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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0447400 |
| Transcript ID | LotjaGi4g1v0447400.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase family protein; TAIR: AT4G28860.1 casein kinase I-like 4; Swiss-Prot: sp|Q8LPI7|CKL4_ARATH Casein kinase 1-like protein 4; TrEMBL-Plants: tr|I3S5W6|I3S5W6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0447400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81981407..81984048) extracted from Lotus japonicus Gifu genome v1.2.
ACAGACTACAGAGTCAGTCGCCGTGAGCATACAAACAACAACTCATTAAAAGACACAAATACCCCCACCTCCATGAAGCA TTTCGTGTATGTATATAACCTTCGCTCTCTCTCTCTCTCTATCTATCTCTCTCCTCTTTCTCTCTCTACTGTGTGGCTCT GGTTTCTCTTCTCTCATGATTCAGTGCTGAAAAGCACACCAAAAAACCGAGAACCATCAATAATTCACTTCTTCCCTCTC TCGCACTCTGGTTTGGTTCATAAACCTCACTGTCACTGGCTTCTGGAACCTTCCACCACATGGAGCGTATCGTTGGCGGC AAATACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTTCGGTGAAATCTACCTCGGTGAGTATTCAATTGATTCCACAAC AACTGTTGATTCTTCGTTTATCTGTTCTGATCGCGCTTTTTTCCCTTGCAGCTACGCATATTGATACGTTTGAGATCGTT GCAGTCAAGATAGTGAGTCTCTCTGTTCTTACTTTTCATATTCGCTATCTGATTCTGTGCCCTAATTTATGAACACTATT GCTGATTGCGATTTTTTCGTGTATGATTATATTGCATGAGTCAGTTCTGATTGGTGCTCACTGGCAATTAGGTTTTTAAT TCACATAAAATTGAGTTGTTTACGTGTTTATGATACATTGGTACTTACTAGTTACTACTCTCTATTCGGTGTTGTTGCAG GAGAACAGTAAAACTAAGCATCCACAACTGCTTTATGAGGCAAAACTCTACAATATTCTTCAAGGAGGAAGTATGTATTT TGCAATTTGCAGTGTTAAGCTTCTTCTTTTTTCGCGTGTGTTATTGTTCTAAAATTTTGAATTTGGTCACACTTATTAAT TTGTTGATTGGTATGCAGGTGGCATTCCGGGCACGAGATGGTCTGGGGTAGACGGGGAGGATAACGTGCTTGTTCTTGAT TTGCTGGGACCGAGTCTCGAGGATCTTTTCGTGTATTGTGGAAGGAAGTTTTCGTTGAAGACAGTGTTAATGTTAGCTGA TCAAATGGTATGCTGCTGCTACATTTTGAAAAATTTGGGGGCACAACAACTGACCCTTCATGCTCACTTTTATCTGTTAT AGTCTTGCATTTTACTTCTGAAAACCTGTTAATTTTATCTGTTATAGTTCTACACTTGATATTAATTCTTCTTTTCAAAT TTGGGGCAGATCACTAGAATAGAATATGCACATTCTAAAGGGTTTTTACACAGGGATATTAAACCCGATAACTTCCTCAT GGGACTTGGACGGAAGGCCAACCAGGTAACCTTCTTGTACTTGCCCTTCCTTCCACTATGTATGTATTTGTTAAGGTTCC ATGTATGTGTAATTATGCTGTTCTTTTCAGGTTTACATAATTGATTTTGGGCTGGCAAAACGATATCGGGACTCCTCAAC CAATCGCCACATCCCTTACAGGTAGTTCTATGATTTCATTTTCTTTATTTTGAAGATTCTTTTTCCGTGTAATAATACTC TAACAATTGCAACACAGGGAGAACAAGAACTTAACAGGGACTGCACGTTATGCTAGTTGCAATACTCATCTTGGGATTGG TAAGTCTGAAGTTAGATGTTATTAACCCTTCACCCTGAATGGATGTTAACTCTTGCTGGCTTGCTATATTATTTGCAGAG CAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTTTGTACTTCCTCAGAGGAAGGTGTGCCATTCTGCTCTA CTTGGTTTTTTCCTAATGTATTTTGTCAGTCTAATATCTGTTGAGATGATTGAACGAAATGTCCTAACTTTTATATAACT TATTATTGTGTTCAGTCTTCCTTGGCAAGGTCTGAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTCAGAAGA AACTATCAACTCCTATTGAGGTAGGTGTTTAGGCATTTATTTGCGATGTGAAGGCCTCCTTCCCCTAAAGTCCCAAACAA AACAAAACAAAAAAGATTTACTCTTTTGTTTGTTATTTTCCAAAGGTACTATGCAAATCTCATCCTGTTGAGTTTGCTTC ATACTTCCATTACTGCCACTCTTTGACATTTGATCAGCGACCTGATTATGGATTCTTGAAGCGCCTATTTCGGGACCTAT TTGCTCGAGAAGGTTATTGTTCTTTTCATTATTTGAATAACATATAATCAAAGGAGTTGCGTCTTTCTGTTGGTGTGCTT TTGAATACATTTAAATACTGGGAATTTGATTAACATAATATCTTACTAAGATCAAAGTAAAGGGAACTTTTTTCCTTAAA ATAAAAAATTAATAATATACTCTGTTAGATTATTTAGAAGATGCAACACTTGTACAAAAGTGTTATTTTGATATTTCATT TCTATGCCAAGTATAACCTTTCCTCCCTCTATTTTGCCTTTCTTGATGTATCAGGTTATGACTTTGATTATGTTTTTGAT TGGACCATTTTGAAGTATCAGCAATCACAAAAGAATGCAGTGCAGCCCTCCTTATCTGTAAGTATATTTTTTTCTTTTGC CATGTGCATGTGTGCATGTGTGTTTTTAGGGGAGGGGGGCGCTACTCATGGTTTTGAATCTTGAATCTTTCCATGCTTCT GA
CDS sequence (LotjaGi4g1v0447400.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCGTATCGTTGGCGGCAAATACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTTCGGTGAAATCTACCTCGCTAC GCATATTGATACGTTTGAGATCGTTGCAGTCAAGATAGAGAACAGTAAAACTAAGCATCCACAACTGCTTTATGAGGCAA AACTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCGGGCACGAGATGGTCTGGGGTAGACGGGGAGGATAACGTGCTT GTTCTTGATTTGCTGGGACCGAGTCTCGAGGATCTTTTCGTGTATTGTGGAAGGAAGTTTTCGTTGAAGACAGTGTTAAT GTTAGCTGATCAAATGATCACTAGAATAGAATATGCACATTCTAAAGGGTTTTTACACAGGGATATTAAACCCGATAACT TCCTCATGGGACTTGGACGGAAGGCCAACCAGGTTTACATAATTGATTTTGGGCTGGCAAAACGATATCGGGACTCCTCA ACCAATCGCCACATCCCTTACAGGGAGAACAAGAACTTAACAGGGACTGCACGTTATGCTAGTTGCAATACTCATCTTGG GATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTTTGTACTTCCTCAGAGGAAGTCTTCCTTGGC AAGGTCTGAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTCAGAAGAAACTATCAACTCCTATTGAGGTACTA TGCAAATCTCATCCTGTTGAGTTTGCTTCATACTTCCATTACTGCCACTCTTTGACATTTGATCAGCGACCTGATTATGG ATTCTTGAAGCGCCTATTTCGGGACCTATTTGCTCGAGAAGGTTATGACTTTGATTATGTTTTTGATTGGACCATTTTGA AGTATCAGCAATCACAAAAGAATGCAGTGCAGCCCTCCTTATCTGGGGGCGCTACTCATGGTTTTGAATCTTGA
Protein sequence (LotjaGi4g1v0447400.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPGTRWSGVDGEDNVL VLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYAHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSS TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICQKKLSTPIEVL CKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYDFDYVFDWTILKYQQSQKNAVQPSLSGGATHGFES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 310 | 310 | 1.5E-109 | – | |
| PANTHER | 1 | 304 | 304 | 9.9E-198 | – | |
| PANTHER | 1 | 304 | 304 | 9.9E-198 | – | |
| SUPERFAMILY | 4 | 290 | 287 | 4.86E-84 | ||
| Pfam | 9 | 227 | 219 | 3.5E-27 | ||
| ProSiteProfiles | 9 | 277 | 269 | 28.782 | ||
| SMART | 9 | 278 | 270 | 1.4E-15 | ||
| ProSitePatterns | 15 | 38 | 24 | - | ||
| ProSitePatterns | 124 | 136 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0447400.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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