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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0416200 |
| Transcript ID | LotjaGi4g1v0416200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING-finger E3 ubiquitin ligase, putative; TAIR: AT1G47570.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q96EP1|CHFR_HUMAN E3 ubiquitin-protein ligase CHFR; TrEMBL-Plants: tr|A0A151S2D8|A0A151S2D8_CAJCA E3 ubiquitin-protein ligase CHFR; Found in the gene: LotjaGi4g1v0416200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79178729..79188086) extracted from Lotus japonicus Gifu genome v1.2.
GTCACTTATACTTATACACAATTTCATATCATGTCTCACGGGACACGCAAGCAACTCATTTTGACGTGAATAATAAACTC AAATAATTATGTAACTGGACTAAATTGCAAGTTTGCTCATCAGCGAAACCAAAATTGAAACTCACTACCATTTCATAGAC CAAAATAATATTTCAGCCTTCTTAAAATGTTGGAACTTATTAATTAGCACAAGAAAAACATGGAGGACCAAAATCATACA AATTCCAATTACAAATCTACCAAAAGTGCAATGAAAGCTATTAGGTTTAGAACAGAGGAAGAAACAAAAAAAACTTGTGG GGCGTTACACAGACGGTGAAACTGACAGTGACACGCTGAATTTGCTTCCCTTCCCATGCACGCTTTGCGAAAGTTTCAAT CTTTTTCAGTGATAAAACCCTTTGACCACTCTCACTCTCTCAGGCACAGAAAAAGGAGTGACCTTTGTGATCAATGGAGG ACAAGGGAGAATGCTCTGCTTCTGCTTCTGCTACACCCTCTGATGAAATCTGGGCCAAGCTTGGTAATCTTTCATTATTC AAGTTTCCAACTTGGGTCATTTCTTGTTTTCCAATTTCCCCCTTCCCATTATCGAATTTCGTTTCAATTCTTCAAATTCT GAAATGGAATCAGGAGATAGTGTATGAAATGTTTAATCTTTATTCGTTTAATGGCAAGCCAGCATTGTTTGGAATAATAA AGCCTCCATCTTTGACTTTTTTTTATGTCATTGCAAGTTGCTCAGAATTTCATTTCATGAACTGCACTATTGGGTCGTTT TGTATGTCAATTTTGGGCTTAATTTTTTATTTTTATTTTGGCTTCTATAAAGCCAGGAATTCACTTTAGAGGGTGAAATG CAAAGTTAAAACCTTGAAAATCATGAATGTTGAAGTTTTTAGAATATTGATAGTTAATTTTCCAATCAATAGTAAAGTAC ACTCCTCACTTTAGAAGAGAGAAATCCTATTTTTGTTGGTGCTGCTGCCATAAAAGTGACAAGGTAATAGGGTTGGTTGC CATAGATTTCTGCAAATGGCACACTGCTTCAAGTAAAGTGCTGTGGATAAGGGACCTTATAGGTTTGAAGTGTATTTTGC AGAAGGGCGGGGCTAGAGAAGGAGCTGGAAGAGTTTCTTCTTATGTTTCTATGGGGTTGAAATAGGTGGGAAGGAATGGA GTGGCTAGTGATACTGCTCACTGTTTTATTTGGTGTATGCATTTGATGTTGATTCATGTGGAGTCATTTGAATTCTGTTT GTAAGCATAGTTGCTTTAACTTTAAGCCTGTAGGGGTCATTTTGGTGTTTCCTTTAAAACAAGAATGGGAAATACAGATA TACAATGAACTTTCTGTGAAAAAATGTATGGAGTTTTTAATTCCAATTCCGAGGGGATGCCACTCTTATATATACACAAG CAAAGGGATGGGTTTAGTGTAGAGCTTGAGGCTTCCTTAAGGTTCTTATTTTGATCAAACTCTTTTCTTGTTGCAGTTCC GTCAGACTCGAGATATTCAGATGTTGAGATAAGGTCAGATGAGAAAGTAATATGTTCTGAGATATCAGCTACTTTAAGTG ACAAACACAGCTGGTGCAAAATAGTAAGGAATTCTGATCTGTGTTCTGCCACGATGGAAAACAACAGGTAAATCCATGGC TAACTAATTATTGTTAAGTAATTGAGTAAAACATGCTCTCTACTTACGAAGATAAATATTTGTGATTGACTGGAAATTAT CATTTTGAGTAGAGCAGGGAACCACTACTTTTGAAACTAAAAAATGCAATGTACGTGCCCTTCTCACCCCAAACTTTTTA TCTATTATGGGAAAATATATTTAAAACTGCAATTGGAGCTTGAGAAGTCCCACATTAACTAGAGATATGACCACGATAGC CCTTATATATGGGAAGACAATCCTCACCTCTTGAGCTAGCATTTGTGGTAGTGTTAGGCCTCCCAAATTCTAAAATGGTA TCAGAGTCTATCCTAGATCCGTTTGTTGGAGACCTCCCATATTTGGGCCACCCGGTGATGTACAGTTATGCAAATTCCAT GCTCCAGATGTCTAGCCCTAGGTGTGAGTGAGTGTGTTAGAAGTCCCACATTGACTAAAGATATGACAAAGATAGTCCTT ATAAATGGTAGAGTAACCCTTACCTCTAAGCTAGCTTTTGGGATAGAGTTAGACCTCCCAAATTCTAATAGAGCTGATAT ATCTCGCGATGATTTGTAGTGGGAACAGTCATATTAATCAAATCAGTCCCTGCCTCGCTAGGGTTGAAATCACCAGCTTC ATGGTCAAGGAATATTGATTACTGAAAGTACTTTACAGTTATAATTTACATGCTCTAAAGCTATTCCTCTGCTATATGGT TTTTATCTCCTTTCCTCTGCATTTTCACTGTCATTTTTTAAATTTCTTTTTGGGTGTATTGTGCATTCATGCTGTAGTCC AAATACAATACTTGTTGATGGGGCTGAAGTATGCAATGATAACACCATCATTATCAAGGATGGAAGTGAAATCATAGCAG GCCCTGATAAAGAAGGTCAGAGTTTTTTCTAAAAAATATTTATGTTAGTGTATCAATTGCTAATTGCTATTTCCTGAGGA GGGACTAATTTACTAACATTTGCCTATAAAAAAAAAGTAGAAAAATTTAAAATTGTGCGGACGATCAGTTGTTATGCTTC CATAAAATAGTCTTACTGTTGGGATACTGTCAATCCATTGATTCATCTCAAGCAAAATGTATTCCAACTTTTCCTTTTTT ATAATGAGATTCAGACTTTTTTTACAAAAGTTATTACATTATTTGATAAAGTGTGTTAGATAGCTAAGTTAATATAGGGC TTCAGGAGTCGAAAATAGTGTGATTGATGGTTGGGCAGCATATTGCCTTGTGGAATAACTCTGACATAAATGTAGCATGT AGTCATCTACTTTGTGCTATTTTTAAGGTTAACCTAAATCATGTTCAAAACAAGTAGAACTACTCATATGAATATTATTT CTGCTTTCCGATAGTAAAAATATAATTGGCAATATCAAAATTTCAACCTCTGGTTGATTAGCATGACTTTTGGGTCTACT TAATAATGAAATTAATAAATGTGTTTGGTGTAGAGTTGAACAATATCTTTTCATTTTTTTTGGTTTTTATGTCATCATTT GATGTTTATACGCCGGTCATTTTCCTCTCTCTTCATGGCACTAGGATTTGTCAGCTATAGATTTCATCTCGTATCTAGCC CAGAAACTTGCCAGAGGCAGCTAAAGGTTACAGTTTCTTATTTGTTCTGCATCCTTAATGTCTTCTTTAGTACCGTTTTT GTGTGTAGTAATGCTGAATGCTGATGTCTTAACTGTGTTTCTTTTGCAGATATGTGTAGATGTTGAGCATGCAAAGTGTA GCATTTGCTTAAACATCTGGCACGATGTTGTTACTATTGCTCCTTGCCTTCATAATTTTTGGTTTGGATGATAGTCTCTT CTTTCTCTTTTTGTAGTATTCTAGCTCTGTTTCAGCTCATTCACTTTTGCTTAAATTTCTATATGAGGTTACAGCAATGG TTGCTTCTCAGAGTGGTTAAGGAGATCACAGGAAAAACGCTCAACCGTACTTTGTCCTCAATGCAGAGCTGTTGTTCAAT TTGTTGGAAGAAATCATTTTCTGCGTACCATTGCTGAGGTAAACTTCACGCGGAAGCATTTCCTTCTCTCTTTTTGCTCA GTAGTTTCTCTAATCTGCTTCATTGAAAATAAGAATGGGTTGGATTGATCCACGTAGTTAATCCACCAAGAGCAACAATG CTTTGCTATTGTTTTCATTCAGTAGTTTTTCTTACGTTTTTTCAGGATATGGTAAGAGCTGATTCTACGTTAAGTCACGC AGATGAAGAAATTGCACTTTTAGATACTTATGCTTCAGTACGATCAAACCTTGTAAGATTATTCTTTTAATGGTCAAAAT TTATTTCCTGCTGCAATCTTATGCAATTCTTATATTACCGGAATTTTAGACAAAATAAAGTACATATGTGTGTGTATATT CAAATATCTGTGTATAACTGTTGTAATAAAATATACCATCCTTTGTGATTAAGGTTTGTTTGCTAGATTCTTTTATTCAA CCTGATAACCGTGGTTGATACTCTTTTTTTCTTAGAGTTTGTGATTTTACATCATAGTCATGGTTTTATTGTTTAATATT TGTTGCAATGATGTTTTTTACTATTTCTTTTTTTGTACTCTTATTATTAGGTTATCGGGCCTGGAAAGAGAAGTCGAAAG AGGGCTCAGACACCCCTGGATGATCAAACAGATGTCACAGGCCATCAGTGCCCCCAGTGTGGTAATATTACTGTTACACA ATGTCAGATGTGGAATAATGTCCGCACGACAATGCAGTCCCCCTCCCCAAATCAACCTCCTCAGTTTCCATTGCTAATAA TTCATGGCCTTAGTGTCAGTTGTTTTATCCATAAGAATATCATGTTAAGTTTGTGCCATAAAAGATATATTTTTGGTTTT TGTGCTGTACTGGCCTGCATAAAAGATATATTTTGTGTTTTTGTGCTATACATGGGCCTAATATCCTTCCTTTTAAGTTT TTTAGTGCATTGCTGACTACACTATTTTCACACTGGTATTTGGAATTTTGTTTGATAAAATTCCCTAGGATGGTCTACAT AAAATTGATAAATCTTTAGTGATGTTCTACATAGAATGGTGCATAAGATCTTCAAGAATATGGACATCATTTTTTTTGTT TTTGAATAGAATGGTGCTTGGGCTGATCATATTGAAGCTTCTTTTAGTGAAATGGCTTATGGAGCCAGCCAGATATGTCT TAGGCTCGGTCGCTTTTTCTATTTTCTTTTTGTGCCTTGTCCCTAGACCTGAAAAAGGATTCGTGTTTCATTTGTTTCGG TGCTACCTATTAGTTATCGTGGACTATGCTCTTCGAATTTCTTGACAATTTGCATCACATGTCATATAAAAAAATTTAGT CTTTTCTTTATTTCTTTGTCTCATCATACTCATTTTCTCTAATTTTTAGTAACTGAAGTTGGCGGGTTTCGTTGCAATCA TAGCATTGCTCATCTTCAATGTCAAGCATGTGGAGGAATGATGCCTTCTCGTACTGGTTTTGATGTTCCTCAATATTGTA AGTTATCATCTGTGATTTAGCCAATGGCACAAGAAAATTTATGTTACTGTTATTTGATAAATGGATTTTGAGTGGGGTCA ATATATATCATGCTAGCTTCCTGTTATTGTAGCCTTATAGGTCAAAATTTTCAATGTTTTTTAGTTTTAATATTCACATC ATACAATATGTCAGATTATTCATGTTGTTATTTTGTTGTAGGTTCGGGATGTGATAGACCTTTTTGTGGAGCTTATTGGA ATGCTCTAGGGGTAACTAGGAGTAGCTCTTACCCTGTTTGCTCCCCAGAGACTTTAAGACCTGTATGGACTACTTTGTTC ATCTCAATTGTTAATCATTATGAAAGTTGTTTCTAGAAAGCTCTTGTATTTTTGTGTAATTTTATGCCCTTACAGGGCAT ATGTTTTTGTTAATTTACACCATCTCAACAGTGTTTCCTCGATTGATATGATATAATGGTCACTTATTCATTACCTTTGC TTGTTTTTTTTTGCAGATCTCAGAACACTCTGTCTCAAGAATTCCTTTGTTAGCACACGAAAAGAATCTGCATGAACAGA ATGTACGGGCTTTCATATCCCATATTATCATTTTTGGTTCTGTTTTAGCTAATCATTTTATAATGTTGTAACCATTTGTG GTTTTGTAGATCACTGAAAGTTGTATTAGACAAATGGGGAGGACATTGCAGAATGTTATAGCTGAGATGATAACAAAACT GTATAACGGAGAAATTGGTATAGTACTTGGTTGTTTGACATTACTAAATTTTCCTTCCCTGGAATGGTTTATGAGAAGTA TAATGGTGTGTGTGTTTTTTTTTTCCCATTTTCAGTTGAGATGTTTTTACTAATATTACAAAAGGACACATTGCTTTCAC TTCATTTCTTATGATTTGATGAAGGGAAGCAAAGTGAAAACAAAAATAGCAATTTCATAATTATTATTGAAATCATATCA ACCTAAAATGAAAACAAAAAACTAACCTAATTCACCTTTAGATTCCTGTTTTGCATTAGCTTGCTACAATGCACTATGCT AATTTTCAATCTAGGGGTACATTTTCCTAAATCTTACAGAAAGTTATTCATTAGTGTAAATTATTTGATCTGATGTATGC TGCAAGTGTCAACAGATCTAGACTTATACACATGTATCCTTCTTTTCTTGGCAGATAGAACACGACTGATGCTGAATCAT GTGGATACTATTACTTCAAGGACTTTTGTATGTGGGTAAGCTTTATCCTGAATCACTGAGAGCTAAAGGGTGCTTATCTA AATGGCGTAACAGTTCAAATCCCACTTTTGAATTATCTAAGAGTAGGTTTTGAAGGCATTTTGTAACATGAGATACATAT TATGAAAATTGTTTTAAGTGGAATTTTTATGTCTTACCATTGTGGGGATACCTATACTCCAACACTGTAAAAAAGTTTCA TACCGCGCATGTTTTGTAATTCTATCTGAAGATATTAATAGTATTTCATGGAATTAATTGTCTGAGTGCCATTCCAACCT ATGCATTCATAATGCATTCTTTTAATCTTGCAGTGATTGTTATCAGAAGTTGGTGTCATTTCTCTTGTACTGGTTTCGCA TTTCTATACCCAAACGTGTAAGTACCTTCATCTCAAAGCATTGTGAACTTCAACAGATTCTGACTCTAGTAAAATTGTTT GTTGGTCTGTCTTTCTGTAGCTCACTGGTCCTCTTTGGCAATGAGATGATAATTAGTGATGTTTTTATTTGGTGATATTT TTTACACTTCATTTGTTAAACTTAAAGTCAGCAAAGTTGACCTTTTTATTGTTTGTGTATTTGTTACATGAAGCTTCTTC CGCCGGATGCATCAGCAAGAGAAGATTGCTGGTATGGATACGCATGTCGGACACAGCATCGCAGCGAAGAGCATGCTCGT AAAAGGAATCATGTCTGCCGTCCAACCAGAGGCTCTCATATGTGATGTAAAAACTGTCTCCTTTTTTAGATCTGTGTCCA GTCTTCTAATTTTGACAGAAACTAAACGTTGTGTAGATTAATCTTTCCTTTGGAGAAACAGCTGTTGGCATCATTGCCTG GTTCTAACAGGATCCTAACAGGATGTTTGGTTAGCTTCTTCAATCCAAATTTGCATCCAAAATCAATTCTAGTAAAAAAC GCATCGGCTTTTGAGTTTTGTCTAACAAAATGAATTCTAACATAATGTAGCACTTGAATAGAAATGCATTGGATTTTGTG GTTATCACTTGTAAGCATATTTGTATCAACTTTTTTTATCAGAATCAATTCTAAAACTCGGAAGTTAGTCTAATCAAAAT TGAGTTGGGCTTTAGACTCAATTATCGAATGATTTTCAAGCACTCAAAATATGTTTGTATTGTACTGAAGATGACAAAGT CATGAACATAATGGAGATGACATATTGACATAGACCAAACTACAATAATAGTAGAGAGACAGAGAGTGAGAGACTCAAGT ACGTGGAGATGAAAACGAGAGAATTAGGTGCGATGCGAGGAACGTGCCACTTTTCTTAATTTCTAAACCTTCTGCAACAC TTGGCCTAATTTGCCTTCTTAATTAGTCCTTGTGGTACAATGTCATTTGTGACAGGCGCCACATATAATCATCCATAGTT TACTAATTCAACAAATATCCATATAAAATAGGCTTAAATAAGTTTTTGGTCCCTAACCTTTACCAAATGCTTGGTTTTCG TCCCTCGCCGGAGTAAAGGTGGGTTTTAGTCCCTAACCTTTGTCAAAAAATTTGGTTTTGGTCCCTCCGGAGCTTTGGGT CAACACCGGAGCTCCGGTAGCCCATGTGGCATTGACACGTCAGACTAATGACGCCAGGTGGAATAAATTTTTTTTTTTAA ATTAAAAAAAATCTCTCCTTCATCTAATTAATCTATCTTCACTAATCTGGTACATCATCACTTTCAACAACAACAAAAAA ACTGGTTCATCATCATCTTCATCCAGAAGCTATCACCTTCATCCTCAATTATTGATTTTCACCAACTTTCTAACCAAACA ATACCAGATCCAAACATTTCAAACAGATACACTAATTAAAGGACGAAGACAGATGAGATGGGGGCACCTATATGAACCTG CTACAGTCTTGCATCCCGGTCTCCAAATCCCCGCACTTCCCTCACGCTTGCAAGATCTTCGAAAGCAAAAGCTCATCAGG CAAGAAACCATGTCGCACCATGTCATAAAAGAGATGAAGGAGGAATAATAACTCCAAACTCCAATACCAGACTGAATCGG GATTCTTCCTTACCGCTGCTTGTTCCACCGCCATCACCACCGAGCTTCGACCGCGCCGCCACGGCAGGGGTGTCGCGCGC CATCACTGTGGTCGTGGGTCTTCTCACCCTCGATCTCCCTTCCTCCATCATAGTCTTCTTCCTTCACGATCTGCTTTGCC TCTGAGACGAGTTCTAGATCCATCCCTCCGTCACCTCTGCTTCATCTCATTTTTCTGATTTGGGTATGGATTTGTTTGGA TTGGCTTCATCTTCTGTTTGGTTTGGCTTCATGGTTTGGGGCTTGGATTTGTGGAGGAAAAAAGAGGGCAAGATACCTTA TGTGTGTGAAAGATGGGCTTTGCTAAAAACATTGGGGTGGGCAGCAGATTGGGTTTCGGGGAGTTTTAGAGGAACTGCTG GTGGTGTTGGGTGAGAGGGGTTGGCGGTGGTGGTGCTGTGGGGGGGGGGGGGGCGGTGGGGGTTCGCTGGTGATGGTGGT GTTGGGTGGGAGTGGGATGAGAAGAAGGAAGAAGAAGATGAAGGGAATTATGGGTGCCTGGGTTTTGAAGATGAAGAAAA TGGTTAAATTTCTAGGTTAGAAGGTGAACTTCTAGTGTTTCCATTTTAATGAATTAATGAAATTAATTAGGAGGTAATTA GGTTTTTATAACTGAGGTTAATTCACATCTGTTTTTAATTTAATTTTTTTTATTTCCACCTCACCTCATTAATCTGACGT GTCAATGCCACATGGGCTACCGGAGCTCCGGCGTTGACCCAGAGCTTCGGAGGGACCAAAACCAAATCTTTTGACAAAGG TTAGGGACTAAAACCCACCTTTACTCCGGTGAGGGACGAAAACCAAACATTTAGTAAAGGTTAGGGACAAAAACTTAT
CDS sequence (LotjaGi4g1v0416200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGACAAGGGAGAATGCTCTGCTTCTGCTTCTGCTACACCCTCTGATGAAATCTGGGCCAAGCTTGTTCCGTCAGA CTCGAGATATTCAGATGTTGAGATAAGGTCAGATGAGAAAGTAATATGTTCTGAGATATCAGCTACTTTAAGTGACAAAC ACAGCTGGTGCAAAATAGTAAGGAATTCTGATCTGTGTTCTGCCACGATGGAAAACAACAGTCCAAATACAATACTTGTT GATGGGGCTGAAGTATGCAATGATAACACCATCATTATCAAGGATGGAAGTGAAATCATAGCAGGCCCTGATAAAGAAGG ATTTGTCAGCTATAGATTTCATCTCGTATCTAGCCCAGAAACTTGCCAGAGGCAGCTAAAGATATGTGTAGATGTTGAGC ATGCAAAGTGTAGCATTTGCTTAAACATCTGGCACGATGTTGTTACTATTGCTCCTTGCCTTCATAATTTTTGCAATGGT TGCTTCTCAGAGTGGTTAAGGAGATCACAGGAAAAACGCTCAACCGTACTTTGTCCTCAATGCAGAGCTGTTGTTCAATT TGTTGGAAGAAATCATTTTCTGCGTACCATTGCTGAGGATATGGTAAGAGCTGATTCTACGTTAAGTCACGCAGATGAAG AAATTGCACTTTTAGATACTTATGCTTCAGTACGATCAAACCTTGTTATCGGGCCTGGAAAGAGAAGTCGAAAGAGGGCT CAGACACCCCTGGATGATCAAACAGATGTCACAGGCCATCAGTGCCCCCAGTGTGTAACTGAAGTTGGCGGGTTTCGTTG CAATCATAGCATTGCTCATCTTCAATGTCAAGCATGTGGAGGAATGATGCCTTCTCGTACTGGTTTTGATGTTCCTCAAT ATTGTTCGGGATGTGATAGACCTTTTTGTGGAGCTTATTGGAATGCTCTAGGGGTAACTAGGAGTAGCTCTTACCCTGTT TGCTCCCCAGAGACTTTAAGACCTATCTCAGAACACTCTGTCTCAAGAATTCCTTTGTTAGCACACGAAAAGAATCTGCA TGAACAGAATATCACTGAAAGTTGTATTAGACAAATGGGGAGGACATTGCAGAATGTTATAGCTGAGATGATAACAAAAC TGTATAACGGAGAAATTGATAGAACACGACTGATGCTGAATCATGTGGATACTATTACTTCAAGGACTTTTGTATGTGGT GATTGTTATCAGAAGTTGGTGTCATTTCTCTTGTACTGGTTTCGCATTTCTATACCCAAACGTCTTCTTCCGCCGGATGC ATCAGCAAGAGAAGATTGCTGGTATGGATACGCATGTCGGACACAGCATCGCAGCGAAGAGCATGCTCGTAAAAGGAATC ATGTCTGCCGTCCAACCAGAGGCTCTCATATGTGA
Protein sequence (LotjaGi4g1v0416200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDKGECSASASATPSDEIWAKLVPSDSRYSDVEIRSDEKVICSEISATLSDKHSWCKIVRNSDLCSATMENNSPNTILV DGAEVCNDNTIIIKDGSEIIAGPDKEGFVSYRFHLVSSPETCQRQLKICVDVEHAKCSICLNIWHDVVTIAPCLHNFCNG CFSEWLRRSQEKRSTVLCPQCRAVVQFVGRNHFLRTIAEDMVRADSTLSHADEEIALLDTYASVRSNLVIGPGKRSRKRA QTPLDDQTDVTGHQCPQCVTEVGGFRCNHSIAHLQCQACGGMMPSRTGFDVPQYCSGCDRPFCGAYWNALGVTRSSSYPV CSPETLRPISEHSVSRIPLLAHEKNLHEQNITESCIRQMGRTLQNVIAEMITKLYNGEIDRTRLMLNHVDTITSRTFVCG DCYQKLVSFLLYWFRISIPKRLLPPDASAREDCWYGYACRTQHRSEEHARKRNHVCRPTRGSHM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 461 | 443 | 1.6E-148 | – | |
| PANTHER | 19 | 461 | 443 | 1.6E-148 | – | |
| SUPERFAMILY | 122 | 188 | 67 | 8.72E-14 | – | |
| Gene3D | 129 | 207 | 79 | 1.9E-14 | ||
| ProSiteProfiles | 137 | 182 | 46 | 12.283 | ||
| SMART | 137 | 181 | 45 | 7.9E-7 | ||
| Pfam | 137 | 181 | 45 | 3.0E-8 | ||
| Gene3D | 221 | 313 | 93 | 5.0E-7 | – | |
| Pfam | 255 | 418 | 164 | 2.4E-47 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi4g1v0416200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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