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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0431700 |
| Transcript ID | LotjaGi4g1v0431700.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase, putative; TAIR: AT4G23650.1 calcium-dependent protein kinase 6; Swiss-Prot: sp|A2ZVI7|CDPK1_ORYSJ Calcium-dependent protein kinase 1; TrEMBL-Plants: tr|V7CRY2|V7CRY2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0431700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80563213..80567746) extracted from Lotus japonicus Gifu genome v1.2.
TTGACTTCAGCCACATGGGCAACTGCAACACCGGCGGCGGCGGAATCGACGGCGCTGCCACCTACTCCGACGAGCCACCA CACCGCAATGCCCCCACCGTCCTCCCTCCCAACTACCCCTCACCTCCTGCCCCACTCCCGAATCCCCTCTCTTCCTCCCC CTCCTCCCTTGGCCGCGTCCTCGGCCGCCCCATGGAGGACGTCCGCGCCGTCTACATCTTCGGCCGCGAGCTCGGCCGAG GCCAATTCGGCGTGACCTACCTGGTCACCCACAAGGTCACCAAGGAGCAGTTCGCGTGCAAATCCATCGCCACCCGCAAG CTCATCAACCGCGACGACATCGACGACGTCCGCCGCGAGGTTCAGATCATGCACCACCTCACCGGCCACCGCAACATTGT GGAGCTAAAGGGCGCCTACGAGGACCGCCACTCTGTCAACCTCGTCATGGAGCTCTGTGCCGGCGGCGAGCTCTTCGACA GGATCATCACCAAGGGGCACTACTCCGAGCGCGCCGCCGCTAACTCGTGCCGGCAGATCGTTACGGTGGTGCATAACTGC CACTCCATGGGGGTCATGCATAGGGACTTGAAGCCTGAGAATTTCTTGCTTCTCAACAAGAACGATAACTCGCCTCTTAA GGCCACTGATTTTGGTCTCTCTGTGTTTTTTAAGCCTGGTTAGTCACTTAATCAGTTTATTTAAATCATGATTAGTGATG GTTTTATCAACTTGTGGAGTTGAATTTTGTGTGTGTTTGGATTGCACAGAATATTCAAAGCACCTTAAGTGCAAAAGCTA TATGTTTTAGCTTCATTTTGAAGTGAATCTAGCAGATTGTGAAATGAATCCAAACATATTATTTGAGAGCAGGAGATGTG TTTAGAGATCTTGTTGGAAGTGCTTACTATGTTGCTCCTGAGGTGCTGCGTAGAAGTTATGGGCCTGAAGCGGATATTTG GAGTGCTGGGGTTATTTTGTACATTCTGCTATCTGGTGTTCCACCCTTCTGGGCAGGTAAAAGTCCTTCATTCGTTATAA ATGCGCTTTTTGAAGATGGACGGTATAATATCGCATAGTTGCATAGAGTTTAGGATGTTAATGTTCTAAACTTGTTTTTT ACTGCCACCGGTTTCATGAACTATGTTCAAATCATTGGTGGCTTGACTGTTGAGATTGAGATAGCCAAATTAAATTTCTA TCTTAGGCAATTGAGTTATTAATGGATTTATATTTATATATAGATTTAAGTCATAGGCATAGTTGAATGTCGGTCCTGTT TAATATGGTAATTTGTTTAATTTGAATTTCGTGTGTTGTTGAATGGGACATAATTTGATAGTTGTTTGGTTGGTTATTGT ATTTGTGAGTTGTTTGTTGTTCAAATTTCAAATTTCAAATTTCAAACTGAATATGAATTGTTTGGTAATTGAGAGGAACT AATAGAACATATCTGCTGGTCCTAATTTTTGAATCATGCTTAATAGATGGATTTTGTGATAAAGGTGTGAGAATAATTAC TTTAATCACTTCGATGACAAATGGTAAAAAGCCTTCTGCTTTACTTTGAGCTTCAATATGATTAAGTTGGTATCTTCCTA TGGAAGTTAGCTTTGCTTGTACCTTGATATCCAAACTTTGGAACCTTTCCATTCTTTCTCACACTTTGCTCTTATCTTTT ATATGAAGAAAATGAACAGGGTATCTTTGATGCTGTTCTTCGTGGACATATTGATTTCGTATCAGATCCTTGGCCTTCAA TATCAAGTAGCGCAAAAGATCTGGTCAAGAAGATGCTACGAGCTGACCCTAAAGAACGGCTTACCGCAGTTGAAGTACTT AGTAAGTAAAATTCTTCTAACAAAAATGATTTTTTTGGTGTGCCAAAGTGGTTTATATCTTATATTAATAATGTTAACAC TGAGGAAACATCTGGAATTGTTTCCCGTGGGATGAATAACCCTATGATACAGCAAGGTTGAAATAACAAGAAAAAAAATA GGGTGGAAGATTCAAAATAGCTGTCATTTGATTGATTTGTTGAGGACATGGTACTATTTGCACGTCTAAAAACACTTTAG TCCTACTAGCAAGAAAGAAAGGAAAAAAAAGAGAGAGAAAAGAAGGGTAGGTTAGGACGATAGTATTGTTTTTGCTAACT TCTGAACTTTCGATTTTCTCCCTACCTCCTGTTTTGTCTCTCATCACAACCCTTTGATAAGATGTTCTTACACTCTGTGA TTAATATTTTACTTTTGAAATGACTACCAACTTTTCTTGTCAGTTAACTCATTTGAATCAACCAGTAATAACAATGTGTT ATATATATATTCCAGATCACCCTTGGATGAGAGTAGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTGTTATCC AGAATGAAACAATTCAGGGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGGTAAATCATCTTTTTTAATTGATTTTGTT GTCATGAAAATCATAATCAGTCTCTTAAGTAAAATATTTACAGTCACCACTGTATTGAAAGCCTTGAAGATGAGAAATAG TATATGCTAATCCTAAATCCAAAATATAAATAAGCATCCATAACAGAACTAGGTCAAAGAATTGGATGATATGGTTCCTG TTAAACGGTTTCACTTTGTCTGGTAGATAATCTGTTCCCCATTGGCCAACTAAACTATTGAAGTGAAGGGTGTTAAGAGA AAACAAGAGAAATATGATGGAATCCATCTGTCCAAACTACACAACCAAGGATCTATTATATACACTTAAATGTAATGATT ACTATATATTATATAGCTTTATTTACATGATTTCAATGAAGTGCAATTGAAGCAATAGATTTTACATATACACAACCTCT TCATCCATAAATATTTTGTTTTTTTACAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATAATTGGCTTGAAGGAAATG TTCAAATCCATGGATACAGATAACAGTGGAACAATTACTTTTGAAGAGTTGAAAGCTGGTCTTCCTAAATTGGGTAGTAA ACTTTCTGAGTCAGAAGTAAAGCAGTTGATGGAAGCAGTAAGATTATTGTTCTTTTCTTATTTGGTCATATCATAACTTG ATGAATTTTCTTGAAGATTTGGTCTCTATTTGCTGATAGCTGGTGATAATATTTGAAGGTTACATAATATTTCATCCAAT TTCTGCATTTTAACCTGAAGCACTATCTGGGGATTAGAGTTTAGAGTTGAGACACACACTAGTATCTGGTCGCTGAGCGT GGTGACAAAGAGTAGAAGGTTTGCCGCATGATTTTGTTAGCTGATCTGTATGTTCATTTGTGGGGACGAATGCAACCAAA GTCATTGGAATATGATCTGACATATTTATCCACTTCTGCTCTGCTACAACTTTAAATCTTCTGTATTTCTGAGTCCATAG CTGATGTTTGATTGTCACACTGTATCTCTCAGTTCTTGTTGGAAATTTATATTTTCTTGTGTTGCTTCCCGCAGCTAAAT CTCTCTCCCTCTCTCTTCTCTGTGTTTATTTATTATTCTCTGGATCCAAAGGCTATTTTTTCACTTGAAATGAAATTGAT GCTAAACTACTTGAACTTTGCTTCCTGTATCGGAGCTCCTGAGTCCCTGTATATGCCACATATACAGTTTAACTCATTCT TCGCAATCTATCCCCTGTCTTGATAACCATCTGCATCCAAATCTTGCTTCGTGCTTATTAAGACGTGATCGTCATGCATC AATCTGTTGTAGTTATCGATTCCCTTTATTTTTAAACTAAGCCATGTGTCTGTATGCATGTAACAATGTTTAGAAAGGAG GTAGACATACCTTTAGAGCTGCATGATATTGGGATTACTAGTTTACTCCTCTTGATTTTGGTGATGTTTTTTTCATTAAC TATTATCAAATCATAATTATTTGGTTTTCAGGCTGATGTAGATGGAAATGGAACAATTGATTATATCGAATTTATAACCG CTACCATGCATATGAATAGAATGGAAAGAGAGGATCACCTATATAAAGCCTTTGAATATTTTGACGAGGATAAGAGCGGG TATTCTGATTAATTTTTCATTCATAATTTTTCATTGAGTAATGTTATCACCTTAGATGATTTATGTGGTTGGATTTCTTC CGTGTTTTCTCCATTTTCATAGGTACATCACAACAGAAGAGTTGGAGTCTGCCCTTAAGAAGTATAATATGGGTGATGAG AAAACAATAAAGGAGATCATTGCCGAAGTTGATACAGACCATGTATGTTGCTTTCTTTTTATCTTTTTCTTAGTGGCTTA CATCTGTCTTTATATTGTTTCATTCATGAAAAATGGTGTAATACTATTTTCTTTTCATAAAGTAAAGTGAGAAATACTAC TGGGTAGTGCATATCGATACCGAATATGAATTTTTTAGTTTACTATAACTGAGAGCCTGAGACTATAAAAAAGTGTACTT ACAATCCTTGTTGGGTATTGGGGGTATGGAATAGTATCACATAGCGAAAAATAG
CDS sequence (LotjaGi4g1v0431700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAACTGCAACACCGGCGGCGGCGGAATCGACGGCGCTGCCACCTACTCCGACGAGCCACCACACCGCAATGCCCC CACCGTCCTCCCTCCCAACTACCCCTCACCTCCTGCCCCACTCCCGAATCCCCTCTCTTCCTCCCCCTCCTCCCTTGGCC GCGTCCTCGGCCGCCCCATGGAGGACGTCCGCGCCGTCTACATCTTCGGCCGCGAGCTCGGCCGAGGCCAATTCGGCGTG ACCTACCTGGTCACCCACAAGGTCACCAAGGAGCAGTTCGCGTGCAAATCCATCGCCACCCGCAAGCTCATCAACCGCGA CGACATCGACGACGTCCGCCGCGAGGTTCAGATCATGCACCACCTCACCGGCCACCGCAACATTGTGGAGCTAAAGGGCG CCTACGAGGACCGCCACTCTGTCAACCTCGTCATGGAGCTCTGTGCCGGCGGCGAGCTCTTCGACAGGATCATCACCAAG GGGCACTACTCCGAGCGCGCCGCCGCTAACTCGTGCCGGCAGATCGTTACGGTGGTGCATAACTGCCACTCCATGGGGGT CATGCATAGGGACTTGAAGCCTGAGAATTTCTTGCTTCTCAACAAGAACGATAACTCGCCTCTTAAGGCCACTGATTTTG GTCTCTCTGTGTTTTTTAAGCCTGGAGATGTGTTTAGAGATCTTGTTGGAAGTGCTTACTATGTTGCTCCTGAGGTGCTG CGTAGAAGTTATGGGCCTGAAGCGGATATTTGGAGTGCTGGGGTTATTTTGTACATTCTGCTATCTGGTGTTCCACCCTT CTGGGCAGAAAATGAACAGGGTATCTTTGATGCTGTTCTTCGTGGACATATTGATTTCGTATCAGATCCTTGGCCTTCAA TATCAAGTAGCGCAAAAGATCTGGTCAAGAAGATGCTACGAGCTGACCCTAAAGAACGGCTTACCGCAGTTGAAGTACTT AATCACCCTTGGATGAGAGTAGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTGTTATCCAGAATGAAACAATT CAGGGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATAATTGGCTTGA AGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATTACTTTTGAAGAGTTGAAAGCTGGTCTTCCTAAATTG GGTAGTAAACTTTCTGAGTCAGAAGTAAAGCAGTTGATGGAAGCAGCTGATGTAGATGGAAATGGAACAATTGATTATAT CGAATTTATAACCGCTACCATGCATATGAATAGAATGGAAAGAGAGGATCACCTATATAAAGCCTTTGAATATTTTGACG AGGATAAGAGCGGGTACATCACAACAGAAGAGTTGGAGTCTGCCCTTAAGAAGTATAATATGGGTGATGAGAAAACAATA AAGGAGATCATTGCCGAAGTTGATACAGACCATCCTGAGACTATAAAAAAGTGTACTTACAATCCTTGTTGGGTATTGGG GGTATGGAATAGTATCACATAG
Protein sequence (LotjaGi4g1v0431700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNCNTGGGGIDGAATYSDEPPHRNAPTVLPPNYPSPPAPLPNPLSSSPSSLGRVLGRPMEDVRAVYIFGRELGRGQFGV TYLVTHKVTKEQFACKSIATRKLINRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITK GHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLNKNDNSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVL RRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAVLRGHIDFVSDPWPSISSSAKDLVKKMLRADPKERLTAVEVL NHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKL GSKLSESEVKQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDEDKSGYITTEELESALKKYNMGDEKTI KEIIAEVDTDHPETIKKCTYNPCWVLGVWNSIT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 53 | 53 | - | – | |
| MobiDBLite | 25 | 45 | 21 | - | – | |
| PANTHER | 33 | 496 | 464 | 5.6E-273 | – | |
| PANTHER | 33 | 496 | 464 | 5.6E-273 | – | |
| CDD | 66 | 324 | 259 | 9.33945E-135 | – | |
| SUPERFAMILY | 67 | 326 | 260 | 1.75E-84 | ||
| Gene3D | 67 | 150 | 84 | 1.2E-158 | – | |
| ProSiteProfiles | 67 | 325 | 259 | 47.326 | ||
| SMART | 67 | 325 | 259 | 2.2E-97 | ||
| Pfam | 69 | 325 | 257 | 8.3E-73 | ||
| ProSitePatterns | 73 | 96 | 24 | - | ||
| Gene3D | 151 | 330 | 180 | 1.2E-158 | – | |
| ProSitePatterns | 187 | 199 | 13 | - | ||
| Gene3D | 331 | 496 | 166 | 1.2E-158 | – | |
| SUPERFAMILY | 364 | 496 | 133 | 1.19E-38 | ||
| ProSiteProfiles | 368 | 403 | 36 | 15.406 | ||
| SMART | 372 | 400 | 29 | 3.2E-7 | ||
| Pfam | 373 | 433 | 61 | 8.2E-11 | ||
| CDD | 373 | 432 | 60 | 6.15885E-20 | ||
| ProSitePatterns | 381 | 393 | 13 | - | ||
| ProSiteProfiles | 404 | 439 | 36 | 11.724 | ||
| SMART | 408 | 436 | 29 | 0.0034 | ||
| ProSitePatterns | 417 | 429 | 13 | - | ||
| ProSiteProfiles | 440 | 475 | 36 | 13.928 | ||
| SMART | 444 | 472 | 29 | 0.016 | ||
| Pfam | 445 | 471 | 27 | 5.5E-7 | ||
| ProSitePatterns | 453 | 465 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0431700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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