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LotjaGi4g1v0441100.2

Overview

Field Value
Gene ID LotjaGi4g1v0441100
Transcript ID LotjaGi4g1v0441100.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT3G13690.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|P0DH62|Y4407_SELML Inactive protein kinase SELMODRAFT_444075; TrEMBL-Plants: tr|I1K637|I1K637_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0441100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81467518..81470870) extracted from Lotus japonicus Gifu genome v1.2.

TTCATGTTTGATTATAATTTGTGCATTTCCAGGCAGGAAGGTATGGAGTCTTTCAAGATATACTACTGATTGTGCCACTA GTCATTGGGCATCTCGTTTAGGAACTGCTTCAGATCAGAAAGAAGTTATCACAAATTCTTGTTCTCAATTAGTGCTTCAA CTCCATGACTTCTACGATCCAGATAAGGTTGGAACATGATTATGTAATAACTTCACCATATATGCTTTTTTTATTTATGT TTGGAATTCAGCTATTCTAACCTGTTAAATACTTAAACAGATAAAGATCAGAGTGAAGATTCTTTCTGGCTCTTCATGCG GAGCAGTCGCTGCTGAGGCCAAGAGAGTTCAGTCAAGCTGGATTATATTGGACAGGTAATAAATATAACAAGTACTTTTG TATTTTCACATTGTATGTTAGAGGCTTTTTTCTTGTTTAAGGTTTCTGTTCGTTGAGTCTGTTGATATGCATTATGCAAT GCCATTGGTAAAAGTTTGTTTCTGCTTAGAATTTGGTCAAGTTTCTTATGGACTGAAGAACTATGATTCATTCTTCCACA ATTGCAGAAAAGTGAAGCATGAAAAGAAATACTGCATGGAGGAGCTGCATTGCAACATTGTTGTTATGAAGCGGTCTCAC CCGAAGATTCTACGCTTGAATTTGAATAGTTTTCCAAAGATTGATCTCAACAGGGACTGTCCATTGTCTCTGGAGCCTAA TTCATATACAAGAAACTTAAAAGAAAAATCTGAACATCGAGATAGAATTAAAGGTCCAGCTGTTACTCCTGCTAGCAGTC CAGAGTCAGGGTCACCGCCATTGACTGCTACTGATGTTGGAACATCGTCGATATCAAGCTCAGATCCTTGGACTTCCCCA TTTTTCCACTCTGATAACTATGAAAGACGAATGAGAAGTTTTCCCTTTGTTCACGAGGGTCTGACAAACCTTGAGGTTGA ATCCGACTCAGAGAGTGAAAAGCTAAGTTTATCATCAAAAAGTTCATACTTTCAGCCATGGATAGAAAATGTAATTTGTG CAGATGGTGAGTTACATGAGGAGAGTATACAAAGTTCAAGTGACAAGGCTTTGATTTCTACCTATGAAGCTTTGCTTCAG AGATTCACAACAAAATTGGATCAAGATCCCATTTTAGGAGCGCTTAATTGTAAAATTGATATGAACTTTAGCAAAAGTGT TAGAGAAGCAATTTCACTAGCCAAAAGTGCAGCTCCTGGATCACCCCCATTATGCTCTATTTGCCAGCACAAGGCGCCTG TATTTGGGAATCCTCCAAGGTGGTTTACATTTGCTGAGTTGCAACTTGCCACAAGTGGTTTTTCACAAGAAAACTTCTTG GCTGAAGGTGGTTTTGGTTCTGTACACCGCGGTGTCCTACCTGATGGACAGATCATTGCCGTCAAGCAGTATAAATTAGC AAGTACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTTGAGGTCTTGAGCTGTGCACAGCATCGTAATGTTGTGATGCTAA TTGGGTTTTGTGTGGAGGATGGAAGAAGATTGCTAGTTTATGAATATCTCTGCAATGGATCTCTGGATTCCCATCTCTAT GGTAAATTCCTTTGAATCCGAAGTATTTTATGCTACATTAATAACCTGTACCGGTGATTGCTATATGCTGTTCTTCCTAT TCACTTCTGACTTTATTCTTCATTAGATCATAAGCTTTTTGCATCTCCATACTAATAACTTAGGGTGAAATCATCTGAAA AAAGTTAATTAGCATTATATTCTCTAATGAAAGTTCATCTATCCAATGATCTTAATTCAACCTTGGCCATGGGATTCATC ATAATCTCAATAAAATGTCTTTTAATTGGCAGTTCTTCTGTGAATGTGAATTAATCCAATAACTCTTGAAGTACTGATGT CAACGAAGCTTGTAGCCCTTATCCCTACATACATAAATACATACGTATACACATATATACATTTATGTATGTCTATACGT ATTTATGCATTGCAAATGACATATGTAGTCATCTTTCACGGTTTCACCATTATAAAGAAGATTTTTAAGGGATCATGGTG TTTGCAGGACGAATGCCGAATGTACTGAAATGGTCTGCAAGGCAAAAAATTGCAGTTGGAGCGGCTCGTGGTTTGAGATA CCTTCATGAAGAATGTAGAGTGGGTTGCATTGTGCATCGTGATTTGCGGCCTAATAATATCCTCCTCACTCATGATTTCG AAGCATTAGTACGTCTTATTCTTCAATTACAAAATTTGCTTGTGTTTATATTATTGGCTTCATATTCTTTTTACAGCAAT CACTGACTATTGTTGTAATAAACTGTTTATCTATGAAGCCAAATGTCCACAATGATGCTTTCTAAAATATTATGTCTCAA CTAGCTTTGACTGATTGATTTTAGGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGATATAGGTGTAGAAAC AAGGGTGATAGGAACATTTGGGTACTACCAGATGAAAGTCAAATTATTTTTCATCTCTTGTTTCCCCCTTTATTTTCTTT TGATTAGTTGGAAAAGTGATGGTGGAACTGTTACTATTCTGTAGGTATTTGGCACCAGAATATGCTCAAAGTGGTCAAAT TACTGAAAAAGCTGATGTGTACTCATTTGGGATAGTGCTGCTGGAGCTTGTGACCGGACGAAAAGCCGTGGATATTAACC GGCCCAGGGGCCAGCAATGCCTCAGTGAATGGGTATGGTTTATGCAACTCATGAGTTTAATTTGTAGCCAATTTGTTACT TATTTCAGTATTTAATGTGGATTGAAACATTGAATTTTATAATGTAGTTTTCATCTCTTTGCCAATAACAGAGTAATTAC CTTTGCATTTTCTTTCAAAACAAGCACCTATCATTACTGCTTCGTCATCATCATCATCATAGTTTGTTCAAATATTTGGA TAGGCGCGCCCGTTGCTTGAAGAACATGCCATTCATAAACTATTAGATCCGAGCATAAAGAACTGCTATGTTGATCAAGA GGCTTATCGCATGCTGCAATGCTCCTCTTTGTGCATCCGACGAGATCCACATATAAGGCCCCGAATGTCTCAGGTTGGGA AATTAATTCACATGTTATTGTTAGGTTAGACAATATAAAATCGTTCATGTGTCAAAATGATTAATCAAGTGTTTACTATA GAGTAACAAAAATTGGAGCAACACATCTGAACATGTTTTATGGCCTCACTGTTCTTTCAAAGCATTGGTATTTAGTGGTT CGTTCATCTCTCATTTTTTTCTACTTTATCAAAATAGGTGCTCAAGATGCTGGAAGGTGACATTCTCATGTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0441100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGAGCTGCATTGCAACATTGTTGTTATGAAGCGGTCTCACCCGAAGATTCTACGCTTGAATTTGAATAGTTTTCC AAAGATTGATCTCAACAGGGACTGTCCATTGTCTCTGGAGCCTAATTCATATACAAGAAACTTAAAAGAAAAATCTGAAC ATCGAGATAGAATTAAAGGTCCAGCTGTTACTCCTGCTAGCAGTCCAGAGTCAGGGTCACCGCCATTGACTGCTACTGAT GTTGGAACATCGTCGATATCAAGCTCAGATCCTTGGACTTCCCCATTTTTCCACTCTGATAACTATGAAAGACGAATGAG AAGTTTTCCCTTTGTTCACGAGGGTCTGACAAACCTTGAGGTTGAATCCGACTCAGAGAGTGAAAAGCTAAGTTTATCAT CAAAAAGTTCATACTTTCAGCCATGGATAGAAAATGTAATTTGTGCAGATGGTGAGTTACATGAGGAGAGTATACAAAGT TCAAGTGACAAGGCTTTGATTTCTACCTATGAAGCTTTGCTTCAGAGATTCACAACAAAATTGGATCAAGATCCCATTTT AGGAGCGCTTAATTGTAAAATTGATATGAACTTTAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCCAAAAGTGCAGCTC CTGGATCACCCCCATTATGCTCTATTTGCCAGCACAAGGCGCCTGTATTTGGGAATCCTCCAAGGTGGTTTACATTTGCT GAGTTGCAACTTGCCACAAGTGGTTTTTCACAAGAAAACTTCTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGCGGTGT CCTACCTGATGGACAGATCATTGCCGTCAAGCAGTATAAATTAGCAAGTACTCAAGGAGATAAAGAGTTTTGCTCAGAAG TTGAGGTCTTGAGCTGTGCACAGCATCGTAATGTTGTGATGCTAATTGGGTTTTGTGTGGAGGATGGAAGAAGATTGCTA GTTTATGAATATCTCTGCAATGGATCTCTGGATTCCCATCTCTATGGACGAATGCCGAATGTACTGAAATGGTCTGCAAG GCAAAAAATTGCAGTTGGAGCGGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGCATTGTGCATCGTG ATTTGCGGCCTAATAATATCCTCCTCACTCATGATTTCGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCA GATGGAGATATAGGTGTAGAAACAAGGGTGATAGGAACATTTGGGTATTTGGCACCAGAATATGCTCAAAGTGGTCAAAT TACTGAAAAAGCTGATGTGTACTCATTTGGGATAGTGCTGCTGGAGCTTGTGACCGGACGAAAAGCCGTGGATATTAACC GGCCCAGGGGCCAGCAATGCCTCAGTGAATGGGCGCGCCCGTTGCTTGAAGAACATGCCATTCATAAACTATTAGATCCG AGCATAAAGAACTGCTATGTTGATCAAGAGGCTTATCGCATGCTGCAATGCTCCTCTTTGTGCATCCGACGAGATCCACA TATAAGGCCCCGAATGTCTCAGGTGCTCAAGATGCTGGAAGGTGACATTCTCATGTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0441100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEELHCNIVVMKRSHPKILRLNLNSFPKIDLNRDCPLSLEPNSYTRNLKEKSEHRDRIKGPAVTPASSPESGSPPLTATD VGTSSISSSDPWTSPFFHSDNYERRMRSFPFVHEGLTNLEVESDSESEKLSLSSKSSYFQPWIENVICADGELHEESIQS SSDKALISTYEALLQRFTTKLDQDPILGALNCKIDMNFSKSVREAISLAKSAAPGSPPLCSICQHKAPVFGNPPRWFTFA ELQLATSGFSQENFLAEGGFGSVHRGVLPDGQIIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLL VYEYLCNGSLDSHLYGRMPNVLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEALVGDFGLARWQP DGDIGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPRGQQCLSEWARPLLEEHAIHKLLDP SIKNCYVDQEAYRMLQCSSLCIRRDPHIRPRMSQVLKMLEGDILM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
7 520 514 5.8E-209 –
PANTHER
PTHR27001:SF598
7 520 514 5.8E-209 –
MobiDBLite
mobidb-lite
40 90 51 - –
MobiDBLite
mobidb-lite
46 60 15 - –
MobiDBLite
mobidb-lite
66 90 25 - –
Gene3D
G3DSA:3.30.200.20
220 324 105 2.3E-33 –
SUPERFAMILY
SSF56112
229 520 292 8.06E-78
IPR011009
ProSiteProfiles
PS50011
249 525 277 35.75
IPR000719
SMART
SM00219
249 519 271 8.9E-26
IPR020635
Pfam
PF07714
252 519 268 1.7E-41
IPR001245
CDD
cd14066
255 521 267 3.09188E-99 –
Gene3D
G3DSA:1.10.510.10
325 523 199 2.9E-56 –
ProSitePatterns
PS00109
370 382 13 -
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0441100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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