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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0395400 |
| Transcript ID | LotjaGi4g1v0395400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribosomal RNA small subunit methyltransferase F; TAIR: AT2G22400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q5ZLV4|NSUN2_CHICK tRNA (cytosine(34)-C(5))-methyltransferase; TrEMBL-Plants: tr|A0A0B2PBC2|A0A0B2PBC2_GLYSO tRNA (Cytosine(34)-C(5))-methyltransferase; Found in the gene: LotjaGi4g1v0395400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77357074..77366803) extracted from Lotus japonicus Gifu genome v1.2.
TGAGAGACGGAGAGGCCCAATAAACGCAACCCGCATGATTTGCGAAAACCCTACCAAAAAACCAAGAGCGTCACTCGTAA CTAACCAGTCGTGTGCCTCCAACTCGAAAGCCTCGTAGCAGAAAGAGTTAGTTACCGGCAACCATGGGCAGAGGAGGAAG GTCACGCACGCAGAGAAAGCATTTCCGCCAGAACAGAGAGAACGAGTGGAAGCGTTCCAAATCGGATCCCAACGCTTCCG AAACCCAAACTACACCATGGACTCCCTTCGCCACTGCGAACCCTTCCTTCGATGCCTACTACAAGGAGCAAGCTGTGGTG GCTCCCGATGAGTGGGATCAATTCGTCGCGTTTCTCAGAACTCCCTTGCCTGCTTCCTTCAGAATCAACTCCAGGTTCAA CCACCATTTCTCATTCATCGTTGCATTTTTGTTTGCTCTTATCTATCATATATTCACATGAATTCGTGTTTCGATTTGTT TGGTGATTGCAGTAGCCTGTTTGCTGACGACCTTCGCTCGCAACTGGAGAATGATTTCGTGCATTCTCTTCGTGCTGTGG TATGTTAGGTTCACTGCAGAAATGGCGGTTACAGAATTGCTACTGCTGTTTGTGATGTGTGTGTGTGTGTGTGATTAGAG TCTCTATTTTGTTGACTGTGAGTTGTTCCTTGTAGGTTCCTGAAGGGGTTGAGACTGAGGCTATTCGGCCATTGCCGTGG TATCCGGGGAACTTCGCTTGGCATTCGAATTTTTCTCGGATGCAGCTCAGGAAGAACCAAACACTTGAGAAGTAAGTGTA ATCTGAATGATCTACAAGTTGCATTTTATCGCGTTGCGTTTATAGAATTAGTGGATGCCATGTTTTTTAGGTTCTAGCTG CGCATTAGGACGTGAAGCGCCAATATCGCATCTATGGCATAATGACACGTTATGATTTTTTAATGTGTTGTTTGTGTGAT ATGTGAATCGTTGAATGGATTAACTGTGAAAAACGCCATCCTTAAGCCTTAACATTCTAACATTTTTCCTTTGCCATCTT ATTCTTACTTATACAGATATTTTAATTGATCTATCCATATGACTATCTAGTAATGGTATACTGAAGTTTTGCATGTTTAC CTTTTTAGGAAAGGATTTGGGACAAAGCAATGTAATTTCCTAAATTAAAAGAATAGTAAACAAACTACGTTTAGTTCGCA ATTCTTGCTCTTTGCATATGACTCGAGGAGGGGCGATTGCGCATTGTTATTTATGTATTCATTCTTATTTTACATATGTA CATACACACACGAGTGACATGACAACACATATATCATAATGCATGAACATGATGCTGCTAAACAATAAATTGACATGAAT CACACATATTACATGGTTATCTGATATGTCAATTGCTACCTCTGATGACACTAAATCTCACAGGTTCCATGAATTTTTAA AGCTAGAAAATGAAATTGGAAATATCACAAGACAGGAAGCTGTCAGTATGGTGGGTTACTTTCTCTACTCTTTCAATCTT TGGGGTCATGCAAAATGATCTTCTTTTATTTTTAGAATTCTTAATGGTTCAGTGCCTGTAGGTTACTGCTACTTTCGACT TTTCAAGAATTTAACTAATGTCAGTCTAATGATTGTTTTGAGACAGGTTCCTCCCCTATTCTTAGATGTGCATCCAGACC ATTTTGTACTTGATAGTAAGCAATTTCTAGTGTACAAAGTACTTTTTTGTTATTTTTACCTATTTTGACCAGCCTCTTGC TTAATTCAGAATTAAACTTTCTTTTCTTTGCTTCTGTTTAGTGTGTGCCGCACCAGGTTCAAAAACATTCCAATTGCTTG AGATTATACACCAATCAACTAAAGCAGGATCACTACCTGATGGAATGGTTTGTGTCGTTTTAAATAAAAAAACATTGCTG TCTCTCTTTGCTTTTATAACGCATTGGCGATTAGCAAAATCTTATTTGATTTTCTTGACTTTTTTTCTTATAATTAGGTT ATAGCAAACGATCTTGATGTACAAAGATGTAATCTTCTCATCCACCAAACGAAAAGAATGTGCACAGCCAACCTAATTGT TACCAATCACGAAGCGCAGAACTTCCCAGGATGCCGTTTAAATAGAAATCATGAACAGATGGAGTTAGATCACCATATTA ACCAACTACTATTTGATCGTGTTCTGTGTGATGTTCCATGTAGTGGAGATGGTACACTTCGTAAGGCACCTGATTTGTGG AGGAAATGGTAGTTTTTGCTCCTTTCTCCAAGCTCCAATTCCTTTTATACTCTTTTCAACCGTGGATTTTTTTATGACGT ATTTTGCATTTTTTGCAGGAACTCTGGGATGGGACATGGGCTTCATAGCCTACAAGTTCTAATTGCTATGCGAGGTACTT TTTCACTGTTTTGAATGTCTATTTGGGACCTGCCGATGCTAGGCTTGTGTTTCTGTTCCTTATACTGTATGGTTACAGTA CCCTTTTTTTCTGGTCCTTTTCAATTAGAAGATTGGTAATGGCCAACAGTGTTTGGCCATTTGCATGACTAGGATTTAAA TCCAGGGTCCCTCACTTGTAGACAAAATTTAATTCTAATGTAAATACTTTCTGAAGTAGGTAGATTGCCCTTCATTGGAA TGAGGATAGCCTCCCCTCACCCTAAAAATTCTTGTTATTGACCAGAATGCTTGACTATAAATTGAACTCAACTAGAACTT TCTAGCACGGGCAAGTAGGTCCAGTTATGGAAATTCCATGGTGACTTGAGCTTCATTTCCTTTTGTTTGGAATTGATCAT AAAGTTGAGTGGAATATTTTATCGTTCCGGATAATTTGCTTTGTGAATTATCATTCTATGCTTCTTCTCTGCTTATGTGA AAGAAAACTCTTACTTGCAATATGTTGAGCCTGAAGGCCCAGATAAGTAATTTCTCACATGTCATGTTGGTTGTGTCTTC TGAAATCGAAAGGCATTCTTTTACACGATGTAGATTAAATTTTTTGAAGACAGATGACGGGGGTTCAAAAACTGCTTCTT TGACATAGCTGAATAGAAATGAACTACTGTTTGAGAGACTTAGATTCTAGCAATCTCAACAACTAAATTGATTTTCTCAG GTTTATCTTTACTCAAAATTGGTGGAAGAATGGTTTATTCAACGTGCTCAATGAATCCTATTGAGAATGAAGCGGTGGTT GCAGAGGTAATCTACCTTAATGCTTTATAATTTGGCGCAGGCATGTTAGTGTGAGGTTTACTCTTAAAAGTGCTTTTATA TATTTAGATAAACTGTTTTCTTAGGCATACCTGTACATGTACAGGCAAGTCTTCAACCATTGGTGTGAGGGGGTGAAGAT GACCTTAGCCTTATAAGAACTACCTTGGCTAGTTGGCTATATACTTAGTGATCTAGTCTATATGTGGTAATTGGATATCA ACACAACCTTGTCAGTTGTCATGTGATTGGACATCTAGAGCGTGGAGTTTGTAGTATTGTCGCAAGGTCAGGATGACTGT TTTCGGCTGCTACGAGGCTGGGCTGCATAGGGATAGCCACAGGGCGAATATCAAAGATTGGGATAGGTTCTGATATCATA TTAGAATTCGGGCTCGGCTTTAGGGTTCCCCAAAAGCTTGCTCGAGGGGTTAGAATTGCCTAATACTTATCTCCAGTCTA TGTGAGATCTCAATTAATCTTGACTTATCACCCAAAATATGTCAGAAGTGAGGGGGTAGAGAACAGAATCATCAGATATA TATTGCAAATTGTCACAGCATCAATGCTAGAGTATAGAATTGCCACCACCAAAGATTGCAAACAGCCTTACTGAGCTTTT CTTGCAAATGAGAAATAGGAAGATCTTTAGCTGAATTGAGATACACATGAAAATATCCTGAGTAGCTTGCTCAACTCTTT TTTCTATTTTTTTGCAGGTTTTGCGTAGGTGTGGAGGATCTGTGAAACTTGTTGATGTCTCTAGTGAGCTTCCACAACTT ATTCGCCGGCCAGGTCTCAAGAAATGGAAGGTTTGTGTTTGCTGTGACCAACTGGCCGGTTTCTTTCTTTGAGAAGTCAG AGTTTTGATTATGTAATACTCACAATATTATAAAACAAATTTCTTGTCATAGTTACAATTAAAGAATACATCAGAATCGC TGCAATGCAAAACGTTTATAAATTAAAATAAGATATTTATTAATCTTCCAAGTGTTGAGCCAAACTGTTTATGTACTTTA ATACATATTAATAAATAATGAATAAGAAAGTAGTATAGACAATGTGTGAATTATTTCTATTGAAAATTCTGATATTCAAT CAGTTGGATGTCCATCATGTTAATGCCAACATTTACATCCATAGTAAAAAATGGAAAATTGAAGTTTTAAATTTTCAGAA CAGGAAAATTTTATATTTATCCAACTTGAACATGTATTCCAGCATAAGCTGCTAATTCTGCCTGTGATTCAGCTTGTGGC TTTAAACGTAGGTGTTGCGTTTGTTTTGTAGAGTATGCATTTGATTTTTTTTTAACGTGTTTGATTTTGGGGTTGCAGGT GTATGACAAGAGCACTTGGTTTGTCTCTTACAAAGATGTTCCTAAGTTTCGTGGAGGTGCAATTCTTCCCGGTATGTTTC CCTCTGGGAGACTTGATAACAGTAATCGTAATGTTGACATGGGAGACATTGCTAATGGTGCTAATGGAAATGCTGAAGAT TGTATTCAAGCTGTTGAGAATCCAGTGATGCCTGAGTCTGTTGAGGAAGTTTCTGATTTACCTCTAGAACATTGCATGAG GATAGTGCCGCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTTCTGCAAAAAGTTTCCCCTCTTCCAGGTAGTTTCT CATATTATTTTGTTCCTCTGTATCTGATTCTGTTAAAAGATAATCATGAGATTCTGGTGAACTTTGGGAAAATTTTCAAG TTGTATATGTTCATTAATTCACTTTGACAGACTTTTGCTTGCCATGATAGGTTTTTAATTATTTTTTTTTTGCAGCCATT CAAGAAAAGCCTAAAATAGACGTTGGTGGGAAATGTGCAGAACCAGCAAACCACAGTCTTCAGGATGCACAAGTACTGCA GATTAACTCATCAGAATGTGCAGATGAAGAAATCCTCGAAGAAGCTTCAGAGGAAAATGTAAATGACAATGAACCTGATA CAGAAGATTTGGAAGTTAGTCCTGTTCCAAATGAAGAGGACTCTAAGGAAACTGAAGAGCCCCATAATGTACAAAATGTG GAAAAGAAGATTCCAGGCAAAAGAAAGTTGCAGATTCAAGGGAAATGGAGAGGTGTTGACCCTGTCGTCTTTTTCAAGGA TGAAGCAATTATTAGTAGTATAAGGGATTTTTACGGAATCGATGAGAAATTTCCATTCAGTGGCCACCTTGTTACAAGAA ACGATGATACAAGTCATGTGAAAAGAATTTACTACATCTCCAAGTCAGTCAAGGATGTTCTTCAGTTGAATTTATCAGTT GGGCAGCAACTTAAAATTACCTCAGTTGGCCTGAAGATGTTTGTAAGTATACTTTTTCTCAATTCAGAGTCCAGAGATGA TGTTTTTGTTAAAATTCTCATTTTATGTGGTTTTATATTTATCATTCATGCTTTTATGCCCTTCACTGGCAGTGAGTAAT GGGCCTTTTTTATTAGTTCTTCTGAATAACTGTGAAATATGCTTGCCTTCATCTTACAGGAAAGACAAACAGCAAGACAA GGCAGCGATGCACCATGTGCTTTCCGAATATCATCTGAAGGGCTGCCCCTTATTCTCCCATACATCACCAAACAAATTCT ACAGGCATCACCTGCAGATTTCAAGCGTATTCTGCAGGACAAAGATGTAAAATTTGATGATTTTGCTGATGCTGAATTTG GCAAAAATGTGGCAAACCTATTGCCAGGCTGTTGTGTGTTAACTCTGGCTAAAGGTATGTTGTCAGTATCACTATGTTAT ACAAATGGTCGATACTCTACCCATTACAAAATACCATTACATGCATGTTTGGATTGGATACACGGTGGTTTTCACTGTGA ATCCTGAATCATGGTAGACAGAAACAACTTTCCTTAGCTTTTGTGGCAATCCACTGTGATTTTGGCTTCACCATAACATG CGCTACATTGACATCGGCATATCTGTTTATGGGGCCTTTGCTTTACTGCAGGGAACGAAGTTGCTACAGAGTCCCTCAAA GTGGATGAGTCAACAATAGCCATTGGATGCTGGAGGGGTAAGACGAGATTGACTGTGATGGTTACTGCCATGGATTGTCA AGAACTGCTTGAAAGGCTTTTAATACGTCTAGACACAGAAAATGGCTCCAACGGGCATGTAGACAAATCCTCTATTAATG CGAGTGAAGTACAGCCTTTACCGGAGTTGAACGGTGGAAATGAGGATGATGTAAAAGCTACTGTAAGCTAAAAAAGTGAC TATTTAGCTGATATTTAATACTCATTTGTAACACATTTTTATGATGATGCATACAAAAAATGGTGATTTTTTCCCCTTCA CCCATGTAACGATAGTGATGAAATTACTTGTTCTCGTCATTACTTTCTAAGATACAGACGTTTGTTACTGTTTGTATTAG TAATATTCTATGACTTTGAAAGTTTGCATGAATGGTTTGTATCATTTTTTATTTTTGGAAAGTCGTTCAAAGGGTATCCG AACGCAGAAGTTTACTTCCGGGCATAAAGTCGACAATTATATCTCCGTAGTATCCTTGGTAAAGGATTAATATACATGTT AATCTGATTGATGATCTGATGCTTACTAATTGTTGAGTTAAATCTTGTTTCGGATGAGCCTCTATCATGAAGTTTTAAGC CTAATAATATTGGTTCTGATTTGGAAAAAAACTTGTCCCTCAAACTCAATTTCAGGGGAATATCAGACAAATAGCCATAC CGGAAGATGAGCACGAATCATGAAATTTTCACATACAACAAAGTTTCAAGTTAAACCAATCCACGAACGAAACTTATGTA TATACTATATATACCAAGCAACTATATCCACCTCCGTTTTTGGTTCTTAACTCAGCAATCCAAACAAATTAAAATTAAAT GTTAAATGAAATGCGTCAAGCCTTTAAAAATTGGTAATAGGAATATCGAACCATCAAATAGACTACATTGAAACAAAATA CAAATGAAGTCAAGATGCCTGACAGCACATATTCCTCTTAGCAGGGATTTCCTGTGCAGGACCAGGGATGATAATTTTCT GACCAGACAAAGAAGCTGAGTTCCCATTTCCCTGAGATTCATCAGCAGCTAAGCTCTTCTTGTTGACAATGTTGTAGATT TCTGTCAAGACGGTTGTGAAGGCTGATTCAACATTAGTTGCTTCCAGTGCTGAGGTCTCCAGGAAAAACAAGCCTTCTTT CTCAGCAAATTCTTTTGCGTCCTCGGTCGGTACATCACGCTGGTTCACAAGATCACATTTGTTTCCTATGAGGATGATGA CTATGTTCTTGTCAGCATGGTTACGCAGTTCTTCTAGCCAACGGGGTATATGATCAAAGGTCTGGCGTTTAGTAATGTCA TAAACCAACATTGCTCCAACAGCACCCCTGTAATATGCACTTGTAACTGCTCTGTATCTGGAACATAAACCATTCAAATA TCAGGGCAACTAAATTTTGACTTAATATTCTGCATGCACTCACACGTCAAACAAGCGCAGCCGCACACGCAGGAAAAAAT GGTTCCTATCCTAAACATGGTTGATTACAAATAACTGGAAAAAGGGAAACATGTACAAAATAATTATGTTACCATGCACA AATTACCAATCAGAATAAATTTAACTTCCTTTCTACCAAATAAAAAATCATGTCAAATGACATAGTACTAAACCAAATTG TGCCTCATGTAAATGTACTTGATAAAAAAATTAAGAGTTATGAAACACTTATTATGAACCAATCTCCTAAAAGGATTGAG CTGATACAGAGTGAAAACTAATATTTTGCAAACTCACGGCCCCCTTCAAGTGTGAATAACTAGCGTAGATTGTCCATGGA GTCATTTCCATTAATAATGATCTATCACATAAAGACATCCGTATTTGTGTGTGCTAAATCTCAAGGAGCCTGAATTTTAA GCTAAGGTTTCTATATACTTAACATTGGGAAATCACCTATATGATGGAAAGGAAATTGATACATATTGCGAAAGAAACAC AAAGGAAGTTGATAGATTACTATGAAAAGAAACACGAGACCTATATCATACAAATTGACTCCTATGTTTCCTGTCAAAGA GAACGGCTATATTTGACACGTAATAGTTTCTTGCGTTTCGTTTATATTTTATTCGTAATATATAACAGGAGCTGCAATGC CAGAAATTTCGGATAACATACCACTACCGTAACCTAAAATAATAAACATAAATCTCCCACTTCTAAGCCACAAATAACAT CAATGCATACACAAGACAATGAATGAATTAAAGTCCTATTAAAATACTACATGCATTAAAAATAGCACAAAGATTGCTTA CATGTTAGAGTAACATGTTTTCACCTGCATCAATTGAAGTGCTACTACTAATAAACAATCCAAGTATATCCAACCATACC ATCATAGAAAACATGTGCTTATGACAAGAAACACAAAATCCTTCATGACTTGAAGCAAATCAATTACGATAATGGATTCG GATCCTCTAAAGTTCAAAATACAAGCATGACCAAAAGAATTCAATAATAAAAAATGTGATAAAGTACATGAACATACATA ATAATAAAAAAATCAATAATTAAGCCTGTGCTTATTACAACAAACACAAAATCCTTCATGACTTGAAGCAAATCAATTAC AATAATGGATTTGGATCCTCAAAGTTCAAAAACACAAGCATGACAAATAAAATCAATAATTAAATTTGTGATAAAATACA TGAACATGAACAATAAAAGTCGTTAAACATAAACTCATACAACAAAATAAACAGTTGCTAGATTCTCGATGAACAGTTAC AATTCTACACTTGTCTATACACATTTTTTTGACCACAAAGCATGATCGTTAGAGTAAGTAAACAACAGATCAAGTCAGTA ACCTCAATTATCATATAAACTCACTGAAACCACGCGATCCTTCATCATAATAACCAGATCAAACACGAAACGATGCTATA AACTGAAAAATTAAAATCGAAGATCGATGCAGGAAGCAAAGCTAGCTAGCTAAGTAGAAATAAAAGCGAAGCTACCTTTC TTGACCAGCAGTGTCCCAGATCTGAGCCTTGACGGTCTTGTGATCGATGACGAGAGTCCGAGTTTGGAATTCAACACCAA TCGTGGACTTGGAGTCCAAGCTGAACTCGTTCCTGGCGAATCTGGCTAGAATCTGTGACTTCCCGACCGCCGAGTCGCCA ATCAGCACCACCTTGAAGACGTAGTCTATCTTGGCGTTCGCATCGCCGTAGCCTCCTCCACTCGCCATTTTCGATCTTCC TTCCACTTTTTGCTTTTGCTTTTTCTTTTCTCTCTCACAAACAATCACTGTCTTTTTTTTCTTTCTCCTCTATTATCGCA CTTAATATATATAGTGTATCTCTCTCTGTTTCGTTGTTTGTTTGTGTCTATTGCTTCAAGGTTAAAACTAATTAAATGAA ATGGATTATCATGAAATGTTAACCATTAATAACACAAGCTCAACAGTTAA
CDS sequence (LotjaGi4g1v0395400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAGAGGAGGAAGGTCACGCACGCAGAGAAAGCATTTCCGCCAGAACAGAGAGAACGAGTGGAAGCGTTCCAAATC GGATCCCAACGCTTCCGAAACCCAAACTACACCATGGACTCCCTTCGCCACTGCGAACCCTTCCTTCGATGCCTACTACA AGGAGCAAGCTGTGGTGGCTCCCGATGAGTGGGATCAATTCGTCGCGTTTCTCAGAACTCCCTTGCCTGCTTCCTTCAGA ATCAACTCCAGTAGCCTGTTTGCTGACGACCTTCGCTCGCAACTGGAGAATGATTTCGTGCATTCTCTTCGTGCTGTGGT TCCTGAAGGGGTTGAGACTGAGGCTATTCGGCCATTGCCGTGGTATCCGGGGAACTTCGCTTGGCATTCGAATTTTTCTC GGATGCAGCTCAGGAAGAACCAAACACTTGAGAAGTTCCATGAATTTTTAAAGCTAGAAAATGAAATTGGAAATATCACA AGACAGGAAGCTGTCAGTATGGTTCCTCCCCTATTCTTAGATGTGCATCCAGACCATTTTGTACTTGATATGTGTGCCGC ACCAGGTTCAAAAACATTCCAATTGCTTGAGATTATACACCAATCAACTAAAGCAGGATCACTACCTGATGGAATGGTTA TAGCAAACGATCTTGATGTACAAAGATGTAATCTTCTCATCCACCAAACGAAAAGAATGTGCACAGCCAACCTAATTGTT ACCAATCACGAAGCGCAGAACTTCCCAGGATGCCGTTTAAATAGAAATCATGAACAGATGGAGTTAGATCACCATATTAA CCAACTACTATTTGATCGTGTTCTGTGTGATGTTCCATGTAGTGGAGATGGTACACTTCGTAAGGCACCTGATTTGTGGA GGAAATGGAACTCTGGGATGGGACATGGGCTTCATAGCCTACAAGTTCTAATTGCTATGCGAGGTTTATCTTTACTCAAA ATTGGTGGAAGAATGGTTTATTCAACGTGCTCAATGAATCCTATTGAGAATGAAGCGGTGGTTGCAGAGGTTTTGCGTAG GTGTGGAGGATCTGTGAAACTTGTTGATGTCTCTAGTGAGCTTCCACAACTTATTCGCCGGCCAGGTCTCAAGAAATGGA AGGTGTATGACAAGAGCACTTGGTTTGTCTCTTACAAAGATGTTCCTAAGTTTCGTGGAGGTGCAATTCTTCCCGGTATG TTTCCCTCTGGGAGACTTGATAACAGTAATCGTAATGTTGACATGGGAGACATTGCTAATGGTGCTAATGGAAATGCTGA AGATTGTATTCAAGCTGTTGAGAATCCAGTGATGCCTGAGTCTGTTGAGGAAGTTTCTGATTTACCTCTAGAACATTGCA TGAGGATAGTGCCGCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTTCTGCAAAAAGTTTCCCCTCTTCCAGCCATT CAAGAAAAGCCTAAAATAGACGTTGGTGGGAAATGTGCAGAACCAGCAAACCACAGTCTTCAGGATGCACAAGTACTGCA GATTAACTCATCAGAATGTGCAGATGAAGAAATCCTCGAAGAAGCTTCAGAGGAAAATGTAAATGACAATGAACCTGATA CAGAAGATTTGGAAGTTAGTCCTGTTCCAAATGAAGAGGACTCTAAGGAAACTGAAGAGCCCCATAATGTACAAAATGTG GAAAAGAAGATTCCAGGCAAAAGAAAGTTGCAGATTCAAGGGAAATGGAGAGGTGTTGACCCTGTCGTCTTTTTCAAGGA TGAAGCAATTATTAGTAGTATAAGGGATTTTTACGGAATCGATGAGAAATTTCCATTCAGTGGCCACCTTGTTACAAGAA ACGATGATACAAGTCATGTGAAAAGAATTTACTACATCTCCAAGTCAGTCAAGGATGTTCTTCAGTTGAATTTATCAGTT GGGCAGCAACTTAAAATTACCTCAGTTGGCCTGAAGATGTTTGAAAGACAAACAGCAAGACAAGGCAGCGATGCACCATG TGCTTTCCGAATATCATCTGAAGGGCTGCCCCTTATTCTCCCATACATCACCAAACAAATTCTACAGGCATCACCTGCAG ATTTCAAGCGTATTCTGCAGGACAAAGATGTAAAATTTGATGATTTTGCTGATGCTGAATTTGGCAAAAATGTGGCAAAC CTATTGCCAGGCTGTTGTGTGTTAACTCTGGCTAAAGGGAACGAAGTTGCTACAGAGTCCCTCAAAGTGGATGAGTCAAC AATAGCCATTGGATGCTGGAGGGGTAAGACGAGATTGACTGTGATGGTTACTGCCATGGATTGTCAAGAACTGCTTGAAA GGCTTTTAATACGTCTAGACACAGAAAATGGCTCCAACGGGCATGTAGACAAATCCTCTATTAATGCGAGTGAAGTACAG CCTTTACCGGAGTTGAACGGTGGAAATGAGGATGATGTAAAAGCTACTGTAAGCTAA
Protein sequence (LotjaGi4g1v0395400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGGRSRTQRKHFRQNRENEWKRSKSDPNASETQTTPWTPFATANPSFDAYYKEQAVVAPDEWDQFVAFLRTPLPASFR INSSSLFADDLRSQLENDFVHSLRAVVPEGVETEAIRPLPWYPGNFAWHSNFSRMQLRKNQTLEKFHEFLKLENEIGNIT RQEAVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHQSTKAGSLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIV TNHEAQNFPGCRLNRNHEQMELDHHINQLLFDRVLCDVPCSGDGTLRKAPDLWRKWNSGMGHGLHSLQVLIAMRGLSLLK IGGRMVYSTCSMNPIENEAVVAEVLRRCGGSVKLVDVSSELPQLIRRPGLKKWKVYDKSTWFVSYKDVPKFRGGAILPGM FPSGRLDNSNRNVDMGDIANGANGNAEDCIQAVENPVMPESVEEVSDLPLEHCMRIVPHDQNTGAFFIAVLQKVSPLPAI QEKPKIDVGGKCAEPANHSLQDAQVLQINSSECADEEILEEASEENVNDNEPDTEDLEVSPVPNEEDSKETEEPHNVQNV EKKIPGKRKLQIQGKWRGVDPVVFFKDEAIISSIRDFYGIDEKFPFSGHLVTRNDDTSHVKRIYYISKSVKDVLQLNLSV GQQLKITSVGLKMFERQTARQGSDAPCAFRISSEGLPLILPYITKQILQASPADFKRILQDKDVKFDDFADAEFGKNVAN LLPGCCVLTLAKGNEVATESLKVDESTIAIGCWRGKTRLTVMVTAMDCQELLERLLIRLDTENGSNGHVDKSSINASEVQ PLPELNGGNEDDVKATVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 41 | 41 | - | – | |
| PANTHER | 2 | 806 | 805 | 0.0 | – | |
| PANTHER | 2 | 806 | 805 | 0.0 | – | |
| MobiDBLite | 14 | 28 | 15 | - | – | |
| SUPERFAMILY | 49 | 474 | 426 | 4.07E-57 | ||
| ProSiteProfiles | 67 | 474 | 408 | 49.525 | ||
| PRINTS | 128 | 149 | 22 | 9.0E-15 | ||
| Pfam | 172 | 356 | 185 | 6.7E-33 | ||
| PRINTS | 182 | 192 | 11 | 8.3E-21 | ||
| ProSitePatterns | 271 | 282 | 12 | - | ||
| PRINTS | 272 | 284 | 13 | 8.3E-21 | ||
| PRINTS | 322 | 338 | 17 | 8.3E-21 | ||
| PRINTS | 356 | 375 | 20 | 9.0E-15 | ||
| PRINTS | 456 | 473 | 18 | 8.3E-21 | ||
| MobiDBLite | 519 | 564 | 46 | - | – | |
| MobiDBLite | 519 | 541 | 23 | - | – | |
| MobiDBLite | 542 | 564 | 23 | - | – | |
| PRINTS | 644 | 656 | 13 | 9.0E-15 | ||
| MobiDBLite | 787 | 802 | 16 | - | – | |
| MobiDBLite | 787 | 818 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Molecular function | TRNA (cytosine-5-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine. |
Expression pattern of LotjaGi4g1v0395400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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