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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0457600 |
| Transcript ID | LotjaGi4g1v0457600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82886910..82893523) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGACGATGACGAGCTTGATCGGTCTTATCAATAAGATCCAACGAGCCTGCACCGTCTTGGGCGATCACGGCGGTGA GGGCTTGTCCCTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTCGGTGGACAGGTATCTTCTATCTTCTTCTTTTCCACCT CCTTTTTCAAACCATAACTAGCAATGCTTTTGTATTTCTAACTCCTTTGTATTTTTTATGTGGAATGTTAATCTCAGAGT TCAGGGAAATCGTCAGTGCTGGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGTGGATCTGGTAATCTCACCTCACTCTC TTTTCATACTGTTTTCTGCATTTCATCATCGAGATCTATTCAGCAATCACAATGTAGTTCAATAACTAGTAAACAATATA TGTCAACTTCAAACTCTTTTCACAAGCTTCTCAGCTGATGAATTATCGCTTACACATATTTGAAAGTTATTTTCAGCTTA TTTCAAAAGACATCCCAAATAAGCTTATGATTAAGTTCATATGTGATAAGCTTATGGATCCATAAGCGCTTAGTTAAATT GTTTACCCAAACATATAGATATATAAGAAAGGATGCTATGCTGGGTTAGTGGGTAGTAGTAGTAGTGGTTACTGTTTAGG TTACAAAATGCTTCAAAGTTGAGGTGAACTATTACCATCCAGCTTGATACAGGAGTTGTTTGTTGCTAGTTTAACAAGTT TTTGATAAATTTTAAGTTTACTGCAAATAGCTGCTCCTAGGTGATCAATGACTGTGGTCCTTTTTTTTTTCTTCGTGCAT TATTATTTCATTGATGGCAGTGGGAGGGTGATTGCTTTTGTTTCCCTGAATGAATGGCTTTATGACGTTGTCTTTCACTG TTTGTATTGGAAGGTATTGTAACACGGAGGCCGCTAGTGCTGCAACTTCATAAGGTCGAACAAGGGCAGCAGGAGTATGC TGAGTTTCTTCACATGCCAAGAAAGAAATTCACAGACTTTGGTAAATGAAGTTGTTAACCAAGATATTTCCTGTTTCTGT TTCACTAAGATGTGCAATAATGAGTAGCTAGCATCGTGTATGGCTGCTTAAATAATCTTCATTTCGTTTTATAGTAATAT GCTATCATCAGCCAAAGTAGACTTCATCGAGCTTAATGGATAATTTACTCTTGTAGAGGGTGGTAGATTTATCCACTTGT GTAAAAAATTTACCAGTTATTGGTAGGTTACAACAAAAATTCATTCCGTTTCTGACAAACCTGAGTTTCGAACTGGGAAT GATTTATAATACTCACCACATGTCTTGATAATTGAGGCTACAATTATGGTTGGGAAAGATGTAAAACTCTGAAGGATTTA TGATGTTTGTGGTTGGGGATTTAGAATGTTTGTGGTTGGGGATTTACAATGTTTGTCTATGTGTCCATTGTTCAGTATGG CTAACAAGTAACACACGGTTGCAGACTTGCAGATGCATTAGTTTATTCTTTGTAGATTCCAAACCAAATGGTTTTCTTAT GTTCCTTTAATGCCCATGCAGCTGCTGTGAGGAAGGAAATAGCAGATGAAACAGATCGTATAACTGGAAAGACAAAAGCA ATTTCTAACATTCCAATTCAACTCAGCATTTATTCGCCAAATGGTTTGTATTTGCATTATCCATTTATAACATTGATAGA TTAAACTTGGAAGCAATTTGATTGAGGCCTTATCAAATAGTGTAATATTGCCTTGTATGTATTTTTACGATTTAGGAATG CTAGTAACATCCTCTCAAATACTCTATTATTTGGTAAAATCATGTGATCCCTCTAAATTATGTAGGTCCCACTCACTATT TAATGTGAACAACTCCCTATTTGGAGAGATCCATATGATTTTCTCTTTTATCTCAACATCTTCATGGCGTGTTGCACTTG CTGGTTATCTGGAAATAATAATTTCTTTTGGCTGAAAAACATGAAGTTTATCTTTTAATTTGCACCCTCCCTGTTGGGAA ATGGGAATACAAAAGAGACATATTTTCTTCTTCACTAATAATGCCTTCTTTCCATATGACTCTATGGTTTGAGATATTAG ATTAATGATGATTTTTTGGGGCTTTTTCTGCAGTTGTGAACTTAACCCTCATAGATCTTCCTGGGTTGACGAAGGTTGCA GTAGGTAAGCCTTAATATATTTCCCAGTACTATATACAAATTGAGTGGCATTTTGAGAAGACTCATCAGAATTTCTAATG TATAATGAAATTTTGGCTTCTTTGACAGAGGGACAACAGGACAGTATTGTTCAAGATATTGAAAACATGGTCCGTTCGTA TATTGAGAAGGTAACTATACTCTAGAGATACAATTTAAAATTTAATATTGAACAAGCACGATATTGAGAACTTAAACATG GTCCCTTTCTATTGTATTTTTTCCCAGATTCTTAACTGATTCGTAACATTTACCTCTCTGATGTTTCTCATAAACTATCT AATTGAGTTCTTTGATTGTGTAGCCAAATTGCATTATCTTAGCTATTTCTCCTGCCAATCAAGATATTGCCACTTCAGAT GCCATAAAAATTGCAAGGGAAGTTGATCCTTCAGGTATGGTTGTCTATGCTGCATGGAATTCCAAGAAACACTATGTTTT TCCCAATGTCTTTTTTTTAATTTCTTCTTTTATTATTATTTCAGGTGAAAGAACATTTGGTGTGGTTACAAAACTTGATC TTATGGACAAAGGAACAAATGCAGTTGATGTATGATTTCTATAACAACTGCATGATTATCTTCTGTTTTGGTCTTCAATA ACTTCAATTGATTTCAATGTAATTAAGTGTGAACTTATAGTTTATCAGTGAGTGTAAATTGATGGGTGTTATTCATGTGA ATCTTGAAGGTTCTTGAGGGAAGGTCATACAGACTGCAGCACCCATGGGTTGGAATTGTGAATCGTTCACAAGCTGATAT TAATAAAAATGTTGATATGATTGTTGCTCGTAGAAAGGAACGTGAATATTTTGAGACAAGTCCGGAATATGGACATTTGG CACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGGTATTTTCATTAGTTTTTTTTTTGATAGGCATTTTT ATTAGTATTTTCTATTTCATTCCAGTCATTTTCTCTAGCATTTTTATTATGTTACTAAACTTACTATTGTTAAATGGTTT TCTAATTCATTCTATGATCACCGACTTTCTTTCCTTTCTTTAACCGCCTTTTATGACTTCAGCATTTGGAACAAGTTATC AGGCAGAAGATACCTAGTATCATTGCCTTAATAAACAAGACCATTGACGAGCTTAATGCCCAGTTGGACCTTATTGGCAG GCCGATTGCTGTGGACTCCGGGGTCAGAACTGAGATCTGAAATTAATTTTCTTAGATTTGAAAGTAGTCGATTCCTGGTT GTGCATGTGAACTAAATTGTGCTACTTGTTTATGTAGGCCCAACTATACACCATTTTAGAGATGTGTCGTGCTTTTGACA AAGTATTTAAGGAACACCTAGATGGAGGGTAAGTTCTGTATTAAGTCTTAGCATTACCTTGTATTATGCAATTGTTTTCT TTTCCAAAGAATGAATTTATACGTTATTTTTCCTGCTTATACTGTTAACCTTTGGAGCTAATCTAATTGATTACGTCACC AACTGCTATTTCAGACGTCCTGGAGGTGATCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTTTAAAAAAACT CCCCTTCGATCGTCATCTGAACTTAAAAAATGTGCAGAGAGTTGTGACAGAAGCTGATGGGTATCAGCCCCATCTCATTG CTCCAGAACAGGGTTATAGAAGACTTATTGAAGGGTCTATCGGCTATTTCAAAGGCCCAGCTGAAGCTTCTGTGGATGCT GTAATCTTCTTAACTTTACTATATTTTGCTACAGACTGTCATTCTGTTTCTTGGTCTCTTACTCCTACGTGGTAGAATTA CAAGATATTAAATACTTGGTTATATAAACATCCTTCACCTTTACGTGCTTTGTATTCTTTTCAAAAGAATGCTTTATCTC CTTTCAAGTGGTACATCTTTTCAGTCTAAGTCATGACAAGAGGTGATTTTGAAGGACTTCAAGACCAAATGTTATTCTTT TAAATCATAAATTATCATGAGCATACAAATCCATCTATCAAGAATGTCTTCATAATTTCCTCTTCTTTTCCACCACATCA GTCCAAATATGGTCATTGGTAAAACTGAATTTGCATGCTCCTAAAATCCTGCTGTCAAATTCATTTTGCTTACTCCTCTT TTCTGATGATAGATCATTTCCCAAAGTTGGAATACAGTTGTCTTCAATTCCAAAAACCGTAACTTTGAAATCAGCTTTCT TCGTACCCATTGTGGTATTTGGCAGGCTTCAGTCTATCACATGATGACTTTTTACCAGTGTTTTTTATTCTCCTTTTCTT CCTGTTACTGAATGAAAGAAGGAAGAACTTACTCTGCAAAAAAACGGTTTTCGTCATTCACATTTTATGTAACAACCATT TGTTTACTTTTTCTTGTTAAATTGCCTGGTAAGATTATGTTCTTTGCATTTGTTAATTACATGATTTCTGCTTCTATTCT TCAGGTCCATTTTGTCTTAAAAGAACTTGTACGGAAGTCAATTGCAGAAACTGAGGTAAGCAATATTAATATAACTCTTT CCGACAAGTCATTTTTTCAAATGAATAGTTCTAAATCCTCCCTACTTCCTCCTTCTATTTACTAAATGGAGAAAGTATTG AATTTTTTTATATTTCCATTAAATCATATGCATTTATTTTTTCATTTAATATATTCTTTATATAGTAGAAGGAGGATTTG TAGGAATATACATAAAAGAGTATAACATTGTTCTTTTCTAATATATGCATGCAAGTTGGATGAGACTGTTCTTATTCAAC ATTTAATTCATCTCTGTCAGTGTTGATTATGGTGTTTCTTTTCTTCGAAGAAAAAATTAGTGAATGTTCAAGAGATAATG ATGCTGGACATTCATATCTTAGCACTAAATAACTGATATTAGGTGCCCGTCTCAGGCCTGTAAATAGTACCTGGGAACAT TCACTTTAGGTTTTGATGGGCCGCCGTAATATTTTTTATTTTTTTTGGGCGTGGGGAGGACACGAGGAAATGAATCTCAC AGGTGTGCAAATTCATGTCATGTAGGAATTAAAAAGATTTCCTACGCTTTCAAATGATATAGCAACCGCTGCAAATGACG CTCTAGAAAGATTCCGTGACGAAAGCAGGAAGACAGTTACACGGTTGGTTGATATGGAGTCTAGCTATCTTACAGTGGAA TTTTTCAGGAAGATTAATCTTGAACCAGAAAAGAATCCAAACGGACCACCAAATGCAAATCGGAATGCTCCTCCCCCCAC TATGGACAATTATACTGACACTCACCTCCGCAAGATTGGTACATAGTGTTCTACAAGCCTTCTCTCAACATTTACATCCT TTATGAAAAGTAAAGGCTGTTTTAATTTATTCGTCATATTCCTACTTATTTTGGATTTTGTTCGACACTGTTTAAGCTGA TCTGTAAAGTTGGACATTGATTATTCTGTTTGTTAAAATATATCATGCTCCTTGTTTCAGGATCAAATGTAAATGCATAT ATTAACATGGTCTGTGATACGCTTAAGAATACTATACCAAAGGCCGTAGTTTATTGTCAAGTTAGAGAGGCCAAGAGATC ATTGCTGAACTACTTCTACGTTCAAGTTGGGAAGAAGGAGGTATGATTTTATATCTTTTGGTTAAATTTTTGCCATCTTA GACACAATTTCCTTTAAGCTGTTCTTTTCATGGTATAGATAAGGACTTGTGTTGGGCTAGCTTGAGTTTACTTATATAAT TATATTACAAGTTTGTATATCCATGGAAAACTTAATGAACTTGGTCCAAGTATCTTGGAGAGCTTACAAATTGATTGTTT GTTTGTTCATATCACGGAGAACGTGTAGTAAACGCCGGATGCGGTGAATCTAATTATTTCACCAGATTAAATATTTGAAT CTATTGATAGAGATATGGACATGGTAAAACATTGGCCATGAAGTTACTATCTCTATCATTTAAGGCTCCCCGGGTATTTA TACTATTGAACCATGTTTAGTACACTGCCCATGTGGAGTATAAGTATTTTGTGGAAAAGACAATAGAAAGCTGGCTACTT TCCTTTTTAAGATTGTTTAAGCAAGATATAGCATGTCCGGATCAGCTTGCAATTTTGACAACCAGACACATAAGCTTCTC CCCATAATTAATTTTGCCTTTAGAATCAACTGTAGATGGATTTCCAAACATGTACAAAGTCAGACTCAATATTAGCGATT TGTCTTGCTTGTTGGTGTAAGATTGATGAAAGCATATGTTGATTGCAACATTGTGTGTGGTAAGAACTGATTTTATGAGC TAATTGTGCAGAAGGAGAAATTGGGAGCTATGTTGGATGAAGACCCAGCTCTTATGGAAAAGAGAACACAAATAGCTAAA AGGCTTGAATTGTACAAGCAAGCTAGGGATGATATTGACTCCGTGGCTTGGAAA
CDS sequence (LotjaGi4g1v0457600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCCGTTCGTATATTGAGAAGCCAAATTGCATTATCTTAGCTATTTCTCCTGCCAATCAAGATATTGCCACTTCAGA TGCCATAAAAATTGCAAGGGAAGTTGATCCTTCAGGTGAAAGAACATTTGGTGTGGTTACAAAACTTGATCTTATGGACA AAGGAACAAATGCAGTTGATGTTCTTGAGGGAAGGTCATACAGACTGCAGCACCCATGGGTTGGAATTGTGAATCGTTCA CAAGCTGATATTAATAAAAATGTTGATATGATTGTTGCTCGTAGAAAGGAACGTGAATATTTTGAGACAAGTCCGGAATA TGGACATTTGGCACATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAACAAGTTATCAGGCAGA AGATACCTAGTATCATTGCCTTAATAAACAAGACCATTGACGAGCTTAATGCCCAGTTGGACCTTATTGGCAGGCCGATT GCTGTGGACTCCGGGGCCCAACTATACACCATTTTAGAGATGTGTCGTGCTTTTGACAAAGTATTTAAGGAACACCTAGA TGGAGGACGTCCTGGAGGTGATCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTTTAAAAAAACTCCCCTTCG ATCGTCATCTGAACTTAAAAAATGTGCAGAGAGTTGTGACAGAAGCTGATGGGTATCAGCCCCATCTCATTGCTCCAGAA CAGGGTTATAGAAGACTTATTGAAGGGTCTATCGGCTATTTCAAAGGCCCAGCTGAAGCTTCTGTGGATGCTGTCCATTT TGTCTTAAAAGAACTTGTACGGAAGTCAATTGCAGAAACTGAGGAAATGAATCTCACAGGTGTGCAAATTCATGTCATGT AG
Protein sequence (LotjaGi4g1v0457600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVRSYIEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRSYRLQHPWVGIVNRS QADINKNVDMIVARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAQLDLIGRPI AVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHLNLKNVQRVVTEADGYQPHLIAPE QGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEEMNLTGVQIHVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 154 | 154 | 6.0E-56 | – | |
| SUPERFAMILY | 1 | 145 | 145 | 5.91E-30 | ||
| Pfam | 1 | 48 | 48 | 6.0E-12 | ||
| PANTHER | 1 | 284 | 284 | 4.5E-190 | ||
| CDD | 1 | 136 | 136 | 4.24478E-57 | ||
| PANTHER | 1 | 284 | 284 | 4.5E-190 | – | |
| ProSiteProfiles | 1 | 136 | 136 | 25.985 | ||
| PRINTS | 18 | 36 | 19 | 9.2E-23 | ||
| PRINTS | 37 | 53 | 17 | 9.2E-23 | ||
| Pfam | 58 | 279 | 222 | 1.5E-50 | ||
| PRINTS | 60 | 79 | 20 | 9.2E-23 | ||
| Gene3D | 161 | 287 | 127 | 1.7E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0457600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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