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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0401800 |
| Transcript ID | LotjaGi4g1v0401800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aminotransferase like protein; TAIR: AT4G39660.1 alanine:glyoxylate aminotransferase 2; Swiss-Prot: sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; TrEMBL-Plants: tr|I1KT81|I1KT81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0401800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77910090..77914345) extracted from Lotus japonicus Gifu genome v1.2.
ATCTTATTAACTACTAATACCATATATAAATCATAAATGCCACATTAAAATGGCTTGATGGATAATCTCAAGTGGTCCAA AAAGTCATCATCTTCATCCTCTGATTCCGATCCTTGTCAAGAAACTCATCAACAATCCCATTTCTAATAAAGAAAAAACA AATTAATATCAGCATTTCCATTTTCATTTCAACATTAAATGGTGCCAGCAAACATGGAAAAACATCATCAAACAAATCAA ACGTTTCTTGCTTGCTTCACGTGCCACCTTCCCTATATAATAAACCCAATCTCCCTCTTCACTTCAGAAATCAGAACCCA ATCAATCACTCACTCATGGCTGCGATGATGCTCAAGAGAACCATCTCATTCGCAACCTCCAAGGTTACTCACTCCCATTT CCGTGCATGCAGCAGCTTTTCCTCCTCCGCCGCCACCGCCGGAAACCCCGCTCCGGCGCCGCCGCAGCTGCCGCCGTTTG ACTACCAACCGCGTCCGTATAATGGGCCACTCGTCGATGAAGTCCTCGCCAAGCGGCAAAAGTTTCTCGGTCCCTCCCTG TTCTACTATTATCAGAAGCCTGTGAGTGACGCTCGATTTTTTTCTTCACCCCCTTTTGTTTATTTTGATGTTTCTGATTA TTTTCATGTATTGGGTATTTGAAAAAGTGTGAAAGTTTATGTTTTTCTGATCAGGCAAAGATTTTTGCCAATGTTGTTGT TTTTGTTATTTTTTATGAATTTATGAATGTCTGATTCAGATTTTAATTACTTTTTCATGTGTAATAGCTGAATCTTGTGG AGGGGAAGATGCAATTTCTTTATGATGATACTGGGAGGCGTTACCTTGATGCTTTTGCTGGGATAGTTACTGTTTCATGT GGACATTGCCATCCTGAAGTTGTGAATGCTATCATAGAGCAGAGTAAACTTTTGCAGCATACTACAACCATTTACCTGAA CCATGCTATTGGTGATTTTGCTGAAGAATTGGCATCTAAAATGCCTGGAAACCTTAAGGTCAGTTTTCTGTTAATCCCTT GTGTCTAGATAGTGTTCCTGGAATTTGTTTTAGAAAAATAGTATGAGGATGGAGGGGTCTACATTACAATTTAATAGTAT TGCCAGGGTTTTAAATTGTGGTTGCTGTCGCCGCTGTGTTGTAGAATTGTGAACAAATGCAGGGTGATCCGGCCGCAATT GCGGTTGTGATGCTGTTGCAGACTGAATTTGAAACCCTGACGAATGCTTCTCCTTGAAATGTCTTATAGTTTAACATTAC CTTGTTTCATGCTTCATGTCATGCATTCATTGGAGACATGCAATGTCCAGTTATCTTTCAATGTAGAACATAATCGTCAA ATGCACAATTTTTAATTGCAGGTTGTTTACTTTGTAAATTCTGGTTCAGAAGCAAATGAGTTAGCAATGCTTATGGCTCG ATTATATACTGGTAATCTTGGTATGATTTCTTTAAGGAATGCATATCATGGTGGGAGTTCAGGTACCATTGGCCTGACTG CTTTGAACACATGGAAATACCCAATACCAGAGGTTTGTCTATCTATGCCTTTGATCACAATATTTCAATATGTCAGTTGG CCACTATTAAATTTCAATGAGAATTTGGAAATAGAGTATACATCTGTGGCAGAGGAACCTAAGACTCCCCTTTTTGCCTC AATAACTAGTTGGTGGTTGCAGCTTTTGTAATTATTTACTGGGTGCTTTTAAACATAAACAAAATTGATGAATTTATTTT TCTCATTTTAGCTTCTTTTTTTTGGGTTATAGGATTCAGCAAGATGATCACATGTATTAGAAACTTAAATGGGAAAACTT CAAATCTGTTTCAAAAATTCTGTCATCACTTGCTTTTCATTTTTCAGTTTATTGTTGCATAAGAAACCAACAATAAGATA TATTTGACTCCAAGCTAGTCTCGTTGTAATATTTTGTTGTTGTGAATGTGGCCATTCATTGTTCTATTAGAGATGTTGCA ATATAATTATTCTTAACAATGGTTTAAACCTTTCAGGGAGAAATTCAACATGTTATTAATCCAGATCCATACCGTGGAGT CTTTGGTGCAGATGCTAATAGTTATGCCAGAGAGGTCCAAGATCATATTGATTATGGAACTTCAGGAAAAGTTGCTGGAT TTATAGCTGAAACAATTCAGGTATGTATAACTATAATCTATCATGTTTAATATTTGAAGTGGAATTAAGATTGGCCCTTT TATTTACTCTCCTCTCATGGCTTATTAGGGAGTTGGAGGAGCAGTGGAACTGGCACCTGGGTACTTGAAACTTGTTTATG ATATTGTACACAAGGCTGGTGGTGTCACCATTGCAGATGAAGTACAAACTGCGTTTGGCCGCACAGGAAGCCATTATTGG GGATTTGAGACACAGGGTGTCATTCCTGATATAGTTACAATGGCAAAGGTTTGTGCCATATACCGAGTCCTGGACACCCT AATCATACATTAGAATATATTAACTTAAATATCTTCTGTTGTTATTACATGGTATCTCATGTTAATCTGTTTTAGGGTAT TGGCAATGGTTTGCCGATGGGAGCTGTAGTTACAACTCCAGAAATAGCAAGTGTGATGGCCCAGAAGGTTCAGTTGAACA CATTTGGTGGGAATCCTGTATGTTCTGCCGGAGGGCTCGCAGTGCTGAGGGTTCTTGATAAGGAGAAGTGCCAGGCTCAT TGCGCTGATGTTGGTTCTCACATGCTCGAGCGTTTGAGATCACTTCAGCAAAGATATGATAGTATGTCTATCTCGAATCT AACATCCTAGAAAAAGTTTGTTTTTTGCTTTTGTGACATACTTTTTGATGGCACGTTTGCACTTTATAGCTATCTACCTG CATCCCATAGTAGAGGCATAAACTTTGAATTGAGTACTGATCTTTTAGCACCAGACCTTGTTTGGAAATACATTATAGCA TAAACGCTTATGCAAGTGTTTGAATAAGCTGTTTTGAGTTAATTTTCATAAGCTGACCCTTATTGCCATAAGCACTTAAT TAAACTGTTTACCCAAACCAACCCTCAGTATGGAGCTGTGTCATATGTTTATTATACACAAGACTGTTTCTCATATTGCT GCAATTGTGTTGACTATGCTCATGGTTATTATATAATGTGGCAGTCATTGGTGATGTGAGAGGAAGAGGCTTGATGGTCG GGGTAGAGTTTGTAACTGATCAAAAGGAGAAGACTCCTGCAAAGGCTGAAACTAATGTTTTGCATGAAAAACTTAGAGGT GAGACAAGAATCATTTCAACATTCATATGAAGCCTTCTTTTTCTAAATTTTTTTCAAATTAATAGTCTAACAACCATTTA CTTGCATATGAATTGAAGAGCTCGGTGTCCTGGTTGGGAAAGGAGGAATGCATGGAAATGTTTTCAGGATTAAGCCACCA ATGTGTTTCACCAAAGATGATGCAGGTATAATTATTTCCTCACTCTCTTAGTGCATGTTTGGAAATTCTTCTATTTTTTA TTCTAAAACCAAAACAATTCTGGAGAGAAGCATCTGTAAGCCGCTTTTGAATTGATTCTAAGAAAAAATAAACTAAGACA TGGTCTTAACTGAGATTTGCGAGTTCGACATTCTTTCTTGATGCCTTCTCCTAGCAAAATACTGCTTAACTGACTGTTCC CCTTCTGTGCAGATTTTCTTGTGGATGCTTTGGACTATTCTTTATCAAAGTTGTGAGATGACTCTTCAAAATGGGGGCAA GTTGCTGCTGTAACAGCTCTTACAAGTTATATATTTCAGTTTCACATATGTTGGATAATGAAATGTTCACCCAAGGGGGT TTTCCTTTCTGATTTGGATATTTTAAGTTGACCTTGGATTCGTGTGAACAAAATTGCGTGTTTCATGGCATTAAAGAGTT TGCATTCAGTCCATTAGATTAATAGGTGATCTTGGTATAATTTAACTTGAATTCTAATTGAATAATAATTGAAAATTGAT GAGTAAGGTCATGATCACGAACATTGATGAGTTAGGTCATGATCATGAACATCATAAATCACAGGTTTGCTCGGCTACTT AGAACAAAATGTGGATCCAGGTTAGGTTAAATTCAATGTGTCAAAATCATGTTTCTCCGATCCACGTTAAATTAGACGTG ACGAATTTTATCTCTTTGTTATTGGCTTGAGATACATGAAATCACATGTGCATTGACACTTATGCCAAAATAACCAGGAA TTTAGTAGGTTCAAAG
CDS sequence (LotjaGi4g1v0401800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCGATGATGCTCAAGAGAACCATCTCATTCGCAACCTCCAAGGTTACTCACTCCCATTTCCGTGCATGCAGCAG CTTTTCCTCCTCCGCCGCCACCGCCGGAAACCCCGCTCCGGCGCCGCCGCAGCTGCCGCCGTTTGACTACCAACCGCGTC CGTATAATGGGCCACTCGTCGATGAAGTCCTCGCCAAGCGGCAAAAGTTTCTCGGTCCCTCCCTGTTCTACTATTATCAG AAGCCTCTGAATCTTGTGGAGGGGAAGATGCAATTTCTTTATGATGATACTGGGAGGCGTTACCTTGATGCTTTTGCTGG GATAGTTACTGTTTCATGTGGACATTGCCATCCTGAAGTTGTGAATGCTATCATAGAGCAGAGTAAACTTTTGCAGCATA CTACAACCATTTACCTGAACCATGCTATTGGTGATTTTGCTGAAGAATTGGCATCTAAAATGCCTGGAAACCTTAAGGTT GTTTACTTTGTAAATTCTGGTTCAGAAGCAAATGAGTTAGCAATGCTTATGGCTCGATTATATACTGGTAATCTTGGTAT GATTTCTTTAAGGAATGCATATCATGGTGGGAGTTCAGGTACCATTGGCCTGACTGCTTTGAACACATGGAAATACCCAA TACCAGAGGGAGAAATTCAACATGTTATTAATCCAGATCCATACCGTGGAGTCTTTGGTGCAGATGCTAATAGTTATGCC AGAGAGGTCCAAGATCATATTGATTATGGAACTTCAGGAAAAGTTGCTGGATTTATAGCTGAAACAATTCAGGGAGTTGG AGGAGCAGTGGAACTGGCACCTGGGTACTTGAAACTTGTTTATGATATTGTACACAAGGCTGGTGGTGTCACCATTGCAG ATGAAGTACAAACTGCGTTTGGCCGCACAGGAAGCCATTATTGGGGATTTGAGACACAGGGTGTCATTCCTGATATAGTT ACAATGGCAAAGGGTATTGGCAATGGTTTGCCGATGGGAGCTGTAGTTACAACTCCAGAAATAGCAAGTGTGATGGCCCA GAAGGTTCAGTTGAACACATTTGGTGGGAATCCTGTATGTTCTGCCGGAGGGCTCGCAGTGCTGAGGGTTCTTGATAAGG AGAAGTGCCAGGCTCATTGCGCTGATGTTGGTTCTCACATGCTCGAGCGTTTGAGATCACTTCAGCAAAGATATGATATC ATTGGTGATGTGAGAGGAAGAGGCTTGATGGTCGGGGTAGAGTTTGTAACTGATCAAAAGGAGAAGACTCCTGCAAAGGC TGAAACTAATGTTTTGCATGAAAAACTTAGAGAGCTCGGTGTCCTGGTTGGGAAAGGAGGAATGCATGGAAATGTTTTCA GGATTAAGCCACCAATGTGTTTCACCAAAGATGATGCAGATTTTCTTGTGGATGCTTTGGACTATTCTTTATCAAAGTTG TGA
Protein sequence (LotjaGi4g1v0401800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAMMLKRTISFATSKVTHSHFRACSSFSSSAATAGNPAPAPPQLPPFDYQPRPYNGPLVDEVLAKRQKFLGPSLFYYYQ KPLNLVEGKMQFLYDDTGRRYLDAFAGIVTVSCGHCHPEVVNAIIEQSKLLQHTTTIYLNHAIGDFAEELASKMPGNLKV VYFVNSGSEANELAMLMARLYTGNLGMISLRNAYHGGSSGTIGLTALNTWKYPIPEGEIQHVINPDPYRGVFGADANSYA REVQDHIDYGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVHKAGGVTIADEVQTAFGRTGSHYWGFETQGVIPDIV TMAKGIGNGLPMGAVVTTPEIASVMAQKVQLNTFGGNPVCSAGGLAVLRVLDKEKCQAHCADVGSHMLERLRSLQQRYDI IGDVRGRGLMVGVEFVTDQKEKTPAKAETNVLHEKLRELGVLVGKGGMHGNVFRIKPPMCFTKDDADFLVDALDYSLSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 41 | 41 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 9 | 17 | 9 | - | – | |
| Phobius | 18 | 35 | 18 | - | – | |
| PANTHER | 20 | 479 | 460 | 2.1E-242 | – | |
| PANTHER | 20 | 479 | 460 | 2.1E-242 | – | |
| Phobius | 36 | 480 | 445 | - | – | |
| PIRSF | 60 | 184 | 125 | 8.5E-8 | ||
| Gene3D | 60 | 473 | 414 | 2.4E-138 | ||
| CDD | 64 | 474 | 411 | 3.09845E-149 | ||
| SUPERFAMILY | 76 | 479 | 404 | 1.39E-114 | ||
| Pfam | 82 | 474 | 393 | 1.0E-86 | ||
| Gene3D | 117 | 375 | 259 | 2.4E-138 | ||
| PIRSF | 181 | 480 | 300 | 6.4E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Transaminase activity | Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi4g1v0401800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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