGTAGCCTTGAAGACCATCTCTTTCCACACTTGGACAGTGAAAATGAAAAGAAAACTCTGACATGGCCTCA AAGAAAAAGCATAATCTTGGATGTGGCAAATGGGTTGGTTTATTTGCACTGTGGAGTTAAACCTGCTATTTATCACAGAG ATATCAAGCCCACCAATATATTACTTGATGCATGTATGAGGGCAAGGGTTGCTGATTTTGGACTGGCCAAACAGAGCAGT GAAAGCAGGTCTCAGCTAAATACTAGAATAGCAGGAACTCATGGATATTTAGCCCCAGAATATGCATTGTATGGTCAGTT AACTGAGAAGAGTGATGTCTATAGTTTTGGTGTGGTTATTTTGGAAATAGTGTGTGGAAGAAAAGCTCTTCAGTTGTCTT CATCTGGTACACCAGCTTTCTTGATCACAGATTGGGTTTGGTCATTGATGAAATCTGGTCACATAGAAGAGGCTTTGGAT GCTTCTCTCATGATAGATGGAAATTCCTCATCTAGAAACATAATGGAGAGATTTTTGTTGGTTGGAATTCTTTGTTCTCA TTTAATGGTTGCTTCCAGGCCAACTACTTTGGAGGTTTTGAAGATGTTAGAAGGGGACCTTGAGGTTCCATCAATTCCTG ATAGGCCAATGACTCTTGGGCAACACATGTTTTCCAATGCTGATTCAACAGAATGGTGA
Protein sequence (LotjaGi4g1v0388200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAETAATHLNTSPFLSILTDLGSAAPSPSTNNSMCPVSMNYVLTVPWNTSTCQNFQPFPSKNQTQTSQCCQTLLSLFGIA LAENLKRNSLFQLPNLPTSISCLQDFQFKLNSLSLPKTLASSCFDPLQFVITPNICAHIQSKQDWLNRLGPDNIALVNTA CKPDLNVLTNCGACVDEGLKVLQKLTAMDGNTSHSNDCFYFTILYIAGVVNEFGPESTGTMSCALELPLNSDLSSRNKSH YHLALVFGLTGASVSFLVIMFGFCFWYTKWMKRNKIENLQTFANDLEEQRSNFRLRPQTGSIWFKFEDLDKATNKFSPQN FIGKGGFGSVYKGILPDCEIVAVKRIEESDFQGDAEFYREVEIVSSLKHRNLVPLRGCCVVDEDDNHEYGRKTRYLVHDY MSNGSLEDHLFPHLDSENEKKTLTWPQRKSIILDVANGLVYLHCGVKPAIYHRDIKPTNILLDACMRARVADFGLAKQSS ESRSQLNTRIAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIVCGRKALQLSSSGTPAFLITDWVWSLMKSGHIEEALD ASLMIDGNSSSRNIMERFLLVGILCSHLMVASRPTTLEVLKMLEGDLEVPSIPDRPMTLGQHMFSNADSTEW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 240 | 240 | - | – | |
| PANTHER | 22 | 626 | 605 | 9.8E-203 | – | |
| PANTHER | 22 | 626 | 605 | 9.8E-203 | – | |
| Phobius | 241 | 267 | 27 | - | – | |
| TMHMM | 245 | 267 | 23 | - | – | |
| Phobius | 268 | 632 | 365 | - | – | |
| Coils | 276 | 296 | 21 | - | – | |
| Gene3D | 277 | 400 | 124 | 3.9E-30 | – | |
| SUPERFAMILY | 296 | 604 | 309 | 3.28E-74 | ||
| ProSiteProfiles | 316 | 612 | 297 | 36.541 | ||
| SMART | 316 | 603 | 288 | 2.7E-30 | ||
| Pfam | 319 | 535 | 217 | 3.0E-44 | ||
| ProSitePatterns | 322 | 344 | 23 | - | ||
| CDD | 322 | 605 | 284 | 2.66079E-91 | – | |
| Gene3D | 401 | 610 | 210 | 2.1E-54 | – | |
| ProSitePatterns | 450 | 462 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0388200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…