Domain Predictions — View

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TIGR03150

Source: TIGRFAM

Description

fabF: beta-ketoacyl-acyl-carrier-protein synthase II

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006633 View details of GO:0006633 AmiGO InterPro QuickGO	Biological process	Fatty acid biosynthetic process	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.	Subterm of GO:0006631 GO:0008610 GO:0072330
GO:0016747 View details of GO:0016747 AmiGO InterPro QuickGO	Molecular function	Transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).	Subterm of GO:0016746

Associated Lotus transcripts 24

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0075349.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-ketoacyl-ACP synthetase I [Glycine max] gi\|351724925\|ref\|NP_001238610.1\|	Domains G3DSA:3.40.47.10 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF226 SM00825 SSF53901 TIGR03150 cd00834 mobidb-lite	17
Lj0g3v0190609.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi\|502086144\|ref\|XP_004488123.1\|	Domains G3DSA:3.40.47.10 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF287 SM00825 SSF53901 TIGR03150 cd00834 mobidb-lite	17
Lj4g3v2214840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] gi\|210110425\|gb\|ACJ07142.1\|	Domains G3DSA:3.40.47.10 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 NON_CYTOPLASMIC_DOMAIN PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF287 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00825 SSF53901 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TIGR03150 cd00834	23
Lj4g3v3014300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 3-oxoacyl-[acyl]-carrier-protein] gi\|356523620\|ref\|XP_003530435.1\|	Domains G3DSA:3.40.47.10 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF283 SM00825 SSF53901 TIGR03150 cd00834	17
Lj6g3v1163990.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plastid 3-keto-acyl-ACP synthase II-A [Glycine max] gi\|59710572\|gb\|AAW88763.1\|	Domains G3DSA:3.40.47.10 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF287 SM00825 SSF53901 TIGR03150 cd00834	17
Lj6g3v1163990.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] gi\|210110425\|gb\|ACJ07142.1\|	Domains G3DSA:3.40.47.10 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF287 SM00825 SSF53901 TIGR03150 cd00834	16
LotjaGi4g1v0024200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|Q9M508\|Q9M508_SOYBN Beta-ketoacyl-ACP synthetase I; Found in the gene: LotjaGi4g1v0024200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF327 SM00825 SSF53901 TIGR03150 cd00834 mobidb-lite	18
LotjaGi4g1v0321700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp\|Q9C9P4\|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr\|D8KXZ0\|D8KXZ0_ARAHY Beta-ketoacyl-ACP synthase II-1; Found in the gene: LotjaGi4g1v0321700	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 NON_CYTOPLASMIC_DOMAIN PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF332 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00825 SSF53901 SignalP-TM SignalP-noTM TIGR03150 cd00834	24
LotjaGi4g1v0321700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp\|Q9C9P4\|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr\|A0A0L9UY00\|A0A0L9UY00_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0321700	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 NON_CYTOPLASMIC_DOMAIN PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF332 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00825 SSF53901 SignalP-noTM TIGR03150 cd00834	24
LotjaGi4g1v0321700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp\|Q9C9P4\|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr\|V7CCC5\|V7CCC5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0321700	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 NON_CYTOPLASMIC_DOMAIN PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF332 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00825 SSF53901 SignalP-TM SignalP-noTM TIGR03150 cd00834	24
LotjaGi4g1v0437100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A151RI86\|A0A151RI86_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0437100	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 NON_CYTOPLASMIC_DOMAIN PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF330 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00825 SSF53901 TIGR03150 cd00834	22
LotjaGi4g1v0437100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437100	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437100	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase, putative; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A151RI86\|A0A151RI86_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	17
LotjaGi4g1v0437200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi4g1v0437200.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I; Swiss-Prot: sp\|P52410\|KASC1_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase I, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TGW5\|A0A0L9TGW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437200	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF330 SM00825 SSF53901 TIGR03150 cd00834	18
LotjaGi5g1v0152000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT2G04540.1 Beta-ketoacyl synthase; Swiss-Prot: sp\|Q8L3X9\|KASM_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase, mitochondrial; TrEMBL-Plants: tr\|A0A072VM15\|A0A072VM15_MEDTR 3-oxoacyl-(Acyl carrier) synthase II; Found in the gene: LotjaGi5g1v0152000	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF297 SM00825 SSF53901 SignalP-TM TIGR03150 cd00834	18
LotjaGi6g1v0221600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp\|Q9C9P4\|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr\|A0A0L9UY00\|A0A0L9UY00_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0221600	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PS00606 PTHR11712 PTHR11712:SF332 SM00825 SSF53901 TIGR03150 cd00834 mobidb-lite	18
LotjaGi6g1v0221600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT1G74960.1 fatty acid biosynthesis 1; Swiss-Prot: sp\|Q9C9P4\|KASC2_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase II, chloroplastic; TrEMBL-Plants: tr\|A0A151SST6\|A0A151SST6_CAJCA 3-oxoacyl-[acyl]-carrier-protein] synthase; Found in the gene: LotjaGi6g1v0221600	Domains G3DSA:3.40.47.10 IPR000794 IPR014030 IPR014031 IPR016039 IPR017568 IPR018201 IPR020841 PF00109 PF02801 PIRSF000447 PS00606 PTHR11712 PTHR11712:SF332 SM00825 SSF53901 TIGR03150 cd00834	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00834	CDD	1	4.17