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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0388300 |
| Transcript ID | LotjaGi4g1v0388300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G11050.1 Protein kinase superfamily protein; Swiss-Prot: sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050; TrEMBL-Plants: tr|A0A151UBV5|A0A151UBV5_CAJCA Putative LRR receptor-like serine/threonine-protein kinase RKF3; Found in the gene: LotjaGi4g1v0388300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76662422..76664787) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAAAGTTTGTGCATTTAGTGGCAGAACCCCACTTGCTACTAAAATAGAATGAAATTGTCTAGTATCCACCCAACTTC AATACACACACAGCTTTTATAGACTTCTCCTAAAACATGAGATCTATGTCTATTTCTGTAGTTCTTGTCTTCATCTTTGT CGTGTCTTTAGATCCAGTTTTCTCACTGAATCTTGCACCCTCTCCTTCACCACCCTCTACCAATGAATCTACATGTCCAG TGTCCATGAAATATGTCCAAACTGTTGCTTGGAACTCCTCTTCCTGCCATAACTTCCAACCTTTGCAATCCAAAAAAGAC ACACATGAAACAATCTGTTGCCAAAACCTCTTGTACCTCTTTGGCATAGCACTAGCTGAAAATCTCAAGAAAAACTCTCT TTTCCAGCTCCATAACCTCTCCACCTCAATCTCTTGCCTTCAGGATTTCCAATCCAATATCTCTTCAATCTCACTTTCCA ATAACCTTGTCAACTCTTGCTTTGAGCCAAGTGAGTTTGTCATCACTCCAAATTTATGTGCCCAGATTCAAACTAAGCAA GATTGGGTTAACAGGGTTGGTTCTGCTAACACAGAACTGGTTAACTCTGCTTGTGCAACAGACCTCACTGATGTTGCTCA GTGCAGAAAGTGTATGGCTGAGGGGGACAAGGTTCAGCAGATTCTGGTTTCCATTGATGGTAATCCTTCACATTCCCAAG ATTGCTTTTACTTTCTAGTGCTTTATATTGCTGGAGTTGTGAATAGGTTTGGACCTCAGAGCCAAGGTGTTTTGTCTTGC ATTTTTACTTTGTTGGTTAGTTCACATGAGGATTCCAGAGAGGAGCATGACCACCATGTTCTTGTGATTGCTTTAGCAGC TTCATTTGGATTATTTCTGTTCATCTTGTTAGGGTTGTGTTTTTGGTACTACACTAGGTGGGTGAAGAGAAAAAAATTTG AAAATTTGCTGGACTCTGGTGGTGGACCAGAGGAACTAAGGTTTAACCAGAGATTGAGACCGAACACTGGGTTGATTTGG TTCAAGTTTGAGGACCTTGTTAAGGCTACCAACAATTTTTCAGCTGAGAATTTCATTGGGAGAGGCGGGTTTGGGACGGT TTACAAGGGCACTCTACCTGATTGTAAAATTGTCGCAGTGAAAAGGATTGAAGAATCTGATTACCAAGGAGATGCTGATT TCTGCAGAGAGGTGGAGATTGTTAGCAGCTTGAAGCACCGCAATCTGGTGCAGCTAAGAGGGTGTTGTGTTGTTGATGAG GGTGAGAATTCTGAGTATAAAGGAAGGTATTTAGTTCTTGAATACATCCCAAATGGTAGCCTTAAAGACCATCTATTTCC AACAACCATGGATGATCCAAATGCAGTGAAATTGACTTGGCCTCAAAGGAAAAACATAATCTTGGATGTTGCAAACGCGT TGGTTTATTTGCACTATGGAGTTAAACCTGCTATTTATCACAGAGATATCAAACCCACCAATATACTACTTGATGCGGGT ATGAGGGCAAAGGTTGCTGATTTTGGGCTAGCTAAACAGAGCAATACTGAAAATAAGTCTTTTCTAAATACAAGAATAGT TGGAACTCATGGATATCTAGCCCCAGAATATGCACTTTATGGTCAGCTAACTGAGAAGACTGATGTGTATAGCTTTGGTG TGGTTGTTTTGGAGGTAATGTGTGGAAGAAAAGCTCTTGAGTTATCAGGAGCACCGACATTCTTGCTCACAGATTGGGTT TGGGCATTAATGAAATCTGGTCACATAGAAGAGGCTTTGGATCCTTCTATGTTAATAGATGGTAACTCTACTAGGAACAT AATGGAGAGGTTTTTGCTTGTTGGAATACTATCTTGTCATGTATTGGTTGCTTCAAGACCAACAATTTTGGAAGCTTTGA AGATGTTAGAAGGGGATATTGAGGTTCCACCAATTCCAGATAGGCCAATGACTCTAGGGAATTATATGTTTTCAAAGGGT GATTGTTTGGGGATGAGCTCAGATTGTGATGTTAATGGTTGTAGAATCCACCCTTGATGAATTTGACAAGAACAAGTTGA GGGAAACTGTGTTCATGAATTTTTTTATTTTTTATATTAAAAACAAATTGATTTTTATGGATGAGATCCTATGCAATTTT CTAGAATTCAGATTTACTGTTGTTGACTGCAAGCCGTTCGATTAAGATTCGACAGATCATGTATTTATATTTTATTTACT GAGATCAAATATGAACAATCCAATCTAAATGCAATGACTTATATTGAGTGGCTGCCTCAAAAATAACTGCAGTTTATGCT TAAACATTAACAAATTTGATAAGAGTACATGACTATACAATTATAC
CDS sequence (LotjaGi4g1v0388300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATCTATGTCTATTTCTGTAGTTCTTGTCTTCATCTTTGTCGTGTCTTTAGATCCAGTTTTCTCACTGAATCTTGC ACCCTCTCCTTCACCACCCTCTACCAATGAATCTACATGTCCAGTGTCCATGAAATATGTCCAAACTGTTGCTTGGAACT CCTCTTCCTGCCATAACTTCCAACCTTTGCAATCCAAAAAAGACACACATGAAACAATCTGTTGCCAAAACCTCTTGTAC CTCTTTGGCATAGCACTAGCTGAAAATCTCAAGAAAAACTCTCTTTTCCAGCTCCATAACCTCTCCACCTCAATCTCTTG CCTTCAGGATTTCCAATCCAATATCTCTTCAATCTCACTTTCCAATAACCTTGTCAACTCTTGCTTTGAGCCAAGTGAGT TTGTCATCACTCCAAATTTATGTGCCCAGATTCAAACTAAGCAAGATTGGGTTAACAGGGTTGGTTCTGCTAACACAGAA CTGGTTAACTCTGCTTGTGCAACAGACCTCACTGATGTTGCTCAGTGCAGAAAGTGTATGGCTGAGGGGGACAAGGTTCA GCAGATTCTGGTTTCCATTGATGGTAATCCTTCACATTCCCAAGATTGCTTTTACTTTCTAGTGCTTTATATTGCTGGAG TTGTGAATAGGTTTGGACCTCAGAGCCAAGGTGTTTTGTCTTGCATTTTTACTTTGTTGGTTAGTTCACATGAGGATTCC AGAGAGGAGCATGACCACCATGTTCTTGTGATTGCTTTAGCAGCTTCATTTGGATTATTTCTGTTCATCTTGTTAGGGTT GTGTTTTTGGTACTACACTAGGTGGGTGAAGAGAAAAAAATTTGAAAATTTGCTGGACTCTGGTGGTGGACCAGAGGAAC TAAGGTTTAACCAGAGATTGAGACCGAACACTGGGTTGATTTGGTTCAAGTTTGAGGACCTTGTTAAGGCTACCAACAAT TTTTCAGCTGAGAATTTCATTGGGAGAGGCGGGTTTGGGACGGTTTACAAGGGCACTCTACCTGATTGTAAAATTGTCGC AGTGAAAAGGATTGAAGAATCTGATTACCAAGGAGATGCTGATTTCTGCAGAGAGGTGGAGATTGTTAGCAGCTTGAAGC ACCGCAATCTGGTGCAGCTAAGAGGGTGTTGTGTTGTTGATGAGGGTGAGAATTCTGAGTATAAAGGAAGGTATTTAGTT CTTGAATACATCCCAAATGGTAGCCTTAAAGACCATCTATTTCCAACAACCATGGATGATCCAAATGCAGTGAAATTGAC TTGGCCTCAAAGGAAAAACATAATCTTGGATGTTGCAAACGCGTTGGTTTATTTGCACTATGGAGTTAAACCTGCTATTT ATCACAGAGATATCAAACCCACCAATATACTACTTGATGCGGGTATGAGGGCAAAGGTTGCTGATTTTGGGCTAGCTAAA CAGAGCAATACTGAAAATAAGTCTTTTCTAAATACAAGAATAGTTGGAACTCATGGATATCTAGCCCCAGAATATGCACT TTATGGTCAGCTAACTGAGAAGACTGATGTGTATAGCTTTGGTGTGGTTGTTTTGGAGGTAATGTGTGGAAGAAAAGCTC TTGAGTTATCAGGAGCACCGACATTCTTGCTCACAGATTGGGTTTGGGCATTAATGAAATCTGGTCACATAGAAGAGGCT TTGGATCCTTCTATGTTAATAGATGGTAACTCTACTAGGAACATAATGGAGAGGTTTTTGCTTGTTGGAATACTATCTTG TCATGTATTGGTTGCTTCAAGACCAACAATTTTGGAAGCTTTGAAGATGTTAGAAGGGGATATTGAGGTTCCACCAATTC CAGATAGGCCAATGACTCTAGGGAATTATATGTTTTCAAAGGGTGATTGTTTGGGGATGAGCTCAGATTGTGATGTTAAT GGTTGTAGAATCCACCCTTGA
Protein sequence (LotjaGi4g1v0388300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSMSISVVLVFIFVVSLDPVFSLNLAPSPSPPSTNESTCPVSMKYVQTVAWNSSSCHNFQPLQSKKDTHETICCQNLLY LFGIALAENLKKNSLFQLHNLSTSISCLQDFQSNISSISLSNNLVNSCFEPSEFVITPNLCAQIQTKQDWVNRVGSANTE LVNSACATDLTDVAQCRKCMAEGDKVQQILVSIDGNPSHSQDCFYFLVLYIAGVVNRFGPQSQGVLSCIFTLLVSSHEDS REEHDHHVLVIALAASFGLFLFILLGLCFWYYTRWVKRKKFENLLDSGGGPEELRFNQRLRPNTGLIWFKFEDLVKATNN FSAENFIGRGGFGTVYKGTLPDCKIVAVKRIEESDYQGDADFCREVEIVSSLKHRNLVQLRGCCVVDEGENSEYKGRYLV LEYIPNGSLKDHLFPTTMDDPNAVKLTWPQRKNIILDVANALVYLHYGVKPAIYHRDIKPTNILLDAGMRAKVADFGLAK QSNTENKSFLNTRIVGTHGYLAPEYALYGQLTEKTDVYSFGVVVLEVMCGRKALELSGAPTFLLTDWVWALMKSGHIEEA LDPSMLIDGNSTRNIMERFLLVGILSCHVLVASRPTILEALKMLEGDIEVPPIPDRPMTLGNYMFSKGDCLGMSSDCDVN GCRIHP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 247 | 224 | - | – | |
| PANTHER | 31 | 626 | 596 | 7.5E-197 | – | |
| PANTHER | 31 | 626 | 596 | 7.5E-197 | – | |
| Phobius | 248 | 272 | 25 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 273 | 646 | 374 | - | – | |
| Gene3D | 292 | 403 | 112 | 1.1E-30 | – | |
| SUPERFAMILY | 301 | 605 | 305 | 2.16E-75 | ||
| SMART | 321 | 591 | 271 | 5.3E-35 | ||
| ProSiteProfiles | 321 | 613 | 293 | 36.555 | ||
| Pfam | 323 | 535 | 213 | 3.1E-45 | ||
| ProSitePatterns | 327 | 349 | 23 | - | ||
| Gene3D | 404 | 610 | 207 | 1.2E-51 | – | |
| ProSitePatterns | 453 | 465 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0388300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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