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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0437200 |
| Transcript ID | LotjaGi4g1v0437200.7 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr|A0A0L9TGW5|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81012620..81015299) extracted from Lotus japonicus Gifu genome v1.2.
CTTTATAGGATAAGTCAAACCCTTAAAACTGTTTAAGTAGAGGTCCTCAATTCGAGTCTCTGAATGCAGCTACGTTAAAT TCTTGATAGGGAGAGTTTTACCGCCTATAATGGTTAGTGGAGGACATATGTGGTTCAAAAAAAATACCTTAAAACTAATA AACTTATAATATATAAACGCCGTTAATATTTATTTCAATATCTTGTATTTTGAAGCTTCTGACTTGCATTGCAGCCTCCA AATGCAAAACAATTAAGGCCACAGCTTCTCCAACTGAAGCAGCTCCTAAAAGAGAACAAGATCCGAAAAAGCGAGTAGTA ATAACAGGAATGGGGCTTGTTTCCATCTTTGGCAGTGACATTGATACATTTTACAACAAGCTTCTTGCGGGAGAAAGTGG GATAAGTGTAATAGATAGGTTTGACCCCTCAAAATTCCCTGTCCGTTTTGGTGGCCAGATACGTGATTTCTCTTCAGAAG GTTACATTGATGGCAAGAATGACCGGCGCCTCGATGATTGCTGGAGGTATTGCTTAGTTGCAGGCAAGAGGGCTCTTGAA GATGCCAACCTTGGACATGAAGTCCTTAAGAATGTAAGTTTCAGTGTTATTTTTGAAATTACATTGCAATGATTAGTTTC CTAACTTATGATTGATAACATACACAATAGATGTCATGATCATGAACCAACTATCCTGCAAGTTTAAGCTATTAGGTGAA AACACACGAGTGATTTTATACTATACTTCTAACATGCTCTCGCAAGTTCATTTAGCTTGAAGCATGAACAATACACAAGC TCACTACAACGTTCTTAAATTAAACTTTTTATTAGAATCATGGAGGGATCGAACTCTAGACCATTTACTCATAACTCTGA TGCTTTGTCGTTAACCAATTATTCCAAAATCTTAAAAGTTAATGAGAGAAGATAGATGAATGATTTTATATTATAGTTTT GACAATAGATGCATTGTCTTTATAGCAGATGAACAAAACAAGAATAGGAGTTATAGTTGGATCAGGATTGGGAGGTGTAA CAGCTTTCAACACTGGTGTGGAAGCTCTTCTAGAGAAGGGATATAAGAAAATTAGTCCATTTTTCATTCCCTACTTCATC ACCAACATGGGTTCTGCTTTGTTGGCTATAGATACTGGCCTAACAGGTCCATATTATTCCATTTCTACTGCTTGTGCAAC AGCAAATTACTGCTTTTATGCAGCTGCTAATCAAATCAGAAGAGGGGAAGCAGATGTTATGGTGGTTGGTGGGACTGAAG CTTCAATCGTTCCTTCCAGTGTTGGAGGCTTCATTGCTTGCAGGGCTTTGTCTCAGAGGAATGAAGACCCCAAGAAGGCT TCAAGACCATGGGACAAAGATCGCGATGGTTTTGTCTTGGGTGAAGGCTCTGGTGTGCTGGTAGAACCTAGAACCTAAAA CCCAATTTTTTCTTTAGTAGTATATATATATATATCTTTGATTGACCTAATGAAATTCCAATGGTAACAACTGGATTCTC TATCACTGAGAAAAGGTAATGGAGAGCTTGGAGAGTGCAACAAAAAGAGGAGCCACAATAATAGCAGAATATCTGGGGGG TGCCATAACATGTGATGCTCATCACATGACAAACCCAGGGCCTGATGGACTAGGAGTTTCAATTTGCATATGGAAGAGTT TAGAAAATGCTGGGGTTTCCCCTGAAGAGGTAAGAAATAGAATTCTGTAGTTTTTCACGTCTCTTAGCATAGGTCACTTT AAAATATCTATGTAGCATTAATCACTTTTTTCTAAGTTTACCCTTAATATTTAACGCTCCATACTCAATAATCTAATGCT TATCACTAAATTCTTTTAGTTTTCTTATAGGAGAGAGTTAAAAAAAATATCATTTTCTTATTTAAGACTAACAAATGTGT ACGAATTAGTTACATGTAACTTATAAATAAGAACAGAGGAAGTAATAACAAGCAACCAGGATCAAAATTGGCACATTCCT CTAAAGCGAGTTCAGATTCTCATGTTCATGTAAAGCTGATGAATCCTGCTTTGTACAGGTGACCTATATCAATGCTCATG CCACATCAACACTAGCAGGTGACCTGGCTGAGGTTAATGCAATCAAACAAGTTTTTAAGGACACATCAGAATTGAAAATG AATGCCACTAAGGTAAGAAATTTGTTTACTTTTTAAATATTTCAGAACCTCAACAGCATCCTCTTTTTTACCTTGAATCT TTTCATGACATTTTCTTCCTGTTTCAGTCAATGATTGGTCATGGTCTTGGGGCTTCTGGTGGCTTGGAAGCTATAGCAAC TATCAAAGCAATAACAACTGGCTGGTTGCACCCAACCATTAACCAAGATGTACTTTCCTCAGCCAGAAACTCATCCTATT AATCAAATACTACGTTTTATTTATTGATTCCCTTTATCACTTGATTTACTCATTTTTCCTCAGAACTTGGAGGATTATGT TACAATTGACACCGTCCCTAACGTCAAGAAGCAGCATGAAGTTAATGTTGGTATGTACTATATCTCTGTGCAAATTCTGG TAACAATGTAAAAACCAATTAATGTTTCTGATCTTTGGTGCACTTTCTGCAGCTATCTCCAACTCATTTGGGTTCGGTGG ACACAATTCAGTTGTTGTCTTTGCTCCATTCAGGCCCTAA
CDS sequence (LotjaGi4g1v0437200.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCTTGTTTCCATCTTTGGCAGTGACATTGATACATTTTACAACAAGCTTCTTGCGGGAGAAAGTGGGATAAGTGT AATAGATAGGTTTGACCCCTCAAAATTCCCTGTCCGTTTTGGTGGCCAGATACGTGATTTCTCTTCAGAAGGTTACATTG ATGGCAAGAATGACCGGCGCCTCGATGATTGCTGGAGGTATTGCTTAGTTGCAGGCAAGAGGGCTCTTGAAGATGCCAAC CTTGGACATGAAGTCCTTAAGAATCAGATGAACAAAACAAGAATAGGAGTTATAGTTGGATCAGGATTGGGAGGTGTAAC AGCTTTCAACACTGGTGTGGAAGCTCTTCTAGAGAAGGGATATAAGAAAATTAGTCCATTTTTCATTCCCTACTTCATCA CCAACATGGGTTCTGCTTTGTTGGCTATAGATACTGGCCTAACAGGTCCATATTATTCCATTTCTACTGCTTGTGCAACA GCAAATTACTGCTTTTATGCAGCTGCTAATCAAATCAGAAGAGGGGAAGCAGATGTTATGGTGGTTGGTGGGACTGAAGC TTCAATCGTTCCTTCCAGTGTTGGAGGCTTCATTGCTTGCAGGGCTTTGTCTCAGAGGAATGAAGACCCCAAGAAGGCTT CAAGACCATGGGACAAAGATCGCGATGGTTTTGTCTTGGGTGAAGGCTCTGGTGTGCTGGTAATGGAGAGCTTGGAGAGT GCAACAAAAAGAGGAGCCACAATAATAGCAGAATATCTGGGGGGTGCCATAACATGTGATGCTCATCACATGACAAACCC AGGGCCTGATGGACTAGGAGTTTCAATTTGCATATGGAAGAGTTTAGAAAATGCTGGGGTTTCCCCTGAAGAGGTGACCT ATATCAATGCTCATGCCACATCAACACTAGCAGGTGACCTGGCTGAGGTTAATGCAATCAAACAAGTTTTTAAGGACACA TCAGAATTGAAAATGAATGCCACTAAGTCAATGATTGGTCATGGTCTTGGGGCTTCTGGTGGCTTGGAAGCTATAGCAAC TATCAAAGCAATAACAACTGGCTGGTTGCACCCAACCATTAACCAAGATAACTTGGAGGATTATGTTACAATTGACACCG TCCCTAACGTCAAGAAGCAGCATGAAGTTAATGTTGCTATCTCCAACTCATTTGGGTTCGGTGGACACAATTCAGTTGTT GTCTTTGCTCCATTCAGGCCCTAA
Protein sequence (LotjaGi4g1v0437200.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLVSIFGSDIDTFYNKLLAGESGISVIDRFDPSKFPVRFGGQIRDFSSEGYIDGKNDRRLDDCWRYCLVAGKRALEDAN LGHEVLKNQMNKTRIGVIVGSGLGGVTAFNTGVEALLEKGYKKISPFFIPYFITNMGSALLAIDTGLTGPYYSISTACAT ANYCFYAAANQIRRGEADVMVVGGTEASIVPSSVGGFIACRALSQRNEDPKKASRPWDKDRDGFVLGEGSGVLVMESLES ATKRGATIIAEYLGGAITCDAHHMTNPGPDGLGVSICIWKSLENAGVSPEEVTYINAHATSTLAGDLAEVNAIKQVFKDT SELKMNATKSMIGHGLGASGGLEAIATIKAITTGWLHPTINQDNLEDYVTIDTVPNVKKQHEVNVAISNSFGFGGHNSVV VFAPFRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 406 | 406 | 8.7E-259 | – | |
| CDD | 1 | 402 | 402 | 0.0 | – | |
| PANTHER | 1 | 406 | 406 | 8.7E-259 | ||
| Pfam | 1 | 241 | 241 | 1.2E-51 | ||
| PIRSF | 1 | 407 | 407 | 5.9E-181 | ||
| SUPERFAMILY | 1 | 246 | 246 | 6.58E-65 | ||
| TIGRFAM | 1 | 402 | 402 | 1.3E-153 | ||
| Gene3D | 1 | 249 | 249 | 2.3E-73 | ||
| SMART | 4 | 407 | 404 | 2.8E-12 | ||
| ProSitePatterns | 149 | 165 | 17 | - | ||
| SUPERFAMILY | 209 | 402 | 194 | 1.14E-59 | ||
| Pfam | 250 | 362 | 113 | 1.1E-31 | ||
| Gene3D | 251 | 394 | 144 | 5.6E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi4g1v0437200.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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