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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0408000 |
Transcript ID | LotjaGi4g1v0408000.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein TONSOKU; TAIR: AT3G18730.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q6Q4D0|TONS_ARATH Protein TONSOKU; TrEMBL-Plants: tr|I1KTF7|I1KTF7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0408000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78393767..78403544) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCACCTTTGCAAATTCGAACCTCACAAACGAAGCAGAGTTTCAGTCTCAGAGAACCCAAAGCGACACCGTTCACCGT CGTTTCGAGATGGACACAGATCTGAAGTCGGCGAAGTCCGCTTACCGGAACGCCAAGGCGGAGGGCAACCACCAGGAGGA GGCGCGGTGGGCCAATGTCATCGGCGACATATACAAGAACAGAGGAGAGTACACTGAAGCCCTCACCTGGCTCAAAGTCG ATTACCGCATTTCGTTGAAGCACTTGACCGAGAAGCACTTGCTCCCAACCTGTCAATCCCTCGGTGAGATCTATCTCCGC CTCGAACGCTTCTCCGATGCCCTAACTTACCAGGTCAGTGCTCCGATCAACACTTGTAAACTCGATTTTACGCGATTGAT TTTCACTTTATCAATTTGATTCTGATTATACGTGAGTTTGAAGTGGTTTAGAAATTGAAAATTTCAATCCAGATACGAGC ATTTTCTATGTGTTTATATTGCAGAAAAAGCATTTTCGATTTCAGGCGATTGATTTTCACTTTGTGAATTTGATTTTGGT TAAACGTGAGTTTGAAGGAGTTTGGATTGGTGTAGTTCATGTTTAGGAATTGAAATTTTCAATCCAGATGCGAGCATTTT CGATGAGTTTATATTGTTGAATTTCTCGATTGCAGAAAAAGCATTTAGATCTTGCGAAGGAGGCTAGTGACCTAGTTGAG CAGCAGAGAGCAAGCACGCAGCTCGGTCGAACGTATCTTGAATTGTTTACTAAATCGGAGTATGATCATCATTCGATTCG GAAAGCTAAGAAGTATTTCAAGAGTGCAATGGATTTGGCCATGACTTTGAAAGAGAATCGGCCGAATAACAAGTCATACC TCAAGGAATACATTGATGCTCACAACAACATGGGCATGCTGGAAGTAGAACTGGAAAATTGGCATGATGCAATGTCAATT TTGGTTAAAGGTTTGAAAATTTGTGATGAAGAGGAGATTAGTGATAATGATGATGGGCGCAGCAGGCTCCATCATAACCT TGGGCGCGTGTATATGGAATTGAGGGCTTGGGATAAAGCTCGGAAACACATGGAGAAAGACATTCATATTTGTAATAGAA TTGGGCATCGGCAAGGAGAAGCAAAAGGGTATATTAATCTCGGTGAAATGCATTATAGGATACAAATGTATGAGGAAGCA AATTCTTATTATGAGAAGGCGCTTACTTTGGTAAGAATATTGGAGGATGAAGAGGCTTTAATGGAGCAATGTAACGAGAA TATTAAGATAGTGAAAGAAGCTGTGAAAGTAATGAAAGCAATAACGAGAGAAGAACAAAACTTGAAAAAACTGAAAAGAG ATAAAACAAATGCAAGAGGAACACCGGATGAACAGAAATTTTTAGTGCTGCAAAATGAGACACTTGACCGACTCATTGAG AAAGCAGGGATGATATTTGCGTGGGAGAAGGTATCAATCTTCCATCTTTGTGTTTGTGACACAGAAGTCTGTAAATTAAA TGTCATGTCTTGCAATTGCTATTTACCTGACAAAATTTCAATATATAAGTTTTGATAAGGCAAGTTGTTTTTTCAACAGA TTCGTTTACTACACCAAGTAGGCTTCTTTTCAATCAGAGAGAAGTGTTTTTTGTTGTGTTAATTTGTGCCTATCATGTTT AAGAGACAAATGCTAAACTCACATGGCTCTTTTCCATTATTCATCATTTGACGTTTTAGAATCTTTCTCAACATAGATAA AAAAATGTCTTTTTGGTTTGGTCTACTATTCTTGATTTAAGGAACTAATTTGCACTTGTAGTGTCTAGTTATCAATTAAC CGCAAATTTATGAACATTGTTTTAAGTGCATTTTTTTCTTTCATCTTTGCAACTTCTTTAATCAGAAAACCTATGCAAGA ACTTACCATTAAGAAATAAGTGAAAGTTAATTCTATGATGTATTGACGCTTGCGATGTTAGCAGCACCAGAAATAGGGTA TCAGTATCAAAGTTGCTTAAAGCATGCATCATTCACATGTGTTGCTCTCAAATGTTTCCCTTCATGTTTGATAACTTCAT GACCCATTCATTAGCATTATTTGGTGATTGCAGTAAACTTTTGAAGCTATGGTATGTTTAGTAGTTTCAAATGTATGACT TTTCTTTCTAAACAATGTTTTGTTTAGCATTGTGAATTTGCAAAGGAGAAGAAGAAAATAGCAAAAGAACTTTATAATGA GGAAAGACTGGGTGATTCATATCTCAACATTGGAGAATCATACCAGAAGCTTAGAAAGTTTAACAAAGCAATCAAATGGT ACAAAAAGAGTTGGGAACAATTCATACAGCATGCTAACTTAGAGGTAAAGTTTTCATTATTCTATGATATAATATTTAAA ACTTTTTGTTTGCTTTTCTTCCTTTAATTCAATATATAACAAATCTGAATTTGGAAATAGCATATATGACTTTTTGAAAC ACTTGTTAATATGAGTGTATTGCAAGTCAGTTATTTACTATGAAGCATGGCCACTTTGAAAGAGAGGAGCTATATACATG TCAGGAAAAATGATTAAATATTCTAAGCCAAGTATAAAACATAGACACCTAAACTAAAACCTACTCATATGTACTTGATA CTTACACTCCAGATGGGACCTTCAATTTGTGTGAATGCATTTCAATGCCCTTGCTTCGTAGGTTTCATGGTATCCAAAGA TAAATGTAAACTAATACTACCTCTTTGTCTACAACTGGGATGCTCCTTGGTTGATCTTATGCTTTGTTGATAACGATTTT AGGGGCAAGCTCTTGTGAAAATTAATATTGGTAATATTTTGGATTCTACTCAAAATTGGAGAGGAGCATTGGATGCATAC CAAGACAGTTACAGGTAAATTTAATTTCTTGAAATTAGATGAATAATTTTTTTTTATCAAGAAATAAATTTGCAATTACA ATGTATTCTCCAAGTAGCTAAATTTATGTTGAACACAATAGTTTTCTGTCACTTTTCTCAGATGCTTTTGGTGCAACTAA GTTGAATAAGAGTAGGACACATGAATTATGTGGTATAAATTTGCTTTATATTGTTGGATCACCGCAGTTTTGTGAATCAT GTAAGGAAATTACAAGAAATAGACTCCATACTAGTTTCTTTTAATTTTTCTGAAGTTACTTCTTTGATAAAAATATGTTT GGCTGCTATTAAATTGTTTACTTGTGTTGAGAAGTCCCTTATAACTTGGTTTAAATGCCACAATGCGCTTCTAGAAGTTG CAGCTGCAGATGCTGCCAAAACTAGAGTGAAACTTGACTGTCAATGACATGTGTGACTCAACCTTGATTGGAGTTGCTTG CTTCAAAAGAATACATCCTTTGTGACTTTTGTTTCATGCTGAACTGCATTAATTTGTTCCCGTGATATTGCAGAATTGCT GTTGAGGCAAAGCTTCCTGATGTACAGATTAATGCCTTGGAAAATATGCATTATAGCAACATGATCAGATTTGATAATGA GGATGAGACCTGGTAACTGATTCATGGAAGTCTATCTTTATATATACATTTCATCCAATTTCATGGAGTAACTCATGGAC TCATTTAAATATTCTAACCTTTTAGAGGCCAAAATCTGGTCATCTGCTAAACTGAATCTATTTTATTGTTTCTGATATTA TGGGTCCTTTTTCTAGACTTGTACTGTTGCTTCTTATCAACTGTGATCCTTTACAGGAGGTTGAAACTTCTAATTGATAA GCTGAAGAAACCAGAAGAAGAGCCAGAAGCTAAAACTATGCCAGAGGATCGTTGCTCTGAGACTGATACTGAAGCAGATC ATCTGTCAGATGGTGGGTCTGATGATTTCTGCATTCCAAAGACAATTTCTAGGTCAAAATCTCGGACTACTGGAGAAGAG TTTACAGATGACGTGCCTCTAATGTCAATATATCAGTCCATAAAAGGCTCATCCAAAAAGAACACAGACCATATGGATAG TCTTACCAACTCTTCCAAGCAAGCTCAGCTGTCACCCAAAAGTATGACAAATCTAACCAGCAGCCATCAGACGGCAAACA ACCGTAAACGTGTTCTAGTTATTTCTGATGATGAGGAGGAGTATTTGAGCAGAAAGGATCATAAATGCCTGATAGAGGAC TTCCCCACTTCTGATGCAAGTATGTTTTCCTTGCTTTGCTCTAACCCTAAGATTCCCTTGTACCAAAGTCATGTACTGAA TGGTACTTGCCTGATTGCAGTTATTAATAAAGCCAGTCCTCGTAAAGTTCAGGTAAAGAAATCTCCACCTGTTTGCATTT TTGTGAGTTTTACTCAAGAACTATCAGCCTGCTCAGGCTTTGCCTTTTGAGATGGCAGGTTGTCTCTGAATATAGATCCA AATATCCAATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTCTAGTCCAATCACAGCCGCTAAATCTAGCAGACAT TCTGGATCTTTGAGTAATGATATAATTGCTGAAGCGGATTTTCCTAGTGGTTCTAAATGTGACATAGATTCCTCAGGCAA ATATAAGGGTGTTGCCCATCCCTTGGTGCAATATCCCCAAAATGATGTGAGTTCTATTGTCATGGATTTAACTTTAATAT AGTTGAGCTTCATGCTTTGGCCACATTGTCATGTTCATCACGATTCTTGTGAATGGATACTTTTCTAACCTATGTCCTCC TTTATATTCTCCAGTTGCAGCAACATATTACATGCCGGATTGGGAATGATCTGATTCACGTAGAAGCAGCCTTGTGTACT GCTGATGATCAGTTGAATATTGACTTGTTAAAAGCTGTAGTTCCATGTTTATACTATCTACAACTTCCAGCAGAAAAGAG ATCAGAGGGTAGGCAATTTCTGGTTTAAGTGTTTTCTACTTTTCTGTCATTGTTAATAATATTAGCATAGCAGATCACTG GCCAACTTGAATAGACATTTGGTAGAAATTTGATTAAGGGGAAAATGATAGTGGATTTTGGTATCTTGGTTGTGCACATA AAGGATGATAGATGCTCCAGCTCCTCATTATTATGAACACTTCTACCAGGATTTCGGATGAGTTAGTTTTGGTGTGGCTA TTGATTGCTCTATCTCTGATATTAAGGTAGAGTAGAAAAGTATCACCTAATGAGCAATGACACAAAAAGCAATCAAGTCT TCCTATGCATTGACTATAGTATACTTAGCTCACAAGATTTTGACCTTCCTATTTTTCACAATTTGTGCTCAATTAAGTAA GGATAGAGGCACAGCACATGAGAAATACATTGTCCCACAGCTAGGTGCAACGTATGAATGCTTTAAAATCAATGTGCATT ACTGGTTTTGGCTAAACATGTTTTGGCAAATTCTTGTACTGCATCAGTTGTATGGATCTGGATAAAACTTCTAAATCTGA CGCCTGCAGAGGGGACAGGAAGCATTCATATTGAATAGCTGTTGGTGTCTGACTAGTGAATTCATTCTTTACCAACTGCC TTACTATTTAGCACATTTACTTCATAACCTTTCTATTCATTCATTTATTTATTTACCTTCTTATTGCAGTTTCCCTTCAG TTCACCATCTTTTTATGCTGAGTTGACTTGTAATAATTTATGAGTAGGTTTGTTGCCCATAATACAGCACATAAAATGTG CTGGAAGAGATCTAGAATCCTTGGAACCTATTGAAAAGCTTAAGGAACATCTGGGAAATGACACATTTGAAGCTTCCATT GAAGGTATGCAATGCACTATTTATACTTTTTTCTTATTCAGTGATATAACCATGCTATTATCTTTATCTTTGCACAGTTC GCAAATCTAAATTCTTGAATCCCTGCCTTCTACTTGGCTCTTTATATAATCCGAACTCTTATGCCTCTACCTATTTGCTT GATAGATAGTAACTGTAACTAACTAAACAAATACTTTCTAGCTAACTCGGACCCTGTTCCCATTATTCTTCTGGGTCCTA TTTAGACACCACATTTAAGTTTTATGTTTTACAGGATGCGTCCAGAAGCGCCTAATAAAAATATACGTAGACTGCTGCAC GGAGTTGTCTAAGGTACCAAATATCAAGGTTCTGAAGAAACTTTATAATTTAGAGGTAAGAAAGAGGTTAGCGGTATTAA TTCTGTCATTGCCAGAATAAGTGACATATATTCCTTGTCATTTTTGGATGTTGGCTTGAATTTGATTTTTTTTCTTACAG CTGATTTTGGGTTTATTGTTAACAGGTTTCGGATGATGAAATCGTTGTGTCTGACTGCGACCTGCAAGATTTGTCTATAA CACCATTGATAAATGCACTGCAATCTCAAAAGGAATTTGCAATGCTTGATATCTCTCACAATCTGTTAGGTACATTTTTT TCTGATTTGCCATCTTTTTGCTTTAGATTCCGGTATATTCCTGTCTGCAAGTTGTTTAACAACCACTCTTTTCTTCTCTT ATGCTTCTTTAAGAGGAGCCTTTCTTTTGGTTCTCAAGTCTCATCTGTATTTTATCCACCAAGTAATCCTTTTATTGGCG ACTAGTTGAATATTATAAATACTTAAACCATAAAGAACGAATATAAAAAATTATAATAAGTAAAATCTACTGAATAGTTT TTGCCATGTGTTGAATGAATAATGTTTTAGGAAATGGGGTGATGGAAAAACTTAAGAAGGTGTTCAGTGCATTGAACCAA TCTTACGGTGGCTTAACTTTGGATTTGCATTGCAATCGATTTGGCCCAACAGCTCTGTTTCAGGTATGTTACCACTTGCA AACATTTTCATTTTTTCCTGTTTGCCTTCTTCCCATTGTTCCATGTTTATAATAGTCGTTCTTTTTAAATGTGAATTTAG GTCCAAGGGTTTAAAATGATGGTTACACAATATATTTTATTACAGAAAGATATTTCCTTAAATTGAACTTGTTTCATTTT AGTATAGCCATAAATTTATTTTAGCTATGATATTTTTCTGAAAATAAAAATCAATTTCCACGTTTCAGATCACTGAAATA TGAGCTAATTTCACCTACCTTGCTCCCACAAGGTCATCTCAGTTTTTTTTAGATTGCAATATATTTTACAATAGTGTTCT ATCAATTCGATTCTTGATTAATCTGTGATAAAAGAACACTAGTCTCATTTTGCGTGACTTGGATTCCATTTATACCATCC CCAATTTGCTAATAGTTTAACTTTGCTTATTCTTGTCAGATTAGCGAATGCTCAGCATTATTTACCCGACTAGGAGTCCT TAACATTTCTGGAAACCGTCTTACTGATGCATGTAGATCTTATCTTTTGACAATCTTAAAAAGTTGTACAGGTAAGCTGC ATGTCCTGATGCTGTGCCACTTTGAATATGGGTTTCTGTTATATCTTGAAGGATGCTGATTACCATGCCCTTCCTTTTTC TACTATCCTTGGTCTCATTTTAAGCTGTAAAAATATCGGTATTTTGAATTTATGCTGTGATGCACTTATGATCTCCCACA TGTGCTTGTATGTTGATTTATACTGCGGGTATCTCCATACTTCTATTAACTTGACTCTGTTGCACAGCTCTTTATAGCTT GAACGTAGAGAACTGCTGTATCACGTCAAAAACTATTCAAGAAATGGCTGATGCATTGGACCCTGAATCTGTTCTTGCGC ATCTTTGTATAGGTATATTGAATATATCATTCTTTTCAAATCCCTGATACAAGTAACCTCAGCTTAATGGGTAGTCTTCC TCTGACAGGTCACAACAGCCCTGTATCCGTAAATGTTTTAGTTAATCTTCTGTCCAAGCTTTCTACTTTGAAAAGGTAGA ATCAATCATACCAGTGTCAACTTCCATCTCTATGTGGCATCTTTACATTATTTGTAAATTTTCAGGGCATACAGAAATTT GAGATAAATTTACCCATTGTAGGTTTTCTGAGTTGAATATGAGGGGTTTAAAACTAGGAAAACCAGTTGTCCATAGCCTT TGCCAGTTAGCTGGGACCTTGACTTTATCAGGACTGGTACTTGGAGGCACGGGTATTGGAACTGTGAGTAAAACCTATCT CCTACAATCTGTTCATTTCGTTGTACCATTATTTTTTATTCCAGCATGCTTACTTCACTTGCTCTTCTGACTGTATAGAG GCGTTATTTTGCAGGAAGGGGCTATAGAATTAGCAGAATCATTGGTCAAAGGGACAGAAGAGCTTGTGAAACTTGATCAA TCATATTGTGGGCTAACATCTAAATATATTTTAAACACCAATGTTAACTTTCTTTGTTCCATTGTTGACCTGAACTTGGA AGGAAATCCTCTTATGCGCGAGGTTTGTTCACTGTATCTGAATTTCTATTGCTGATATTCTTGCAAGGCATGTTTCCTTG ATTGGTTTAACTTGGATGTTATTAAGTATTGCTGTAACACAGCCTAGAATCTGGCTTTTCAGCATTTTAGTTTTACTCTT GACTCTAGTTAGTAGATTATATAGATCTGGGTATTACTGTTCCCTTTTAGTGATGTTTTTGTGAGTTTAACCAGTTACAT TTTTGTTATCTCTGGACATCCAGTTGTACAAGTTGCATAGTATCATAAATAGCCATTATGGGGATTACACATCTTCCCAG AGAATTAATAAACAGAAACAAATCTTTGTTATCATCCTCTATACTCAGATATTCCATAAGGGCCACTAAGTTCACATTGT TTGTTTTAATTTTTTTGGTGAATACAGGGCAGCAACACTCTATTTTCTCTTCTCACAAACACACAGTGCAGTCTCAAAGT TTTGGTCCTTAGAAAGTGTAAACTTGGGTGTGATGGAGTTCTTCACATAATTGAGGCACTGGCAGGTAAAACATGAAATC ATGTTTAGTTGTTCGTTCATTGTTTAAAACTGCTACTACCACATGGTTATGTTGTTTCCTTTTATCAGATAACAGCTGCT TGGAGGAGCTTGATCTTGCTGATAATTCTGTTCCAAATGAACTTTCTGCTCTGCAAAATGATTTATCAGTTAGAAGATGC TCACAAAACCAGGACCAGAAACTTGATAATATGAAAGTGGATGATCATCAAGAGGTCATTTGCTCTCTAAACACTGTCTG CAATCAGCTGGAAGTTGCTGATAGTGAAGATGAAGAAACTCCTTTCAGAGTAGAAGGTACTGCTTCTGGAATTGATGACA GCTGTGCCAGTTCAGGTCAAAGAAATTCTTCATCTCCTGAGTGCCATTTCACTAAACAGCTTTCCATTGCTATCGGTAAG GCAAGGAGCTTAGAACTACTGGACCTTAGTAATAATGGTTTTTCTGCACAAGTGGCGGAAGCATTCTATGGTTCATGGAA AACTCTACGACCCCTTTCAAGTCAGAAGCACATCACTGGGAAAATTATCCATTTATCAACGAATGAAAGGAGGTGCTGCG GAGTAAAACCATGCTGCAAAAAGGATTGATTTGTAGCTCACATGAGTAAGAGGGAATTCTCCAGTCAATGATGTCATTTT TTGTGAATAAAAAGGGGTTGCTTAATTAATAAATTTGTTCACAATCAACAGTTGTAATTTATGCATGTCAATTGTAAGTA AGTAGTACAGGTCCTCTAGTTTCATTTATTATGTAGAACACTGTTCTAATGCATCCATCTCAATTTCATGTATATAATAC CAGTAATGTTATACTATACTACTATTTGATGATTACAGTTACAGCTTTAGATTTCATTTTAGAATATTCTGACTCAATCA TCTTAACATGGATTAAAT
CDS sequence (LotjaGi4g1v0408000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACACAGATCTGAAGTCGGCGAAGTCCGCTTACCGGAACGCCAAGGCGGAGGGCAACCACCAGGAGGAGGCGCGGTG GGCCAATGTCATCGGCGACATATACAAGAACAGAGGAGAGTACACTGAAGCCCTCACCTGGCTCAAAGTCGATTACCGCA TTTCGTTGAAGCACTTGACCGAGAAGCACTTGCTCCCAACCTGTCAATCCCTCGGTGAGATCTATCTCCGCCTCGAACGC TTCTCCGATGCCCTAACTTACCAGAAAAAGCATTTAGATCTTGCGAAGGAGGCTAGTGACCTAGTTGAGCAGCAGAGAGC AAGCACGCAGCTCGGTCGAACGTATCTTGAATTGTTTACTAAATCGGAGTATGATCATCATTCGATTCGGAAAGCTAAGA AGTATTTCAAGAGTGCAATGGATTTGGCCATGACTTTGAAAGAGAATCGGCCGAATAACAAGTCATACCTCAAGGAATAC ATTGATGCTCACAACAACATGGGCATGCTGGAAGTAGAACTGGAAAATTGGCATGATGCAATGTCAATTTTGGTTAAAGG TTTGAAAATTTGTGATGAAGAGGAGATTAGTGATAATGATGATGGGCGCAGCAGGCTCCATCATAACCTTGGGCGCGTGT ATATGGAATTGAGGGCTTGGGATAAAGCTCGGAAACACATGGAGAAAGACATTCATATTTGTAATAGAATTGGGCATCGG CAAGGAGAAGCAAAAGGGTATATTAATCTCGGTGAAATGCATTATAGGATACAAATGTATGAGGAAGCAAATTCTTATTA TGAGAAGGCGCTTACTTTGGTAAGAATATTGGAGGATGAAGAGGCTTTAATGGAGCAATGTAACGAGAATATTAAGATAG TGAAAGAAGCTGTGAAAGTAATGAAAGCAATAACGAGAGAAGAACAAAACTTGAAAAAACTGAAAAGAGATAAAACAAAT GCAAGAGGAACACCGGATGAACAGAAATTTTTAGTGCTGCAAAATGAGACACTTGACCGACTCATTGAGAAAGCAGGGAT GATATTTGCGTGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAGAAAATAGCAAAAGAACTTTATAATGAGGAAAGAC TGGGTGATTCATATCTCAACATTGGAGAATCATACCAGAAGCTTAGAAAGTTTAACAAAGCAATCAAATGGTACAAAAAG AGTTGGGAACAATTCATACAGCATGCTAACTTAGAGGGGCAAGCTCTTGTGAAAATTAATATTGGTAATATTTTGGATTC TACTCAAAATTGGAGAGGAGCATTGGATGCATACCAAGACAGTTACAGAATTGCTGTTGAGGCAAAGCTTCCTGATGTAC AGATTAATGCCTTGGAAAATATGCATTATAGCAACATGATCAGATTTGATAATGAGGATGAGACCTGGAGGTTGAAACTT CTAATTGATAAGCTGAAGAAACCAGAAGAAGAGCCAGAAGCTAAAACTATGCCAGAGGATCGTTGCTCTGAGACTGATAC TGAAGCAGATCATCTGTCAGATGGTGGGTCTGATGATTTCTGCATTCCAAAGACAATTTCTAGGTCAAAATCTCGGACTA CTGGAGAAGAGTTTACAGATGACGTGCCTCTAATGTCAATATATCAGTCCATAAAAGGCTCATCCAAAAAGAACACAGAC CATATGGATAGTCTTACCAACTCTTCCAAGCAAGCTCAGCTGTCACCCAAAAGTATGACAAATCTAACCAGCAGCCATCA GACGGCAAACAACCGTAAACGTGTTCTAGTTATTTCTGATGATGAGGAGGAGTATTTGAGCAGAAAGGATCATAAATGCC TGATAGAGGACTTCCCCACTTCTGATGCAATTATTAATAAAGCCAGTCCTCGTAAAGTTCAGGTTGTCTCTGAATATAGA TCCAAATATCCAATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTCTAGTCCAATCACAGCCGCTAAATCTAGCAG ACATTCTGGATCTTTGAGTAATGATATAATTGCTGAAGCGGATTTTCCTAGTGGTTCTAAATGTGACATAGATTCCTCAG GCAAATATAAGGGTGTTGCCCATCCCTTGGTGCAATATCCCCAAAATGATTTGCAGCAACATATTACATGCCGGATTGGG AATGATCTGATTCACGTAGAAGCAGCCTTGTGTACTGCTGATGATCAGTTGAATATTGACTTGTTAAAAGCTGTAGTTCC ATGTTTATACTATCTACAACTTCCAGCAGAAAAGAGATCAGAGGGTTTGTTGCCCATAATACAGCACATAAAATGTGCTG GAAGAGATCTAGAATCCTTGGAACCTATTGAAAAGCTTAAGGAACATCTGGGAAATGACACATTTGAAGCTTCCATTGAA GGATGCGTCCAGAAGCGCCTAATAAAAATATACGTAGACTGCTGCACGGAGTTGTCTAAGGTACCAAATATCAAGGTTCT GAAGAAACTTTATAATTTAGAGGTTTCGGATGATGAAATCGTTGTGTCTGACTGCGACCTGCAAGATTTGTCTATAACAC CATTGATAAATGCACTGCAATCTCAAAAGGAATTTGCAATGCTTGATATCTCTCACAATCTGTTAGGAAATGGGGTGATG GAAAAACTTAAGAAGGTGTTCAGTGCATTGAACCAATCTTACGGTGGCTTAACTTTGGATTTGCATTGCAATCGATTTGG CCCAACAGCTCTGTTTCAGATTAGCGAATGCTCAGCATTATTTACCCGACTAGGAGTCCTTAACATTTCTGGAAACCGTC TTACTGATGCATGTAGATCTTATCTTTTGACAATCTTAAAAAGTTGTACAGCTCTTTATAGCTTGAACGTAGAGAACTGC TGTATCACGTCAAAAACTATTCAAGAAATGGCTGATGCATTGGACCCTGAATCTGTTCTTGCGCATCTTTGTATAGGTCA CAACAGCCCTGTATCCGTAAATGTTTTAGTTAATCTTCTGTCCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGTTGAATA TGAGGGGTTTAAAACTAGGAAAACCAGTTGTCCATAGCCTTTGCCAGTTAGCTGGGACCTTGACTTTATCAGGACTGGTA CTTGGAGGCACGGGTATTGGAACTGAAGGGGCTATAGAATTAGCAGAATCATTGGTCAAAGGGACAGAAGAGCTTGTGAA ACTTGATCAATCATATTGTGGGCTAACATCTAAATATATTTTAAACACCAATGTTAACTTTCTTTGTTCCATTGTTGACC TGAACTTGGAAGGAAATCCTCTTATGCGCGAGGGCAGCAACACTCTATTTTCTCTTCTCACAAACACACAGTGCAGTCTC AAAGTTTTGGTCCTTAGAAAGTGTAAACTTGGGTGTGATGGAGTTCTTCACATAATTGAGGCACTGGCAGATAACAGCTG CTTGGAGGAGCTTGATCTTGCTGATAATTCTGTTCCAAATGAACTTTCTGCTCTGCAAAATGATTTATCAGTTAGAAGAT GCTCACAAAACCAGGACCAGAAACTTGATAATATGAAAGTGGATGATCATCAAGAGGTCATTTGCTCTCTAAACACTGTC TGCAATCAGCTGGAAGTTGCTGATAGTGAAGATGAAGAAACTCCTTTCAGAGTAGAAGGTACTGCTTCTGGAATTGATGA CAGCTGTGCCAGTTCAGGTCAAAGAAATTCTTCATCTCCTGAGTGCCATTTCACTAAACAGCTTTCCATTGCTATCGGTA AGGCAAGGAGCTTAGAACTACTGGACCTTAGTAATAATGGTTTTTCTGCACAAGTGGCGGAAGCATTCTATGGTTCATGG AAAACTCTACGACCCCTTTCAAGTCAGAAGCACATCACTGGGAAAATTATCCATTTATCAACGAATGAAAGGAGGTGCTG CGGAGTAAAACCATGCTGCAAAAAGGATTGA
Protein sequence (LotjaGi4g1v0408000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTDLKSAKSAYRNAKAEGNHQEEARWANVIGDIYKNRGEYTEALTWLKVDYRISLKHLTEKHLLPTCQSLGEIYLRLER FSDALTYQKKHLDLAKEASDLVEQQRASTQLGRTYLELFTKSEYDHHSIRKAKKYFKSAMDLAMTLKENRPNNKSYLKEY IDAHNNMGMLEVELENWHDAMSILVKGLKICDEEEISDNDDGRSRLHHNLGRVYMELRAWDKARKHMEKDIHICNRIGHR QGEAKGYINLGEMHYRIQMYEEANSYYEKALTLVRILEDEEALMEQCNENIKIVKEAVKVMKAITREEQNLKKLKRDKTN ARGTPDEQKFLVLQNETLDRLIEKAGMIFAWEKHCEFAKEKKKIAKELYNEERLGDSYLNIGESYQKLRKFNKAIKWYKK SWEQFIQHANLEGQALVKINIGNILDSTQNWRGALDAYQDSYRIAVEAKLPDVQINALENMHYSNMIRFDNEDETWRLKL LIDKLKKPEEEPEAKTMPEDRCSETDTEADHLSDGGSDDFCIPKTISRSKSRTTGEEFTDDVPLMSIYQSIKGSSKKNTD HMDSLTNSSKQAQLSPKSMTNLTSSHQTANNRKRVLVISDDEEEYLSRKDHKCLIEDFPTSDAIINKASPRKVQVVSEYR SKYPINVEESSSSFKCSSPITAAKSSRHSGSLSNDIIAEADFPSGSKCDIDSSGKYKGVAHPLVQYPQNDLQQHITCRIG NDLIHVEAALCTADDQLNIDLLKAVVPCLYYLQLPAEKRSEGLLPIIQHIKCAGRDLESLEPIEKLKEHLGNDTFEASIE GCVQKRLIKIYVDCCTELSKVPNIKVLKKLYNLEVSDDEIVVSDCDLQDLSITPLINALQSQKEFAMLDISHNLLGNGVM EKLKKVFSALNQSYGGLTLDLHCNRFGPTALFQISECSALFTRLGVLNISGNRLTDACRSYLLTILKSCTALYSLNVENC CITSKTIQEMADALDPESVLAHLCIGHNSPVSVNVLVNLLSKLSTLKRFSELNMRGLKLGKPVVHSLCQLAGTLTLSGLV LGGTGIGTEGAIELAESLVKGTEELVKLDQSYCGLTSKYILNTNVNFLCSIVDLNLEGNPLMREGSNTLFSLLTNTQCSL KVLVLRKCKLGCDGVLHIIEALADNSCLEELDLADNSVPNELSALQNDLSVRRCSQNQDQKLDNMKVDDHQEVICSLNTV CNQLEVADSEDEETPFRVEGTASGIDDSCASSGQRNSSSPECHFTKQLSIAIGKARSLELLDLSNNGFSAQVAEAFYGSW KTLRPLSSQKHITGKIIHLSTNERRCCGVKPCCKKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 2 | 158 | 157 | 2.4E-17 | ||
PANTHER | 2 | 1316 | 1315 | 0.0 | – | |
SUPERFAMILY | 9 | 193 | 185 | 4.93E-12 | ||
ProSiteProfiles | 25 | 58 | 34 | 5.074 | ||
ProSiteProfiles | 25 | 98 | 74 | 7.105 | ||
SMART | 65 | 98 | 34 | 22.0 | ||
ProSiteProfiles | 65 | 98 | 34 | 6.431 | ||
SUPERFAMILY | 132 | 281 | 150 | 4.17E-19 | ||
Gene3D | 159 | 306 | 148 | 8.2E-22 | ||
ProSiteProfiles | 161 | 194 | 34 | 6.018 | ||
ProSiteProfiles | 161 | 277 | 117 | 12.461 | ||
SMART | 161 | 194 | 34 | 18.0 | ||
Pfam | 204 | 275 | 72 | 1.3E-9 | – | |
ProSiteProfiles | 204 | 237 | 34 | 6.461 | ||
SMART | 204 | 237 | 34 | 28.0 | ||
SMART | 244 | 277 | 34 | 0.035 | ||
ProSiteProfiles | 244 | 277 | 34 | 9.145 | ||
Coils | 277 | 324 | 48 | - | – | |
Gene3D | 328 | 469 | 142 | 1.2E-15 | ||
SUPERFAMILY | 356 | 448 | 93 | 7.21E-10 | ||
SMART | 375 | 408 | 34 | 0.082 | ||
ProSiteProfiles | 375 | 448 | 74 | 9.025 | ||
ProSiteProfiles | 375 | 408 | 34 | 7.965 | ||
Pfam | 376 | 400 | 25 | 0.0083 | ||
ProSiteProfiles | 415 | 448 | 34 | 5.31 | ||
SMART | 415 | 448 | 34 | 52.0 | ||
MobiDBLite | 488 | 524 | 37 | - | – | |
MobiDBLite | 488 | 517 | 30 | - | – | |
MobiDBLite | 553 | 588 | 36 | - | – | |
Gene3D | 814 | 1213 | 400 | 5.1E-46 | ||
SUPERFAMILY | 828 | 1286 | 459 | 1.3E-40 | – | |
SMART | 921 | 948 | 28 | 61.0 | – | |
SMART | 949 | 976 | 28 | 160.0 | – | |
SMART | 1033 | 1060 | 28 | 3.6 | – | |
SMART | 1088 | 1115 | 28 | 34.0 | – | |
SMART | 1117 | 1144 | 28 | 0.011 | – | |
SMART | 1145 | 1171 | 27 | 120.0 | – | |
SMART | 1255 | 1282 | 28 | 220.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0408000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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