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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0011800 |
| Transcript ID | LotjaGi5g1v0011800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase obg; TAIR: AT5G57960.1 GTP-binding protein, HflX; Swiss-Prot: sp|P25519|HFLX_ECOLI GTPase HflX; TrEMBL-Plants: tr|A0A0S3RQD2|A0A0S3RQD2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0011800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2632194..2638830) extracted from Lotus japonicus Gifu genome v1.2.
GATTTACCCCTAAGCAAGTATCCAAATTTAAATCCTAGACCAAGGGTACATTGCCACATGTCTCACCCAAGTCGATTGTG ATACACTCTACTTGGCCCCATGACAAACGCAATCCATAATAATCCTTCAGAAATCAAAAAATAGAAGAAGAAGAAGAAGA AAAAAAGAAAGAGTTCTGAAAAACAGAAAAGCTAAGCAGAGATGAGCTTATGCCCGTACGGTTCCGTCATTCAACCACCG CCACTAACTCAACAACAACAACACCGCCACTATCCAATCCCTCTTCTTCGCCATCCTTTACTATGCCGCTCAACCCCTCT CTTTCTCACTCCCAATCACACCCTCATCTCCTCCACCACAACCACCACCACCTCCGTTCTGCACCGCGACCTCGGAGCTG AACTCGCCGCCCCTGACTCCAACGACGCCGTTTCAAACCCCGCAACTGAGTTGCTGGACGCACCACCGCAGCAGCAAAAT GAAGAAGAAGAACCAGCTCCGCAACCGCAAGTAACGAGGTTCAGAAAGAAGAAAGAAGAACAGCAAGACAACGGAGACAC CTTCGATAACCGTTACAAGCTCCGTAATGGAAGGGAGGTCCGTTCTGTTTGTTCCCTTCCTCTCCCTTCAGTTTTCAATT TCATTCTTCGGTTTCGGTTTCTTATGAATTCGCTATTTTTCTCTTCAGGTTTTGGAAGAGAAAGCGTACCTTGTCGGCGT TGAGTGGAAGGGTGATGATGTTGAGGACTCTTTTGGTGTGCAAGAATCTCTGAGTGAATTGGCACAGTTAGCTGACACTG CTGGATTGTTGGTTGTTGGCTCTACTCACCAGAAGTATAACTATAACCACTCATGTTCATTTGTTATCATTGTTCAATTC TCTTAACATGTAATTTACTCTATGGTAATAGGTTTACAGAAGTGCGCTGTTATTGCATCTATCTAATTGTTATCTATGGA AGTTGAATGTTCGAAAGTGATTCAATTGATGTCTGTTGATGTTGCAAGCAAAAAGTGGTATGCAGCAGCACCACAACAGA CATCAATTGAATCACTTTCGAACATTCAACTTCCATAGATAATAATTAGATGCAATCATAGCACACTTTTAGTGCACCTA TTGCTGTAGAGTAAATTAAATGTCAAGAGAGTTGAACAATGATGCTCTTTATTTTAATTGAAAAAGAGCATGTTCATATT TGCATACGTTGTTGAGCTATATGTTGTTGCTTTCTCTTTATACTAATTTACAGATTTCGTTAAAAACTGTTGTTGCTTTG CATTAGACAATAATGTTGACAGTATATAAACAAGCAATCCTATCCTTCTTTGAGAAATTTTAATCGCTAGATAGTATTGT TGGTTCCTTTTTTTTCCTCCCCTTTTGGGGATAACATATTGTTAGTTGACTAAATTTCTGAGATGGTATAAATGGTACAG GCTTGCTTCTCCAAACCCTAGGACGTACATTGGCTCCGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGGGTTGGATG TTGAAACTGTAATCTTTGATGATGAGTTGTCAGCTGGGTATGGGCCCCCCACTTTTTTTTTTCTGTCTCACATTTATGCC ATCCAAATGCATACATCCTGTCCATGCTACCATTTAGTTTGTTGACATTTGATTGTTTCATTTACTGAGCCTGAGAGTGC TTTGTCTCCCGAACCAACCATAAAAGGGTTGTAAAAAATAGATTAATTAGATATTTTTGCTGGCTTTGATTGGAAATAAT TGGAATCAAAATAATATTTCTGTCCATTTAGAAGAAGGTTGCTGTGGAGGTGTTGATTTCTGTTATACTTGTAAGTGATT ATGATGATTACGAAACTTCTGATATTTTAGCATAAAGGTAGTCGGCTAGCATAAACTAAGACCAGGGCTTTTTATGGGTG AGTTAAGCACCAAAGGATTGAGTATTGAGGGATTAGTGTATTTATGGTACAAAAGATCAATTTGCAAGCTTTTGGAGAGG TATTAAGCGGTCAATTGGGGGATGCTTGGAGCTGTGAGCGGCTCCTGTGAAATTTTGATTTTGGGATGATTGAGTTCAAG GGGAAGTCAATCAATGAAATTCAGGTTTTGATTTTGTGGAGTTAATCTGATCTGTTAAGGTAAGAAAATCAAGAAACAGA AAAGTAGCTAAAAAGAAGAAAAAATAAATGATTTGATCCAGGCAACCATAGTTAGATTATAGGAGGATAACTGGAAGCAG ATATTAAAGATTATGACTTGTAAGATGTCTGAGATCATGAAAACTGCCTCAAATCAAAACTGAACCCTAAAAACTGTGAT AATTTTGATATTGAAGCGTAATGGTTTCATGATATGAGTGCATTCCGCATAATTGTTATAATTGTACTCTGTTTTTTTGT TCACCTTATTTTAGGCAACTGAACCAAAATTCATTTTATAATCACATTGTTTCATAAGGAACACCACTCTAGAGCTTACA TAAAATTACTGACCCCTGCTAATTCTAGGCAATTGCGCAACTTGGAAAAGATTTTTGGTGGAGATGTGAGAGTTTGTGAT CGAACTGCTCTTATCCTTGATATATTCAATCAGCGAGCAGCCACACATGAAGCATCTTTACAGGCAATTATGAATTAAAG GGGGGTTTCTCTAGTACCCTTTGTTTTTAATAGGGTATCAGTGTCCCTAATAATTAGTGATCAATATTTGGGCAAGTGAT CCACTTAGTTGACATATAAATGCAACAAAGTTCTTCATGTGGTTTTTTTATTTTTGTATTATCGTTTAATCCCAATATTT AATTTTAATAAAAATAATTAGTTGATCGTTTACATTAAAAATACTTTTATATGTGTGAAGGAAATTTAAGATTGGGATTG AATAAAATAATAAAATATGAAAGTCTATGGACAGAAATAATAGATGGTATTTAAATTTCAATTAGGGGGGCATGTTGACT AATTTTTCTAGAGCTACTGGTACCCTTAGAGAAGCAAAAGGTACTGAAGAATCCTCCAAATTAGGAACTTTTATTTTCTA TTTCATGTTATTATGAAAACCAGCTTTGGCAAATAGGAGAAATTAAACCCCTTTTCTGATAACCTAAAAGTGTTTCTGTA TCTAGGTTTCATTAGCACAAATGGAATACCAACTTCCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGA GGAAAGGTCAAGGGTATGGGTGAAAAACAAATTGAAGTGGACAAACGTATTTTGCGTAACCAAGTAAGTAAATAGTCTCA TACAATTATTGTTGAAGTTATCAGCTTCTCTGTGAAAATCAATGGCATTTGATTGGATAAGTGTGCCATATACTAGTGCC CTATTATCAAATCGACACATTGTATATCTGTTACTAACCAAACTGTTATACACATTATGCATTTCTGTAGAAGTTTTCTG TTATTTCTGTTTTACTTTGGGAATCTTAGTTCCTCTAAGAAATATCTAATGCCTGGGCTCTGACAGATTGGTGTTCTCAA GAAAGAACTAGAATCCGTCAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTTTCAATTCCTGTGCCAGTGGTATCCT TGGTTAGTTTACAATTATATTGACGCTATTTTTTATTAGGCTGATATTGCCTTTGCATCTTAACATATATGGTAATGTTT GCCATATAAACGATCTTTCTGTTGTATTGTTTTTTTTTTGGTTTGATAATGAGATATGCTTACTTGACAACGTTGTAGGT TGGTTACACAAATGCTGGTAAGAGTACGCTTTTGAATCAATTAACTGGAGCAGATGTTCTTGCCGAGGATAAATTATTTG CAACTTTAGATCCAACTACGAGGAGGGTACAGGTCAGTCAAAATTTACCTGGAGGATTTCCCATTTTTATTCACAAACTA TTCATTGTCTTTATTTTATTCACAAACTTATTCGTAATGAGACTCAGATCTCATCTTCATTTTTTATATTTTTTTTATGA ATAAAGAACTAGCCCAAGACCTTAAAATCGGCCTTTGCCTTGCAGCATAATCATTTCCTATGTTTACAGTGTAGTGTGGC TGTGGGATGGATACAACTCTTGGTTGTTTTTATTTTTTTAGAGTTAGTATGCAGGAAAATGAGTCTTGTGCAGCCAGTTT AGGTTATAGTTACTTTAACATGATGCGCTTTGTTCATTTGTTGTGATCCAGATGAAGAATGGAAAGGAGTTTCTCCTAAC AGACACTGTTGGTTTTATTCAGAAGTTGCCTACAACACTAGTAAGAAAGATAGCTGTATTGCGATTAATGATGCTTTCGA TGTTTGATGAAAATTATGCTATTGATAGTTTGAGTTATTTCTTTATTTTCTATCAAATTAACAAGTTGCTATGAAGCTTA GGCCCAAACTTTGAAATAATGACCAAACAGTATTATCATTTTTCTGCTTTCTGTAGGTTGCTGCCTTCAGAGCTACGCTG GAGGAGATATCAGAGTCATCACTTTTGGTGCATGTGGTTGATATCAGGTTATATATCAGTAGAACTACTGGGATGAACTT TATCTTCGGAGAAAAGGAATTTTGCACGACTAGTGGTTGACCTACAACATATCTCATTAATTATTTGTAACTTTGCAGTC ACCCCCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTTCTCTCAGAACTAGATGTATCACCAATTCCAAGATTGATG GTCTGGAACAAGGTATTGGAGAATAGTTTTATTGGTTTCTCTATTCTTAAATAGTATATTGAGTTAGCCATCTTCCTTTA TATTGTTAATTTGTATAGATATTAATACCCTTGGATTGGACCTAGAGGATATATTGATATTTAATAGATACCCTATCATT TAAGATTGGAATCATTAGATATTGGGACTTAACCAAAATGCTTTAAAATCAATTCCAGGGTTATAGACTGCTTTTGGATC AAAATTGGTTCTCTTTATTATCATTTACTTGATTATCAGTTTCTCAAAGGAATTAATTTCTTCTGTTAGAATTGACTCAA ACTATGATGTTGATTCTATTTCTTTTTATGTTAGTCACTCTGTTTGTTGATTCTTAATTTTTTCTCCTCCATCAAAAAAC TTTATAGCAATTGAACATTCTGGTATATCTTCTTATGGGGCAGGTTGATAAGGCTAGTGATCCTCAGAAAATCAGACTTG ATGCTGAAAAAAGAGAAGATGTTATATGCATATCTGCTCTAACTGGCGAAGGGTTACAAGAATTCTGTAATGCAGTTCAA GACAAACTAAAGGTACAAAGTTGAAGCCAACCTTAAACATATTTTAAAATACACCTTTTTATTTTTTTTATAGCATGTAG TCCATTTGTTAGAGGGCGATCCTCGGTGCAACGGTAAGGTTGCCGCCATGTGACTTTGCGGTCATAGGTTCGAGCCGTGA AATCAGGCTCTTGCGAAATGCAAGGTAAGACGGCTTACATTAGATCCACTAAGTGGATCCAGCCGCTCCCTGGACCTCGC GCATACCGGGAGCTTTATAGCACCGGTTTGCCCTTTATGTAGTCCATTTGTTAGAACTACTCACATTTGCTAATCAAAAT TTTATTATTCTTTAGGACTCCATGGTATGGGTAGAGGCTTTGTTACCATTTGAAAATGGGGACCTTCTCAGCACCATACA CCAGGTTGGAATGGTTGAGAAAACTGTAAGTAGATACCCACCCTTCCTTGCCCATGAATCAATTACCACCGTTGATCAAA ATCTGGAACTAGAATTTAATTTTTCTTTTAAATTAGCAGATTCCACATTGCTTATCAGATCATGGTTTTCCTAATTGTTA TTGTCAAACTTGCTGACCTTTAACTTTTGATTCATATATAGGAATATACAGAGCAAGGGACATATATCAAAGCTCATGTG CCCCTACGTTTTGCAAGATTGCTTACACCCATGAGGCAAATGTGTGTATCACGACCTTAACATAAGCATATAAATTTTAT GTTACACTTCCATAATTATTTGCCATTAGGTAATGTAGAAAATGTAATATAGTTTTGCATCATTTATGTTTGAAGTCATG GGTGAGGGAAACGAGAAATAGTAGCTTGCAGCATAACATGTCTCATAAAGTTGTACATATATGTATGTATGTAACCATTG GAGTCATTCTCAAGCCCTTGAAAATGGAGACTCTATTGAAGGATGGCAATGCGACTGCAGTTTGCCATAACATATCTTTG CTTTGTCTTTATACAATATTTAGTTATTAACACCATAATCTGTGAAATTGCTAAGATATTAGCATTTTATCACATTCAAA TAGAAAACTCAATACTTATCAGCAATAATCCATGAAAGGCGATCTGGTGTGGTTTAATTCTTCTAGGAGACTATTTATTA TATATGAATCAGATAAATTTCACACACTTATGTGAAAAAAAAGGGGGAAACTATATTTACAAATTTACAAATTAAAAAAT AAAAGGATATTCTACTATCACCTTGGCCTTATTTTCAAAGAGACGGTAGAAGATAGCAACTGGATAAATATAAAGCCATT AGATGGTAACAGTTTTGATAATGTGCAAATATTTGCAAGAGGATTAAGAGTGTGCTTGGATAAACAATTTAATTAAG
CDS sequence (LotjaGi5g1v0011800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTTATGCCCGTACGGTTCCGTCATTCAACCACCGCCACTAACTCAACAACAACAACACCGCCACTATCCAATCCC TCTTCTTCGCCATCCTTTACTATGCCGCTCAACCCCTCTCTTTCTCACTCCCAATCACACCCTCATCTCCTCCACCACAA CCACCACCACCTCCGTTCTGCACCGCGACCTCGGAGCTGAACTCGCCGCCCCTGACTCCAACGACGCCGTTTCAAACCCC GCAACTGAGTTGCTGGACGCACCACCGCAGCAGCAAAATGAAGAAGAAGAACCAGCTCCGCAACCGCAAGTAACGAGGTT CAGAAAGAAGAAAGAAGAACAGCAAGACAACGGAGACACCTTCGATAACCGTTACAAGCTCCGTAATGGAAGGGAGGTTT TGGAAGAGAAAGCGTACCTTGTCGGCGTTGAGTGGAAGGGTGATGATGTTGAGGACTCTTTTGGTGTGCAAGAATCTCTG AGTGAATTGGCACAGTTAGCTGACACTGCTGGATTGTTGGTTGTTGGCTCTACTCACCAGAAGCTTGCTTCTCCAAACCC TAGGACGTACATTGGCTCCGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGGGTTGGATGTTGAAACTGTAATCTTTG ATGATGAGTTGTCAGCTGGGCAATTGCGCAACTTGGAAAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCT CTTATCCTTGATATATTCAATCAGCGAGCAGCCACACATGAAGCATCTTTACAGGTTTCATTAGCACAAATGGAATACCA ACTTCCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTCAAGGGTATGGGTGAAAAACAAA TTGAAGTGGACAAACGTATTTTGCGTAACCAAATTGGTGTTCTCAAGAAAGAACTAGAATCCGTCAGGAAACATCGAAAG CAGTACCGTAACAGGCGTTTTTCAATTCCTGTGCCAGTGGTATCCTTGGTTGGTTACACAAATGCTGGTAAGAGTACGCT TTTGAATCAATTAACTGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCAACTACGAGGAGGGTAC AGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTGCCTACAACACTAGTTGCTGCC TTCAGAGCTACGCTGGAGGAGATATCAGAGTCATCACTTTTGGTGCATGTGGTTGATATCAGTCACCCCCTGGCTGAGCA ACAGATAAATGCTGTGGACAAAGTTCTCTCAGAACTAGATGTATCACCAATTCCAAGATTGATGGTCTGGAACAAGGTTG ATAAGGCTAGTGATCCTCAGAAAATCAGACTTGATGCTGAAAAAAGAGAAGATGTTATATGCATATCTGCTCTAACTGGC GAAGGGTTACAAGAATTCTGTAATGCAGTTCAAGACAAACTAAAGGACTCCATGGTATGGGTAGAGGCTTTGTTACCATT TGAAAATGGGGACCTTCTCAGCACCATACACCAGGTTGGAATGGTTGAGAAAACTGAATATACAGAGCAAGGGACATATA TCAAAGCTCATGTGCCCCTACGTTTTGCAAGATTGCTTACACCCATGAGGCAAATGTGTGTATCACGACCTTAA
Protein sequence (LotjaGi5g1v0011800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLCPYGSVIQPPPLTQQQQHRHYPIPLLRHPLLCRSTPLFLTPNHTLISSTTTTTTSVLHRDLGAELAAPDSNDAVSNP ATELLDAPPQQQNEEEEPAPQPQVTRFRKKKEEQQDNGDTFDNRYKLRNGREVLEEKAYLVGVEWKGDDVEDSFGVQESL SELAQLADTAGLLVVGSTHQKLASPNPRTYIGSGKVSEIKSAIHGLDVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTA LILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGVLKKELESVRKHRK QYRNRRFSIPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAA FRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSPIPRLMVWNKVDKASDPQKIRLDAEKREDVICISALTG EGLQEFCNAVQDKLKDSMVWVEALLPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQMCVSRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 70 | 124 | 55 | - | – | |
| MobiDBLite | 75 | 99 | 25 | - | – | |
| MobiDBLite | 101 | 124 | 24 | - | – | |
| PANTHER | 104 | 551 | 448 | 5.1E-191 | ||
| PANTHER | 104 | 551 | 448 | 5.1E-191 | – | |
| TIGRFAM | 138 | 493 | 356 | 6.5E-135 | ||
| Gene3D | 150 | 274 | 125 | 2.8E-42 | ||
| Pfam | 158 | 246 | 89 | 1.4E-30 | ||
| Hamap | 160 | 523 | 364 | 47.007 | ||
| Pfam | 249 | 326 | 78 | 1.2E-26 | ||
| CDD | 291 | 494 | 204 | 5.82583E-112 | ||
| Coils | 305 | 325 | 21 | - | – | |
| Gene3D | 331 | 499 | 169 | 6.5E-43 | – | |
| ProSiteProfiles | 332 | 498 | 167 | 68.681 | ||
| SUPERFAMILY | 332 | 505 | 174 | 1.05E-42 | ||
| TIGRFAM | 333 | 489 | 157 | 1.3E-13 | ||
| Pfam | 334 | 452 | 119 | 8.8E-21 | ||
| PRINTS | 334 | 354 | 21 | 1.3E-7 | ||
| PRINTS | 401 | 419 | 19 | 1.3E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi5g1v0011800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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