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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0416000 |
| Transcript ID | LotjaGi4g1v0416000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol transfer protein; TAIR: AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|Q56Z59|PATL3_ARATH Patellin-3; TrEMBL-Plants: tr|A0A1J7HZ98|A0A1J7HZ98_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0416000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79150331..79154574) extracted from Lotus japonicus Gifu genome v1.2.
GTTGCAACAACCATAAGACCCTTAACTTATAAAATAAAGAAAACTCATGATATTTTAGAAAGTTGAGTTGAGCACAACCT ATACCATCAACATCTCTAGTTGGGACTGACTGAGTATCTGTAAAGTAGGCCATTCCGTTGCATAATTGATTCCTCTGCCC TGGAAAACCGCCGCTGATTCTCCAAATTCCAGCAAACAACCGTTTCATTCCAATGAACATACACACTCATACAACTTCAT GGTTTCATATTCAACAAAACAGGCCCTACATTTCTGCATATAGGGTCCACCTTCCAAGCTGGCACAACACACTCCAGCTC ATCACAATCACAATCTTCTCTTACTCTTCTCCCTCAACCAACACTCATGACACACCACTACTCTTTATAACTCCTCTCTC CCAATATCTATCTCTCACATTCACCTCTCTTATTCAAAGTTGTCTATATCTTTTCTTAGTTTACAACCATCTTCATCATC TAACATGGCTGAAGTAGAGGAGGCTGCAAAGCAAGTGGTGGTCAGTGATGTTCCACCACAGCCTGAAAAACCTGCAGAGA AAGTTCCAAACCCTGAGCCTGAGGAGGAGGAAGAGAAGAAGGACAATGTTGAGGAAACTGTTACTCTGGGGACCCATCTC TCCAAACACACTGACAGCAGTGACAACAACAACAACAACGGTGATGACAAGAACCCTGAAACAGTGGTGTCCAAGGAAGA AAGCACCAACCTGTCTTCTGACAAAACCCTTGAGAATGAGAACAAAGCACTGCATGAGCTTAAGAATCTCATTCAGGAGG CACTCAACAAGCACGAGTTCTCTACCCCTGCTAAACCACCACCCACCGTAGCTGCAGAAGAAAAGGAAAAACCCCTTGAG AAAGAAGGTTCTGAACCTGTTGCTGAGAAAACAGAAGAGCCAGTTGCAGAGAAAACAGAGGAGCATGTTGCAGAGAAAAC AGAGGAAACAGGGGAGAAGAAGGAAGAGGAAAAAGGAGAAGGAGAAGGAGAAGTAGAGAAGAAGGAAGAGGTGGAGGAAG CTGAGGTAGCTTCTGCTGCTGCTCCATCTGTGGATGATGATGGAGCAAAAACTGTGGAGGCCATTGAAGAGACAGTTGTT GCTGTCTCTTCCTCCTCTGTTTCCTCTGTTTTGGCAGAGCAGCAGGGAGAAACAGAGAAGGTGGCAGAGGCTGAAGCCAA GGATGAAGCTTCGCTAACATTATCTCCACCGGAAGAAGTATCCATCTGGGGGATACCGCTCCTTGCTGACGAGAGGAGCG ACCTGATTCTCTTGAAATTTCTGCGCGCCAGAGATTTCAAGGTGAAGGAAGCATTCACCATGATCCAGAACACAATCCGC TGGAGAAAGGAATTTAAAATGGATGAGTTGCTGGAGGAGAAGCTTGGTGATGAGTTGGAGAAGGTGGTGTACATGCAGGG GTTCGACAAGGAAGGTCACCCTGTGTGTTACAACATATATGGAGAATTCCAGGACAAGGAGCTGTACAAGAAGGCCTTTT CTGATGAGGAGAAGAGGCAGAATTTCCTCAGATGGAGAATTCAGTTTCTTGAGAAGAGTATTAGGAAACTGGATTTCAAC CCTGGTGGCATATGCACCATTGTTCAGGTCAATGATCTCAAGAATTCACCTGGACCTGGAAAATGGGAACTAAGACAAGC TACCAATCAAGCCCTGCAGTTGTTTCAGGACAATTACCCTGAATTTGTATTCAAACAGGTACTATACAATTTTCATCATT CAATTCATTGACTGTGCTGGTAAAATTTAAATGTGTAATGCAGTTGTTATTCAAATAGTATCTTATTCTAATTTTAATTC TAATTTGTTAGGTGTTCATCAATGTGCCATGGTGGTACCTTGCAGTGAATAGGATGATAAGCCCTTTTCTTACCCAGAGA ACCAAAAGCAAGTTTGTCTTTGCAGGTCCTTCCAAATCAGTGGAGACCCTTTTGAGGTGAAGACATAAAGATTCAAATTC AAAATTTGCTTTCTCCTTTAACTTTCAGTTTGATTTGCCTTTGGATTTTAGGATAATTTTAGATTTTACCCTTTTTTGTT TTCTTTCAGATACATAGCTCCAGAGCAACTCCCTGTCAAGTATGGTGGACTAAGCAAAGATGGGGAATTTGAAAATTCTG AAGCTGTTACTGAGATTACAATAAGGCCAGCTGCAAAACATACTGTGGAATTTCCTGTAACTGAGGTTGGTTTTCCACTT TTCTTCTGTTTTTGTCTGAATTAATTGGAAAATGCAGCATTGAAATGGGGAATCTTTCATAGGATTCCAGTACTGTTGTC AACATTGTATAATTCATTGTTTTCTTAGTTAATTAGGAATAAACAATAAACAATATAAACACAAAGAACATGCTATAGTT GGGTAAAAGCAAAGTAAACATAGAAAGTAGCTTATTTTGTAGCTGTTTGTTACCGTTGCTTGGACGAGGGCATGGAATCT TACTTAATTTGATTCTTGATATTGCTAAGAGCCAAAAATTTCTATTGCTTTTATCAAACCAATAAACCATGTGTGGACCA CTTTGGTGCTTTATTTGCTAGGTTGTTCAACCTATAAAGTAACCTTGAATATAAAATTTGTCAGCTATTTCCATAGCTAT TTCCATTTTGCCTTGTAATGATTGATGAAAATTACCTTCATCTCAAAAGCATAAACATTTAACAGGGATTTATATGAAAC ATGAAAAAGACTAGGCAGCATATAAAAGATAGAAGTCAACAGCCTATAATCCTTTCACAGTCTGTATAGCTACACCTAAT GATGTTGATGTTTTGATTCATTTATATGATTACATGCATATGCACATGCCATGTTTAGAGCAGCTTCTCTTTGTTCAAAA TCGGAAGGACAAGGCAAGACAGAAGAGCAGCTAAAGGCATCGGGCTCAGAGCCGAGTTGCAAGGCGAAAGTCAGTAGCTT TGGCCTTCCCCATAGTCTAGGAGCTTCCCAGCTCTTTCCAACAATTCTGGGTATTCAAATAGAATAAATTTGAATCAACT GCTTTTAACTCATAATCAATTCTTAATTTCTTATATGTAAAAGTTACTGATATAAGTTTCACTCCTGAATTTTAATCTTA GAATTAATTATAGAAGAATTTCAAAAAATGAGCTATGCATCTTTTCATTATTTTCAGAAGCCACGTATAATGAGTTGATA GAGTATCAAAGTTCTTAAGTTTGTTTTTATTGGAACCTACAGAAATGCTTACTCTCTTGGGAGCTGAGAGTAATAGGATG GGATATAAGCTATGGTGCTGAATTTGTGCCAAGCTCAGAAGGAAGCTACACTGTAATTGTCCAGAAAGATAGAAAGGTTG CATCCTCGGAGGAACCAGTGCTTTTCAACAGTTTCAAAATTGAGGAACCTGGGAAAGTTGTTCTCACCATTAACAACACT AGCTCTAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACTAAGCTTACCCCCTCTGACTGAGAATATCATCATGTATATGT GCGAGTGGGAAGAAGAAGAAGAAGACCAGTACCTGCATTGTTTGCTTAAGTTCTTGCATCCATTTTCACCACCAAGATAC CAGACTTAAGTTCCCCTGCTGTTCATATATGAATATAAAGTTTTTCTCTTTTTCTCTTTTGACCTTTTAATTTTGATGAC TATTTTGTTTTCAATCATTTAGTATGTATACTCTTTCTGTGTTCTTCATGCTATTATTTATTGTGGTTTGTTATTATTGA GGATAAATATCAAGGCTTCCTTTTCCGTATAGGATGGTATATATGTTGATCTTGAATATGAATCTTCTTCCTCCAGCTGC ATATGCAGTGCAGCAGCAAAATGACTAATAATTTTTTTGACCAATTTAGTTTTTTATGAATCGATTTAAACCATTTAATA TAAGAATTAAAAGCCAAGAATTCGCAAAGAACTAGAGACAATATTAGTGAGTGTAAATTTTGGGGGCTAACTCTGTTCCT GTTACTCTGTCTGCATTTAAGTTTGAATGTTTTTAAAAGAAAGATGTCATGTTGCATGTTCCCACCAGGGGGAAAGGTGA TGTGAATTATCTAACACATTGTAGTTAGATCATATTTGTCATTTTATCTATCTCAATTAAGAACAAAAATAAGTTTGGCA CATTGGAAGCGTTGGATGTCTTTACTAAAAATACTTTTCAATTTTGGGAGATGACCAAAATTGCCTTCCATTTTATCATA GAAA
CDS sequence (LotjaGi4g1v0416000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAGTAGAGGAGGCTGCAAAGCAAGTGGTGGTCAGTGATGTTCCACCACAGCCTGAAAAACCTGCAGAGAAAGT TCCAAACCCTGAGCCTGAGGAGGAGGAAGAGAAGAAGGACAATGTTGAGGAAACTGTTACTCTGGGGACCCATCTCTCCA AACACACTGACAGCAGTGACAACAACAACAACAACGGTGATGACAAGAACCCTGAAACAGTGGTGTCCAAGGAAGAAAGC ACCAACCTGTCTTCTGACAAAACCCTTGAGAATGAGAACAAAGCACTGCATGAGCTTAAGAATCTCATTCAGGAGGCACT CAACAAGCACGAGTTCTCTACCCCTGCTAAACCACCACCCACCGTAGCTGCAGAAGAAAAGGAAAAACCCCTTGAGAAAG AAGGTTCTGAACCTGTTGCTGAGAAAACAGAAGAGCCAGTTGCAGAGAAAACAGAGGAGCATGTTGCAGAGAAAACAGAG GAAACAGGGGAGAAGAAGGAAGAGGAAAAAGGAGAAGGAGAAGGAGAAGTAGAGAAGAAGGAAGAGGTGGAGGAAGCTGA GGTAGCTTCTGCTGCTGCTCCATCTGTGGATGATGATGGAGCAAAAACTGTGGAGGCCATTGAAGAGACAGTTGTTGCTG TCTCTTCCTCCTCTGTTTCCTCTGTTTTGGCAGAGCAGCAGGGAGAAACAGAGAAGGTGGCAGAGGCTGAAGCCAAGGAT GAAGCTTCGCTAACATTATCTCCACCGGAAGAAGTATCCATCTGGGGGATACCGCTCCTTGCTGACGAGAGGAGCGACCT GATTCTCTTGAAATTTCTGCGCGCCAGAGATTTCAAGGTGAAGGAAGCATTCACCATGATCCAGAACACAATCCGCTGGA GAAAGGAATTTAAAATGGATGAGTTGCTGGAGGAGAAGCTTGGTGATGAGTTGGAGAAGGTGGTGTACATGCAGGGGTTC GACAAGGAAGGTCACCCTGTGTGTTACAACATATATGGAGAATTCCAGGACAAGGAGCTGTACAAGAAGGCCTTTTCTGA TGAGGAGAAGAGGCAGAATTTCCTCAGATGGAGAATTCAGTTTCTTGAGAAGAGTATTAGGAAACTGGATTTCAACCCTG GTGGCATATGCACCATTGTTCAGGTCAATGATCTCAAGAATTCACCTGGACCTGGAAAATGGGAACTAAGACAAGCTACC AATCAAGCCCTGCAGTTGTTTCAGGACAATTACCCTGAATTTGTATTCAAACAGGTGTTCATCAATGTGCCATGGTGGTA CCTTGCAGTGAATAGGATGATAAGCCCTTTTCTTACCCAGAGAACCAAAAGCAAGTTTGTCTTTGCAGGTCCTTCCAAAT CAGTGGAGACCCTTTTGAGATACATAGCTCCAGAGCAACTCCCTGTCAAGTATGGTGGACTAAGCAAAGATGGGGAATTT GAAAATTCTGAAGCTGTTACTGAGATTACAATAAGGCCAGCTGCAAAACATACTGTGGAATTTCCTGTAACTGAGAAATG CTTACTCTCTTGGGAGCTGAGAGTAATAGGATGGGATATAAGCTATGGTGCTGAATTTGTGCCAAGCTCAGAAGGAAGCT ACACTGTAATTGTCCAGAAAGATAGAAAGGTTGCATCCTCGGAGGAACCAGTGCTTTTCAACAGTTTCAAAATTGAGGAA CCTGGGAAAGTTGTTCTCACCATTAACAACACTAGCTCTAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACTAAGCTTAC CCCCTCTGACTGA
Protein sequence (LotjaGi4g1v0416000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEVEEAAKQVVVSDVPPQPEKPAEKVPNPEPEEEEEKKDNVEETVTLGTHLSKHTDSSDNNNNNGDDKNPETVVSKEES TNLSSDKTLENENKALHELKNLIQEALNKHEFSTPAKPPPTVAAEEKEKPLEKEGSEPVAEKTEEPVAEKTEEHVAEKTE ETGEKKEEEKGEGEGEVEKKEEVEEAEVASAAAPSVDDDGAKTVEAIEETVVAVSSSSVSSVLAEQQGETEKVAEAEAKD EASLTLSPPEEVSIWGIPLLADERSDLILLKFLRARDFKVKEAFTMIQNTIRWRKEFKMDELLEEKLGDELEKVVYMQGF DKEGHPVCYNIYGEFQDKELYKKAFSDEEKRQNFLRWRIQFLEKSIRKLDFNPGGICTIVQVNDLKNSPGPGKWELRQAT NQALQLFQDNYPEFVFKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSVETLLRYIAPEQLPVKYGGLSKDGEF ENSEAVTEITIRPAAKHTVEFPVTEKCLLSWELRVIGWDISYGAEFVPSSEGSYTVIVQKDRKVASSEEPVLFNSFKIEE PGKVVLTINNTSSKKKKLLYRLKTKLTPSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 200 | 200 | - | – | |
| PANTHER | 1 | 589 | 589 | 3.8E-266 | – | |
| PANTHER | 1 | 589 | 589 | 3.8E-266 | – | |
| MobiDBLite | 26 | 45 | 20 | - | – | |
| MobiDBLite | 46 | 89 | 44 | - | – | |
| Coils | 89 | 109 | 21 | - | – | |
| MobiDBLite | 90 | 105 | 16 | - | – | |
| MobiDBLite | 122 | 187 | 66 | - | – | |
| Gene3D | 236 | 501 | 266 | 3.5E-63 | ||
| Pfam | 250 | 289 | 40 | 2.2E-8 | ||
| SUPERFAMILY | 264 | 305 | 42 | 1.96E-14 | ||
| SMART | 265 | 290 | 26 | 7.6E-8 | ||
| PRINTS | 268 | 290 | 23 | 9.2E-5 | – | |
| ProSiteProfiles | 304 | 479 | 176 | 18.713 | ||
| SMART | 309 | 476 | 168 | 1.7E-37 | ||
| CDD | 310 | 474 | 165 | 1.52724E-40 | ||
| Pfam | 313 | 473 | 161 | 8.2E-30 | ||
| SUPERFAMILY | 314 | 476 | 163 | 3.27E-40 | ||
| PRINTS | 431 | 450 | 20 | 9.2E-5 | – | |
| ProSiteProfiles | 483 | 584 | 102 | 11.606 | ||
| SUPERFAMILY | 484 | 582 | 99 | 2.22E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0416000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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