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LotjaGi4g1v0425500.2

Overview

Field Value
Gene ID LotjaGi4g1v0425500
Transcript ID LotjaGi4g1v0425500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT1G63500.1 kinase with tetratricopeptide repeat domain-containing protein; Swiss-Prot: sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260; TrEMBL-Plants: tr|G7LHC7|G7LHC7_MEDTR TPR domain kinase; Found in the gene: LotjaGi4g1v0425500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:80029458..80033953) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGTTGTGAATTCTCTAAATGCTGCTGGGGTGCAGAACAAGGGGATCCTGTTCCTGAGCCTCAAGTTGATGGTAAGTG ATAGATGTTGTGCCACCTTCCTGTTCTTGCTGCTCTGAGAATGGTTGCTGATTCTGTGCTTATTTTTTTTTCTGTTCAGA AACTGAAGAAAATGTTGAGGGCAATGGGTTGTCGTCGTTTCATGAATATACAATTGATCAGCTTAAGAATGCTACCTCTG GATTTTCAGTTGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCTAATGTTGTATATAAAGGGAAACTTGAAAATCAA ATGAGAATTGCAGTCAAACGGTTCAACAAATCAGCCTGGCCTGACGCCCAACAATTTTTGGTGAGCATGCATCGGTTTAT GTGCCAATCCCGCGCAAAATTGTTGTTTTAAATGTTCGTTATAAATATCCGTTGCAGGCTTTGTTGTATCCTTTGCATTT TAATGGCGCGCAATCTCTAGTTGGTTTTATGGTACTTTTGTCGGTTTTAAGGGCCGAAGTAGGTGGTTTTTTGTTTTTGT GCATGAGTCTACTCCTGATGAAGACACTGCGTGTGATCCTACGGGATCAGGGGGACGGCTGAATGAGTAATTAGACTGTT TTATGCATGTGTATGTTTCTCAGTATTTATTGTTTTTTCGTTACAGGATTTTTTGTCTGCTATACATTTTAATGACGTTG CGATCTCTAGTTGCTGCTACCGAACTTTTGTCGGTTTTAACAACTGATTATTTTGTATATTTGTTTGTGCGTGAGTTTGT TCCTACTGAGACACGTGAAGATCCTACGTGGTTCAGGGGAATGGCTGAACCGATTATTAATTTGTCATGTCTGTGTGCAT GTTTGTTGTTTGTTTTTGCATATTTCTAGCAGTAAAATGGATTTGCAACTTAGGATTTTCTTTTACATACAATTTTCCCT CATTTTGACAATTTCTGCACACATGGTTTGTGATGTGGTTTTCTTTCATTAGCTTATCAAATAACCTGGTAACCCCCCTT TCTCTCTCTTCAGGGAGAGGCCAAAGCTGTTGGTCAGCTAAGGAACCCAAGATTGGCAAATCTGCTTGGATGTTGCTGTG AAGGTGATGAGAGGCTACTTGTATCGGAATATATGCCCAATGATACTTTGGCAAAGCACTTGTTCCATTGTAAGTCTATA GCTGGGTTCTCCTGCATTAGCTTTGACATTTACTTGTTTGTAATTCTAAATACAACCCTCATCCTAGCAGTGTCTGAAAA CAATCTTTTGTTGAAAGTCAGTGACTTAACTAAGCAGTTAGGTGAACTGTAGTCATGATTATTTGTTGCGATTGCTTCTT GTTGTCATTCTCTTTCATTTAGTTGAGTGACTTTTCTTTTAATGATTTCTTACACAATTATGTAGGGGAAACTCAGCCCA TGAAATGGGCAATGCGACTGAGAGTTGCTTTGCACCTAGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCACTA TATCACGATTTAAATGCTTACAGAGTTCTTTTTGATGATGTAAGTTCATTTCCTGTACCTTTGGTGTGATCATTTTTGCT CCAGGATATGGTGTTGGTGGATGGTGGTAAAAGATGCAGATATGTTAATATTCTTTTATCCTTAACAGTTAATATCCTTG GAAACAATCTGATTAGTGCAATCAGTTGCATAAAAATTAATAAATATCAGATAGTATTGACTATTGATAACACTTCCCAT AACAAGTTAATGGGTAAACATTTATTTTCTCAACTTTCTGTCTTCGATTGTGAATTAAGTTAAAATCATTATTACACAGC TACTGGAAAGGCATCCAAGGTCCATAGTTCCCATTAAGCCCAGATAGTAGTACAAATTAAATTATTAAATCTACTATTTT TGTGGAATAGGAAATGATGTCATAAGCTTATAACCACCAACACCATTGTCCTGTATTACATTGCCTATAGAGTGGGTGAA GACTAGGTTAAAGAATAAGTGGCTTTATACTTTGATTAACAAACAAGGAAAAGACAATGATAGTAGGTGAACCGTGAAAG CAACATTCATAAACTTCCGTGTTCTGAGCCTAGTAAATTTTGACTATCCTTATTTTTTTTCCTTGTTACTCAGGACTACA ATCCTAAACTTTCATGCTTTGGTCTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACGAACTTGGCATTTACTCCG CCTGAGTATCTGAGGACAGGTACTCCCTTAAACCAAATATAACTTTTGTTACTTATATGTCTGTGTGTGGTGATCAAACT TCAGTACGGTGGGCATCGGTTTTGAGATACAATAATCAATCTCACTCTTGTTAGTCGTAACAGTTGTTTCTGTTCCTCCT CATCTTAAAAAATCTCTTTGACCAACTCTTCTGCAAAATCTAATCTTTTATCAATTTACTGCTTTAATGTTTCTATTTGT AAGCTTTTAATCCATGGTTGTGTTGTTCCGTGGGGGGTTTTCCTCCTTCTGATGTTGTTGGTGTTTTATCATGTTTGGCT AGAACTAATTGTGCAGTGGCCCTGTTCTATTTATCTTAATGGTCATAAACTGGTTCATATAATATGTTTATGTCATTTCA AACTTAATGTTAGTGGAGTTAATGATATAATTCTTATCCCCCTCTCCAAATTGAGAGAAAAAAAGTTCTATGACATGGCA ATTCAATCATGATATTCATTTTATAATCCTTTGTCACAAATATATGATGGCATTGTATCATCTTCATGCAGGTAGAGTTA CTCCAGAGAGCGTAACTTATAGTTTTGGGACCCTTTTGCTTGACCTTCTTAGTGGGAAACATATTCCTCCAAGCCATGTA AGTTTCCTTCGTAGATAAAAAGTTATGCAAATGAGGATCTTGTAATTGAATATGGTGGCCCTTATTTGCTCAAGGGCCGA GTGTTATGTAATGATTTTGATTTTATTGTATATCTGGCATTTACTTTGATAACTTTTGCAGGCGCTTGACCTGATTAGGG ACAGGAACCTTCAGATGCTAACAGACTCATGTTTAGAAGGACAATTTTCAGATGATGAGGGGACTGAATTAGTTCGTCTA GCCTCACGATGCTTACAATCTGAACCGCGAGAGCGTCCTAATCCTAAGTCCTTGGCAACTGCTCTTATACCCCTACAGAA GGATTCTGAGGTTAGCGGTCCTAGTAGTGTTTCAATACTTGAAATGAGGATAACCTATTAAAGAATTCTTTAAGGCTGGT CTAGGATTCTATAGCTGTTCATAATTTGGGTTTTACTGATGTTTTTCTGTTCAATGTCATTGTAAGCAGTCTAAAGTTGC ACGTCAATGGCTTTTGTCTGTTCTTAGAAGTTACAATGGAGACCTTAATTTTGTAAGCTGGAATTAACTATGAATATTCT TATTTTTTAGGTCCCTTCTAATGTGCTGATGGGTATACCAGAGGGCCCTGCATCTTTTCCCCTTTCGCCACTCGGGGAAG CTTGTCTACGAATGGATCTGACTTCCCTGCATGAGGTGCTGGAGAAAATTGGGTACAAAGATGATGAAGGCTCAGCAACA GAGGTTTGTTTCTGATTTGTAAATCATAGAACTTGTAATGAATCATTTAAAGCTTTTGGTCCATTGTTATTCGGGCCTTA AATTATTCATTACTGTTATTTCTTTTTGGTCTTGAATTTATTGGTTCATTTCTCTGACACTTCATTACAAATTAATATTA GTGGGAATGAGAAAGGAGTATTCAATATTCTATGCTTGTACTTGGTAAGTCAATTCAGGAACATTAGAAGAGTTAGGGCC AAATCATTCTGATGACTAAATTTTTTCACCAAAATAAAAATCTGTAAACTATTTTCTGTTTGAGCACCTCTGGTTTCAAT GTAAATGTTGGTCTATCTTAAAATGTTCAATGTTTTATCACATATCTATTATTATTGACCTGATTCTACATGTAGATTGA CTTCTTGCGGGTTTCACTAATTCATTTATTTACTTATTTATTTCTATGAACCAGCTTTCATTCCAAATGTGGACCAACCA GATGCAGGAAACATTGAACTCGAAGAAGAAGGGAGATGCTGCTTTTCGGCATAAGGACTTTAAAACTGCAATTGATAGCT ATACACATGTTAGTAATTTTTCTTGGCTCTTTTGATTAGATGGAAGGATATAAAAAGATCACTTTGTGCTGATGGTTTTG CTGTACAATGCAGTTCATTGAAGTTGGAACCATGGTTTCTCCGACCATGTACGCTCGTCGAAGTCTGTCCTATCTCATTA ACAATATGCCAAATGAAGCACTAAATGATGCATTGCAGGTACAGATAATAACACCTGTTTGGTACATTGCATATTATTTA CAAGCTGTTGCTCTTTTAGCATTGGGCAAGGAGAATGAGGCACAAGTGGCACTTAAAGAGGGTTCTTCACTTGAGACTAA AAAGAACACAAACTAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0425500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTGTGAATTCTCTAAATGCTGCTGGGGTGCAGAACAAGGGGATCCTGTTCCTGAGCCTCAAGTTGATGAAACTGA AGAAAATGTTGAGGGCAATGGGTTGTCGTCGTTTCATGAATATACAATTGATCAGCTTAAGAATGCTACCTCTGGATTTT CAGTTGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCTAATGTTGTATATAAAGGGAAACTTGAAAATCAAATGAGA ATTGCAGTCAAACGGTTCAACAAATCAGCCTGGCCTGACGCCCAACAATTTTTGGGAGAGGCCAAAGCTGTTGGTCAGCT AAGGAACCCAAGATTGGCAAATCTGCTTGGATGTTGCTGTGAAGGTGATGAGAGGCTACTTGTATCGGAATATATGCCCA ATGATACTTTGGCAAAGCACTTGTTCCATTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTGAGAGTTGCTTTGCAC CTAGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCACTATATCACGATTTAAATGCTTACAGAGTTCTTTTTGA TGATGACTACAATCCTAAACTTTCATGCTTTGGTCTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACGAACTTGG CATTTACTCCGCCTGAGTATCTGAGGACAGGTAGAGTTACTCCAGAGAGCGTAACTTATAGTTTTGGGACCCTTTTGCTT GACCTTCTTAGTGGGAAACATATTCCTCCAAGCCATGCGCTTGACCTGATTAGGGACAGGAACCTTCAGATGCTAACAGA CTCATGTTTAGAAGGACAATTTTCAGATGATGAGGGGACTGAATTAGTTCGTCTAGCCTCACGATGCTTACAATCTGAAC CGCGAGAGCGTCCTAATCCTAAGTCCTTGGCAACTGCTCTTATACCCCTACAGAAGGATTCTGAGGTCCCTTCTAATGTG CTGATGGGTATACCAGAGGGCCCTGCATCTTTTCCCCTTTCGCCACTCGGGGAAGCTTGTCTACGAATGGATCTGACTTC CCTGCATGAGGTGCTGGAGAAAATTGGGTACAAAGATGATGAAGGCTCAGCAACAGAGCTTTCATTCCAAATGTGGACCA ACCAGATGCAGGAAACATTGAACTCGAAGAAGAAGGGAGATGCTGCTTTTCGGCATAAGGACTTTAAAACTGCAATTGAT AGCTATACACATTTCATTGAAGTTGGAACCATGGTTTCTCCGACCATGTACGCTCGTCGAAGTCTGTCCTATCTCATTAA CAATATGCCAAATGAAGCACTAAATGATGCATTGCAGGTACAGATAATAACACCTGTTTGGTACATTGCATATTATTTAC AAGCTGTTGCTCTTTTAGCATTGGGCAAGGAGAATGAGGCACAAGTGGCACTTAAAGAGGGTTCTTCACTTGAGACTAAA AAGAACACAAACTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0425500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGCEFSKCCWGAEQGDPVPEPQVDETEENVEGNGLSSFHEYTIDQLKNATSGFSVENIVSEHGEKAPNVVYKGKLENQMR IAVKRFNKSAWPDAQQFLGEAKAVGQLRNPRLANLLGCCCEGDERLLVSEYMPNDTLAKHLFHWETQPMKWAMRLRVALH LAQALEYCTSKGRALYHDLNAYRVLFDDDYNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLL DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPKSLATALIPLQKDSEVPSNV LMGIPEGPASFPLSPLGEACLRMDLTSLHEVLEKIGYKDDEGSATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAID SYTHFIEVGTMVSPTMYARRSLSYLINNMPNEALNDALQVQIITPVWYIAYYLQAVALLALGKENEAQVALKEGSSLETK KNTN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45863:SF21
4 483 480 6.0E-285 –
PANTHER
PTHR45863
4 483 480 6.0E-285 –
Gene3D
G3DSA:3.30.200.20
27 131 105 9.4E-30 –
SUPERFAMILY
SSF56112
34 314 281 7.07E-47
IPR011009
ProSiteProfiles
PS50011
56 308 253 21.687
IPR000719
Pfam
PF07714
69 305 237 1.3E-27
IPR001245
Gene3D
G3DSA:1.10.510.10
133 324 192 5.3E-44 –
Gene3D
G3DSA:1.25.40.10
372 484 113 1.2E-14
IPR011990
SUPERFAMILY
SSF48452
383 477 95 3.8E-13
IPR011990

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0425500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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