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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0004500 |
| Transcript ID | LotjaGi5g1v0004500.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|K7MP25|K7MP25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0004500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1092559..1102609) extracted from Lotus japonicus Gifu genome v1.2.
ATGATTGCAGAGGGCTTCGAAGACGAGGAGAAATGGCTCGCCGAGGGGATCGCCGGCGTTCAACACAACGCATTCTTCCT CCATCGCGCACTGGTATTTGTATTTCCTTCCTTTTTCGCAACCTAATTCATTCCCTTTTCCAATTCTCTCTTTACCGAAT CCAATTGAATCGCAGGATGACAATAATCTCAGAGACGCCCTCAAATACGCAGCGATGATGCTATCGGAGCTTCGAACTTC TCGGCTCTCACCTCACAAATATTATGAACTCTGTAAATTCTTCGAACTTCTTCACATCATTCATTCATGCTGTCATATTA GACTCAATTCTTCATTTCGATTTCCTGCTTCTTGTGCTTAAGATATGAGAGCCTTCGACGAGCTCAGGAGGCTCGAGATC TTCTTCAAAGACGAAACCAGACACGGTGTTGCCATTGTTGATCTCTATGAGCTTGTTCAGCACGCTGGAAATATATTGCC TAGACTGTAAGTGTTTTTTCCCCTGCAATGAACACCAATCAATGTTTGTCTTTTAATCTGAACTTGAATGGTTGTGCAAT TTCAACAATTGGCATTAGTTTATGCATGCTTGTGACTCTCTTGTTGTTAATTTACTGCTAGGTATCTTCTTTGTACGGCA GGATCCGTTTACCTCAGATGTAAGGATGCTCCTGTAAAGGACGTTCTTAAAGATCTAGTAGAAATGTGCCGCAGCGTTCA ACATCCAATTCGTGGTCTATTCTTGAGGAGTTACCTGTCTCAAATCAGTAGAGACAAGTTGCCTGATATCGGCTCTGAAT ATGAAGGCGGGTAAGGCCGTTAATTGCTTTTGTTTAGCAATGCATTAATAGTTTGTTTATTGCCTTACGTTTTTCCATCT TTTTAATTAAATAGTAGATTGTAATTAAAATGTCACTAGAAAAATAACATTTCGTTATGTGTACTTCCACTCCTACATGT GATGTAACCATTTTTTTTGTTTCACTTTTGATTGTCGAAGATTTGTATTGTTGGTCTTATATTAGGTTAGGGTGAATAAG AATTAAAAGAACGGAGATTAATAGGTGCCGCTTTTTCCCTGCAGGGATTCTAACGGTGTGATGGATGCGGTTGAATTTGT TCTACAAAATTTCACAGAAATGAATAAGCTTTGGGTTCGATTGCAGCATCAGGTTCTTTGAACTTCTCTAGTTCTTATAT AATCTTACCTTATAAGATGCATAGCACCACAGTACTTGCATGCCATAGCCTTAGAGGTAAAAATAAATCATGAGAACATG ATTTCTGGCCATGCAGGTGTTATGGTGTTTGTGGATCATGCTTAATCTTTGGGGATCCTGAGCTGAGGCCTTCAATTGGG CTTTCTGGTCTGCAGGGACCTGGTCGGATAAGAGACAAGAAGGAAAAAGAAAGGAATGAGCTTCGCGATCTTGTAATATA AGAATACGATTCTATCTCCTGATGAAGCTGTGTGCTATACATTTGATAGATAAGTTATGGGGTTTCCTTTTGTCTAATTA CTAGGTAGGGAAGAATCTCCATGTTCTCAGTCAAATAGAGGGAGTGGACCTTGAAATGTATAAAGACACCGTCCTTCCAA GTGTCTTAGAGCAGGTCTAATAAAGTACTTTTTCTCCCCAAAGAATAATTTTCCTCATATTGTATGCCATGATGTTGTAA ACTTGTAATGTATCTTGACTGTCTAAATTGGCTTTAGCAGGTTGTCAATTGTAAAGACGAGCTTGCCCAATTTTATCTCA TGGAGTGCATAATCCAGGTTTTTCCAGATGAGTACCACTTGCAGACACTTGAGACACTGTTAGGTGCTTGCCCCCAGTTG CAGGTGGGTAACTTGATTAATTGGAAATAAATGACCCTTTATGTGCTTGACATTTGAAAAGATATACTAGAGAGACTGGC CAGCCTTTCAGATGCATAGTATTCTGGAGATTTTATTCCTTTCACCATGTACAGATTATTTTTCAGTGAATAATATTCAG GAATTTATTCCTTTCAACTTTGAACTAAAATTCTGTTGCTGCTCACAATCTTCATGAGGTGGGGGGGATTTCAATTTCAC TTCTTATTATTCAAACACTTTTTACAAATGAAGGAGTTTACATTGATGAAATCTAATTTCTGAAGTTTGAAAATTCTCCA TTTGAACACAACCTTAGTTTTGTTTTTGTTTTTTTATTTTTTGATAGGAAAATGTTAGTTGTTAGAAATGTTAGTAAATT AATCCCTCCTCCGGGTTCGAACCCGGGACCCTTCACCCCACCCAACCCTTATGTTCCTAGCTCTTACCACCTGAGCTATC ATTTGGGGACTAGTTTTGTTTTTCTTAAATGTGCTTGACTAGTGTTGTGGGCTTCTTGCATTGGTGATCACAAAGTTAAC TGGATGGCACGGGTTATACACGTGACTTTCTTTTAGAATATATGTGGTGGGGATTTTCTAACATGCGAAGAGTGAAGCAA TGCAAAAGCTTTCATTGATAAATTTGGTTCTTTTTATCTCTGTTTTTCTTTTAGCTGAAAACCTTTTTCTTCTCCCCTTT GACTGCCTGGATTGTATTTGCAGCCTGCCGTAGACATCAAGACAGTGTTATCTCAGTTAATGGATAGGTTGTCAAATTAT GCTGCCTCAAGTACTGAAGTAAGTTTTATGCAGCATTTGTTGTAAGTTAAGCTTCCATTTGTTATTTATATCCTTCACTT CTCAGGCATTGCCTCAATTTCTGCAAGTGGAAGCATTTGCCAAATTAAGCACTGCAATAAGCAGGGTAAGCTGGCTTTTA TTGAGTTTGCTACTTTACTTAAAAGCTTTTTTTAGAGAGCAACAGAAAAAAGATGTCCTGATATATCTATGGATAGTGAA GAATCAAAATGTGGTGATTTTGACCAATGGCTTTTTTCCTTTTATGATTAATATTAAGGAGTTCCTTTGTCGTGTTGGTA ATAAAACTGAACTTAGTCATTTGAAGACATTTCTGTCGCAGGGATTTCTCTCTACTATAGTTCCCTTCTCTCGTTTTAAA ATATTTATGAAGTTATATGTTTAGACCAGAGGTTGTACAAGTTGGCAGCTCACTGTTAGAAGTACTGCAAATAAAAGATT AATCCTCAGGCTTGTTTTAGGTGATTCATAAAGTTGAGTCTATGTAATGTGGCTATCATGGTTTTTGTTCGGCGCAATAT TTATAACCCCCCCATCCAAAATTCCATTGTAGATCTAGTGACCGTTACGTAATAGTAGACCTTCTGTATAATAGGATGAT TAATTCTCTCAACTTTTCTATGCGGAAACAAAATATTGATCAAGTCATTTGATCTGATAGTTCTAACCTTATTCCCCTCG GAACTCCCCCATCATGAAAAAAGAATGAAGAGGAAGAAAGGAATGCTGCTCTCCTCTTTGTGCCTACTAATTCTGATTTA AGTTGCATGGACTAGGGTATTGCAATCTAAGACCATAACTTGCATTTGACTGCAGGTGATAGAAGCACAGGTTGACATGC CTATTGTTGGAGCAATAGCTTTGCATGTCTCTCTGCTTACATTTACTCTTCGTGTTCACCCAGATCAACTAGATTATGTG GATCAAGTATTGGTATGTCAGAAATTCTTGTTCTGCTATATTTATAAGGCTCTGGGAGGACAGGGTTTGCATCTTAGCTA AGTTGCATCTTTTCTGGAATTTATGCAGGGATCATGTGTCAAGAAGCTTTCTGGAAAACCAAAACTCGATGACAACAGAG CAACTAAGCAAGTTGTTGCACTTTTAAGTGCTCCCCTTGATAAATACAATGATGTTGTGACTGCCTTGACACTTTCCAAT TACCCTCGTGTAATGGATCATCTTGATAATGAGACGAATAAAGTAATGGCAATGGTCATTATCCAAAGCATTATGAAGAA TAACACTTGCATCTCTAATGCTGATAAGGTATTTACTTTGCTATTGGTTTAACTTAACAACAAGTTTGTCTCTTTGTAAC GGGGCTCAATGTGCTTTCTGTAGGTGGAAGTTTTATTTGAACTAATAAAAGGGCTTATAACGGATTTGGATGGAACAGCT GTGGATGAGGTGTGCAGGAGAGTATTTTTGTTTGACTTTTTGTATGACCTGTAATTTTTTAAACATTTATTAAAATTTCT TTATATGTCCAAACTTATTAAATATGTCTATGCTTATTTCCTAAATAAATATATTACTTGCTTAAGCTCAGCCCAATTTA AATACATTATCATTTACCGATAGGTTGATGAGGAAGATTTCAACGAAGAACAAAATTCTGTTGCTCGCCTCATACACATG CTTCATAATAATGACCCAGAGGAAATGTTTAAGGTAACTCTATAAGTGTGTTCAGAGTCAAATTGAATTCCACTAGTTTT TTTTATTATTATCTACTTCACATAACTATTGACACACGGATTTTCAGATTATATGTACTGTAAAGAAGCATATTATGAAT GGAGGACCAAAGCGCCTACCCTTTACAGTTCCTTCCCTAATATTTTCTGCACTTAGGGTATCTTTCTTCCTTGATTGTAC TATTCTTTCAATTTGTTTTTTCACTATTATAATTAATATGCTTCTTGAGTTGAATTTACATGTTAGTGGATATAGAAGAA TTACTTGAATGGAGTTTTTAGGTATTGTCAGGCCATATTCCATAGTAATACATGGCTTCTTTGAACCATGTATGCTAGAG GTTGGGAGTTGGGACCAAGTATGTATTTTGAAAATTACAAATACTCAGGTAGCATTTGGTATACATGTTTGAATAGAACA GAACATAATATATCCTAATCCATGTTTGATGAAAATAATATAGAATGGGTGGGACATATGGTAAAAAAAGAGCGGTACAC TTTGCTTCTACTAAAATGGTGGAACCAAAGATAACATAATAGAACAGGCTGTCCTGTTATGTTTCTTCTGTATGCTAAAC ACTACTTTTATCTTGATGAGGAATTGGCAAGCGCATCAAAATGTATCAATTGGGAAATTATTAAGTAGAGTATGGTCTCA CGAGGAATTGGAATTCAATTATCATTTCTCAAAGTTACAATTAATTGAATCAAGCAATAATGGGATGAAATTGGTTGAAT GAACAAAAATTTAATGAAGAGAACTAGAACTTAAATCAAAGTAATAGGGAAATTTCAAGAAGCTATTAACGTATGGGAAT TCTATGGGTCAATGGTATCTAGGGTTGGAATCCTCTCAATCCTTCCTCAATGTAATTCAAATTACTCGCAGTTCAAGAAA ATATAGTTAAGATTTAACTCACATATTAGGTCAAATCGAAATCCTGGACCTTCAACCCCTTTGTTCAAAACCAAGTACCC TAATTCCTTAGAAACCCCAAATTTGAACAAGCATTATGAACAAGAATTCACATGATCTCTGTTAGATATCTTGTAAATAA ATATGATATCTTTTCTTTATGGTTACTTGGTAACATACTCATGTAATTAAGGAAGTGATCATGTAAATAGGGAAATATAA TATTTCTAGGATATTTTGTATTTCTGGTGCCTATTATAAATAATGACCCCTGTTGTGTAGTTTACACACACAGACTAAAT CCAATGTCTCTCGGTCTCTCCTAATTTTGCAAGATATCGGAGCCAGGTTCGTCCTCTATGACCTGTGCCATCACTATTTT CTGTTGTTGAGAGCATGACGAGAGGCAATCCTAATCCGTCGTCATACCCCATTGTCCATCAGCGCATATCTTTTCCTGGA AACCGTGTCTCTTCTCCGGTTTTTGGCTCTTCCCGCTGTCGTGTTTCATTCTGCCAGTTTTTCTGTTTCACCTGCCGTGT TTCATTCCGGTAGTGTTTCTGACCTTACCGCATGTCGTGACTCATTCTGGCAGATTTTCTGGCTTACCCCAGTGTTTCAT TCCGACGGTGTTTCCAGCTTCTGTCTGCATCATTCCAACAACCTTCTCCAGCCACTTCCACCGCGTCCAGCCCTTGATCC GGCCGTGGCTTGCACCGCCGGATTCACCTCGCTCTCCCAGCTCCAGATCTTCCCTTACTTCTTCCGTTTGAGATATATGC CCCTCTAGATCTGAGTTTTCAACCTCAATTTTGCTGTTTTTCGGCGTTTCTCTCTCCTCTTTGCAACCCATGGCTTCCTG TCTCTCCCACGTCCCATCTACCGATGTTGGGGCTTTGCCGATGTGAACTTGTTTTTCTGTTTGGTGTTTCTCTCTCCGGC AGTTGATTAATTATATTTGTAACAAGCTATGCATATGACATATGCTTCAGCTTAAGGGGGAATGTTAGATATCTTGTAAA TAAATATGTGATGGGTACTTGGAGTTAGTTAGTCAGTTAAGGGTTAGCCTATAGAGTTAGTTAGTTAGTCAGTTAAGGGT TAGCCTATAGAGTTAGTTAGTTAGTTAAGGGTTAGCCTATAAATAAGAGAGTGTGAAGAGCGTTTGGGTATCTTTTGGAT CATTTAGGAAATTGGGACTAGGGAGAGAGTAGAGCCTCTCGAATGCTCTACAACACTGTACATTCTCTCTAATTCCTATT TGGGGATTAGGGTTCATATTCTATAATATCCCAGTTTCTATCTTCTTCTTGACTGGGTTCTATCAATATGATATCTTTTA TTTATGGTTACATGGTAACATAATCATGTAATTAGGGAACTAGGTATGTAAATAGGGAAATAGAATATTTCTAGGATATT TTATATTTATTGTGCCTTTATGGGTCATATTATAAATAATGACCTCCATTGTGTAGTTTTCACACAGAGATTAAATCTAA TATTGTCTCTCGGCTTCTCCTAATTTTACAATTTCATAACTATCAAACTATCAAGCTTATTTGTAGAACTTATCTAATAT GGTGGCTCACTTTAATTCCAATTCCATCCCCAATTTCTGACTTTTGAAATTGAAACTGTATCAATTTTAGGGCGCCCAAT CCAGTATTAAGCACTTACCTAATCACTCAATTAAAACCAATAAGCTTGAATAAAGATACAAGAATCAAATACGCAGAGTT TGGAGTGAGGTTCATCATTCTTTAACCTAGAAAGTTTAGTTACACATGGTAGAAACTAGAAACTAAGATAGTCACTAAAA GAGAAAAGATTAGATGAAACTCCATTACAAATTGGTGAACCCAGCCACTTAGTTCCTCAAAGTTGTGGGTCTTAAGTTCC AATGACACAAGAGAGAGATATGAGCAAATCTCATCATCCCATACTCGTCAGAACTCCTTCAGTTAGTATTCATATCGACT TTCATAACTGATAGCGTGATCATGTTCATTCAATGTGTGGCAGTGCTTTATAAAAGTCCAGAGTATTTTCTAGTCCCAAT TGGATACCTTTGAGGTAGTAAGGTCTAAAGATATTTACTTATATTGTATGCCACCCTCTGGAGTTTGGGGTTTACTTCTT GAGAATGATACATGGGAGTGAAGAACTCAGCTCTTTCTGTGACTTCTTAATTCTTTTTGAATCATGTTTTGCTGCAGTTA ATCAGGCAATTGCAAGGGCAGGATGGAGACGTAGTGGGAGAAGAAGTTCCTTTAACACCCAAAAAAATATTTCAGCTTTT AAATGAGGTGATTTAAAATGTATAATCTTGGTTTCGAACAATAATTTACTTTCTCTCTATAAGCCCAAAGAGGGCGCACA ACTCTAAAATATTCTTGATTGAACTACCTTGAAATACTTTTGTTCGAGTTTATCAGCATGTTGTATAGTGTGTTATGTAA TTTCTGATATTTATGTATTATTTTATGCGCCATATATTGGTATAATTAAAATTATGCGGTGGACAAAAAACATCTACTTT GTTGCAGATCATTGAAGCCCTTTCTTCTGTATCATCTCCTGAACTGGCCCTGAGACTGTATCTGCAATGTGCGGAGGTAC ACTTGACCCTGCAAAATTAAATTATTAAATTGTTATCACTTCTGTTTCCACCTTTCGTTCCGAACTCCCAAAGAAACTCT CAGAAGACCCAGAACAGGGATTTGGATGAAATTAGACTTTGTTGAGAAGTCCCACATTGACTAGAGATATGGCCAAGATA ACCCTTATATATGGGTAGACAATCCTTACCTCTTGAGCTAGCTTTTGGGGTAGAGTTAGGTCTCCCAAATTCTAATAGAC TTGAAAAATGATTCTTTGCTACCCAATCATATTCTTTCGGGGCATAATTTTTCCCCATCACATTGTCAGTTTTGCTCTTT AGTCTGAATGGGGAAATAACTTTCCACACAGGACTTCGCTATACTACTATTAACTTATGTTTTCCTGACATTATTATGAC TCTTTATCCTGATTATGATTAGTCTTTTATATTTGCATAATTGTTTCAGTGACTATTTTTTAAACCTCTTGATTTTCTTT CTGATAATCAGGCTGCTAATGACTGTGAACTCGAGCCTGTTGCCTATGAATTTTTCACACAGGCATTTGTATTATATGAA GAAGAAATTGCGGTAATTATTAATAAAGCAATCAAATTTAAGATTTTCTTTATACAACTAAACTGTGGCCTTCAGTCCTT TACTAATCCGTCTGTTAATGTTGTAGGATTCTAAAGCTCAGGTAACTGCAATACACTTAATTATCGGGACTCTCCAGAGA ATGAACGTCTTTGGTGTTGAGAACAGGGATACGTTAACACACAAGGCCACAGGGGTATATTATTTTTTAATTGTTTTCCA TTTTTCTCTCTTCTTTTTCCTTAAAAGGATTTGTTAAGAAGATGGACGATGATGGAGATGAGTGGGGACAAGAGGGAAGG GAATAGTTCCTCTTGCTTGGGGGTTTAAAAAAGGGAAAGGGAATGTTAGGGCAATCATTTAACTTCTCCCTCAAACTAAG CCACTTATAATAGTAAATAAAAACTAAATTGAAATGTTACACTTCTAATAGGTCTTTCGCATTCTCATCCTTCACTATTT ATTCATACATGTGGAAGGCAACACTTTTCCATGTCATCAACCCCTTCCTATTCTACTTTATTCAATACCCGTCTTCCCAA AACTTCTACCCCGAGTTTGTGAAAAAAATACATTACAAGTTAAAGGAAAATGGGTTGTGTGGCAACATTTATTGAGCTTG AAGTTCTATCTTTTCGCAGTATTCAGCAAAGCTTTTGAAGAAACCTGATCAGTGCCGTGCGGTTTATGCATGCTCACATC TCTTTTGGGTTGATGATCAAGATGGTATTAAAGACGGAGAAAGGTATGCTGGCACATACTCTAATAGGTTTAATTTTTAT GATTTGATTGATTTTATGCACGATGCCTCTTCTTACTTTGTTTATGAAGTCATTATGACCTTTATTCAATATAGCATCAT GGTTCATGAAGTATGAATGCCCATGAATTATCAAATATAATTATGCCTCTGCATAATTGATGCATGAGTTGTTGTCTATT TTGTTTTCTGTTTTTTCCTCTTGGGGTGTGGATGTTGACTGTTTCATTGCAGAGTATTGCTTTGCCTTAAGCGTGCTTTG AGGATTGCAAATGCTGCTCAGCAAATGGCCAATGTTGCTAGGGGTAGCAGTGGTCCAGTGACGCTTTTTGTTGAAATACT GAACAAGTTAGTCACCTTAAGCTATAAAACTGCTTGATATATTATTTTTACTACTTTTTACTTATGGATAAGGATGTTCC AGGTACATTTACTATTTTGAGAAAGGAAACCCACAGATCACCAGTGCTAATATCCAGGGGCTTATAGAATTAATCACGAG CGAAATGCAGAGTGACACTGCATCAGCTCTTCCAGTTTCAGATGCATTCTTTGCCAGCACATTGAGGTACATCCAATTCC AAAAACAGAAGGGCGGTATACTGGGTGAGAAATATGATTCTATCAAGGTATAAATCCTCACTTTGTGCTCGAACTGACAT GTTCGAGATGTCCAAATGTAAAGTTATGTGAAAAGCCAAGCATGTAGTTTATCAGTTTTCATCTTCATCCCAACAAAAGA AAGGGTTATGTCAATGTTCATTACTTGTGCATTAAAATTCCAGTGGCATGA
CDS sequence (LotjaGi5g1v0004500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGCAGAGGGCTTCGAAGACGAGGAGAAATGGCTCGCCGAGGGGATCGCCGGCGTTCAACACAACGCATTCTTCCT CCATCGCGCACTGGATGACAATAATCTCAGAGACGCCCTCAAATACGCAGCGATGATGCTATCGGAGCTTCGAACTTCTC GGCTCTCACCTCACAAATATTATGAACTCTATATGAGAGCCTTCGACGAGCTCAGGAGGCTCGAGATCTTCTTCAAAGAC GAAACCAGACACGGTGTTGCCATTGTTGATCTCTATGAGCTTGTTCAGCACGCTGGAAATATATTGCCTAGACTGTATCT TCTTTGTACGGCAGGATCCGTTTACCTCAGATGTAAGGATGCTCCTGTAAAGGACGTTCTTAAAGATCTAGTAGAAATGT GCCGCAGCGTTCAACATCCAATTCGTGGTCTATTCTTGAGGAGTTACCTGTCTCAAATCAGTAGAGACAAGTTGCCTGAT ATCGGCTCTGAATATGAAGGCGGGGATTCTAACGGTGTGATGGATGCGGTTGAATTTGTTCTACAAAATTTCACAGAAAT GAATAAGCTTTGGGTTCGATTGCAGCATCAGCTGCAGGGACCTGGTCGGATAAGAGACAAGAAGGAAAAAGAAAGGAATG AGCTTCGCGATCTTGTAGGGAAGAATCTCCATGTTCTCAGTCAAATAGAGGGAGTGGACCTTGAAATGTATAAAGACACC GTCCTTCCAAGTGTCTTAGAGCAGGTTGTCAATTGTAAAGACGAGCTTGCCCAATTTTATCTCATGGAGTGCATAATCCA GGTTTTTCCAGATGAGTACCACTTGCAGACACTTGAGACACTGTTAGGTGCTTGCCCCCAGTTGCAGCCTGCCGTAGACA TCAAGACAGTGTTATCTCAGTTAATGGATAGGTTGTCAAATTATGCTGCCTCAAGTACTGAAGCATTGCCTCAATTTCTG CAAGTGGAAGCATTTGCCAAATTAAGCACTGCAATAAGCAGGGTGATAGAAGCACAGGTTGACATGCCTATTGTTGGAGC AATAGCTTTGCATGTCTCTCTGCTTACATTTACTCTTCGTGTTCACCCAGATCAACTAGATTATGTGGATCAAGTATTGG GATCATGTGTCAAGAAGCTTTCTGGAAAACCAAAACTCGATGACAACAGAGCAACTAAGCAAGTTGTTGCACTTTTAAGT GCTCCCCTTGATAAATACAATGATGTTGTGACTGCCTTGACACTTTCCAATTACCCTCGTGTAATGGATCATCTTGATAA TGAGACGAATAAAGTAATGGCAATGGTCATTATCCAAAGCATTATGAAGAATAACACTTGCATCTCTAATGCTGATAAGG TGGAAGTTTTATTTGAACTAATAAAAGGGCTTATAACGGATTTGGATGGAACAGCTGTGGATGAGGTTGATGAGGAAGAT TTCAACGAAGAACAAAATTCTGTTGCTCGCCTCATACACATGCTTCATAATAATGACCCAGAGGAAATGTTTAAGATTAT ATGTACTGTAAAGAAGCATATTATGAATGGAGGACCAAAGCGCCTACCCTTTACAGTTCCTTCCCTAATATTTTCTGCAC TTAGGTTAATCAGGCAATTGCAAGGGCAGGATGGAGACGTAGTGGGAGAAGAAGTTCCTTTAACACCCAAAAAAATATTT CAGCTTTTAAATGAGATCATTGAAGCCCTTTCTTCTGTATCATCTCCTGAACTGGCCCTGAGACTGTATCTGCAATGTGC GGAGTATTCAGCAAAGCTTTTGAAGAAACCTGATCAGTGCCGTGCGGTTTATGCATGCTCACATCTCTTTTGGGTTGATG ATCAAGATGGTATTAAAGACGGAGAAAGAGTATTGCTTTGCCTTAAGCGTGCTTTGAGGATTGCAAATGCTGCTCAGCAA ATGGCCAATGTTGCTAGGGGTAGCAGTGGTCCAGTGACGCTTTTTGTTGAAATACTGAACAAGTACATTTACTATTTTGA GAAAGGAAACCCACAGATCACCAGTGCTAATATCCAGGGGCTTATAGAATTAATCACGAGCGAAATGCAGAGTGACACTG CATCAGCTCTTCCAGTTTCAGATGCATTCTTTGCCAGCACATTGAGGTACATCCAATTCCAAAAACAGAAGGGCGGTATA CTGGGTGAGAAATATGATTCTATCAAGATTAAAATTCCAGTGGCATGA
Protein sequence (LotjaGi5g1v0004500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIAEGFEDEEKWLAEGIAGVQHNAFFLHRALDDNNLRDALKYAAMMLSELRTSRLSPHKYYELYMRAFDELRRLEIFFKD ETRHGVAIVDLYELVQHAGNILPRLYLLCTAGSVYLRCKDAPVKDVLKDLVEMCRSVQHPIRGLFLRSYLSQISRDKLPD IGSEYEGGDSNGVMDAVEFVLQNFTEMNKLWVRLQHQLQGPGRIRDKKEKERNELRDLVGKNLHVLSQIEGVDLEMYKDT VLPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPAVDIKTVLSQLMDRLSNYAASSTEALPQFL QVEAFAKLSTAISRVIEAQVDMPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLS APLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELIKGLITDLDGTAVDEVDEED FNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKRLPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIF QLLNEIIEALSSVSSPELALRLYLQCAEYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQ MANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSANIQGLIELITSEMQSDTASALPVSDAFFASTLRYIQFQKQKGGI LGEKYDSIKIKIPVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 588 | 587 | 0.0 | – | |
| PANTHER | 2 | 588 | 587 | 0.0 | ||
| PIRSF | 3 | 590 | 588 | 1.3E-212 | ||
| Pfam | 12 | 588 | 577 | 2.8E-209 | ||
| SUPERFAMILY | 125 | 616 | 492 | 3.52E-5 | ||
| Gene3D | 480 | 586 | 107 | 1.8E-26 | ||
| PIRSF | 585 | 732 | 148 | 3.4E-43 | ||
| Pfam | 585 | 687 | 103 | 1.9E-33 | ||
| Gene3D | 587 | 714 | 128 | 3.7E-43 | ||
| PANTHER | 589 | 730 | 142 | 0.0 | ||
| PANTHER | 589 | 730 | 142 | 0.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Retromer, cargo-selective complex | The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals. | ||
| Biological process | Retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
Expression pattern of LotjaGi5g1v0004500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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