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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0034800 |
| Transcript ID | LotjaGi5g1v0034800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT3G25230.1 rotamase FKBP 1; Swiss-Prot: sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62; TrEMBL-Plants: tr|G7IBB7|G7IBB7_MEDTR Peptidylprolyl isomerase; Found in the gene: LotjaGi5g1v0034800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:5757986..5764520) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAAGCCATTGTAGTAACATTTGTAAAAAACATTTTAGAAGCAAGGTGCAGCCATGGTGGTGTTGTCAGAGATTGAGG AAGATGAACTTGACGAAGAACCAGGCGAGGTCATTGAATCCGCACCGCCCCAAAAGCTTGGCGAAGAGAGGAAACTCAGT GGCGACCCGCCTCTCACAAAGAAGCTCCTCAAACGCGGACACGGTTGGGAAACCCCTGACATCAACGACCAAGTCACTGG TTAGTCTCACTCTCACTCATCATCGCTCAAAAATCTATGGTTATCATTATTCATTACCACTACACAATGCTCCTTTTGAA ATGCAGTTCACTATGTTGGAACTTTCCTTGATGGAACAAAGTTTGTCTCCACTAGAGATTCTGATAAGCCTGAGACATTT ACTCTTGGCCAAGGTGGAAAAAATAGCTTAATTTGTTTTAATTTTGAAGAAAGTCTTGTTTTTTATTATAATTTTCATGT GGGGTGTTGTTTAGTATTGATTATTTGTTGATGGGGTTGAATTGTTTGATAGTTCATGTGCATGCTGTGTTGGATCATGG GATTATCACAATGAAGAAGGGAGAGGTAGCTTTGTTCGCGGTGCCTGATGATGGCTCAACCTCGGTTATGCAGTTTGAGT TGGAACTCATTTCGTGGATCAAGGTGGTGGATGTTTTCAAAGATGGTGGGATCATCAAGAAAATTATGGAGGCGGGGAGC GGGAACGAGCGGCCTAGTGATCTGGATGAAGTCCTTGGTATTCTAATTTTTTTGCTTCCAAACAGTTGAACTTGACATTT GACAACAAGTTGAGAGTTATATTTCCATTTCATGTTTATGCTTTTGCTGTATCTGTTTTGGTCTGTTTTAAAATTTAAGA TTGCTGCTGCAGTGAAGTATCATGTGGCGCTAGTTGATGGCACTGTTGTTGCAAAAACACAAGAAGAAGGGGTTGAATTT CATTTGAAGGATGGTATTTTTTTTATACTTGTACTCTTATTTTAGTTCCCTGAATAGGATATATAATTTCATTTTCCATC TCAGTCTGTGTGACCAATTATGCTACTGCTTGAAGGTCATCTTTTACCAAGATTGCCGAAAGTAATCATGACTATGACAA GGGGAGAGAAGGCTGAATTAATTGTTCAACCTCAATGTACGTTTAATTTTCTTCTACTCCATAATGTTTGTGTTTTATTA CCTTTCTAGTAACCTAATAAAAGGTTCACTATATGTCCTTATGTTCTCAAAATATGAACTATCTTTGCGGTCGGTTGAAA TGTTTCTGCTTTCTTCTAGTCAGTTTGTTTTACTAGTGCTTTAACTACTAGACCTTAATTGGCCTTGATAAATTGATTGA TCTATGAAACTGCAAATATTGATGTTTTTGCATTAATCATGAAAGCCATTTCAATGCTAAGCCTGCTTTTGGCATAACTC TATTCTATAAGTTATCTTCAATCCCCACCGGAATCTCAGTAATTCATACTTCTTTCAAATTCTTCTTGTTTATAAGTTAC ACAATATCTGGATGCTAAGCCTGGAATTTTAGTTTTCTTCCTTAGCTTCAGGAATCTTGCGTTCCAGTATCGCATAATTA TTTTAGAATTCTATTGCATATGGTGACTGCAGATGCCTTTGGGGAGAAAGGTAGAGAAGCTGGCAATGGGATCCATTCAA TTCCCCCAAATTCAGTGCTGTGTGTTAATATTGAATTGGTATCCTTCAAGCCCGTCATAAATGTTACTGGTGACTCCATG GTGCTTAAGAAGATTCTGAAAGAAGGGGAAGGTGCTTTCATGGCCAATGAGGGTGCAAATGTTACTGGTGAGAAAATAAC CATTTCATTCAGTTGATTTGAAGCAGAATGGATCTAGAGTTATAAGGATTATTGTCATATAATGTGATAGGAAATTTTGA ACATATCGCTGTGCTTCAATTTTCTTTGACTAAATGATTACTGAATATTTTCAGATTGCAATTTTTCAAATCATATCTGG TATCTCCCTCAGTGTTGCATTATCATCGTATAAGAAACGTTGAATCTCTTAAACTATGTTGTTATTAAATGTGAAGTTAA AATTGAAATAAACTAATTTACTGATCATTCTGATGAATCAATAATTCAGTTCATATATCTTCTACACCGAAATTGGTTGA GTTGTGGTTAGTTTCAAGTTAATCATTCTCAAATCTAGTGTCACTTCAAGTTGTAGGAGACAAGGACTAGGAGTGTAAGT TCATTTGCCCCAAATTATCTGCCAATTCATTTTTCAAACTCCCTTTAACTTCCAATCATCACTAATTGTAAAAAATGAAG GAAATGTTTTTTTTAATGTATTAACTTTTGCATTTAAACATGCCCACTCAAGCCACACACAAATTAAATAGAAGATGCTT GTAATATGTTTGTCATTTTTTTGTTGGAATGGTTTGCTGTGAAAGCAGTCCTATTATAATTTTATGAGTATGTAAAATTT GTTATTTCTCTCGAACTAAGAAGATAATACAGCTATGATTTTATTAATTGCACAAAAACAAGTGAAAGAGGAAAAGGAAG AAGCCTCATTTTGTCATTTTACTAATTGGTTTTGTTAAAATTGCTATGGCAGTCAGCTACACAGCTATGCTAGAAGATGG CACTGTGTTTGAGAAAAGAGGAATTGATGACATAGAACCCTTGAAATTCATAACTGATGAGGGTGAGTTTATGGTTTTTA TATCTTAACTACACTCCTTTGCATGCTTTTTCATCCCTTGTTGCGTGACATCTAGGAAGTGATGATACTAATGTTTTTAT TTTTCTGTCTTTACTTTGTAGAGCAAGTGATTACTGGTCTAGACCGGGAAGTGGCAACAATGAAGAAGGGAGAGAGGGCC ATGATTAGCATACATCCTGATTATGCATTTGGAAATATGGAAGTCAGACAAGATTTTGCTACTGTGCCTCCAGGCTCAAA TGTAGTGTATGACATTGAGATGATGGATTTTATTAAGGTAAAAAGAAGAAGAAAAAAAAAATCCTCTGCCTTTCCCCTAT AGACTAGGGTGGAAACTACAGATTAGAGAAAAACAAAGTGACTTGCAGTATTCTTTAGTTTCTCTTGTGATGTATAGTTT ATCATTATATACATATATTTATTTGTATACATTTGTGTTTTTGATAGTTCTAACCTTTATTTGATTCAAAGGAGAAAGCA CCATGGGAATTGAGTAGTAAGGAGAAAATTGCGGTAGCCGGGAGAAAAAAAGATGAAGGAAATTTACTATTCAAAGATGG AAAGTATCAGCGAGCAGGGAAGAAGTATGAAAAGGTGAATTATCTTGCAATGGCTCTGATTTGTCAAGTTTCATTAAGAT TTTTCTAGTTTGTGATTCCGTGAGTGATACCTTGTACTTTCCCAGGCGGCTGATTTTGTTAGTGAAGATGGATCCTTTGG CGATGATGAGCAAAATCTAGCTAAGGCATTGAGAGTGTCGTGCTGGTTGAACGGTGCAGCTTGTAGCCTTAAACTTAATG ACTTTCCTGAAGCAATCAAACTATGTTCTCAGGTAACAGCCAGTCATGTATAAGTTTTGAAGCAGTCAATTCTTTGAGTG GATTAGCTAATTGAGAAACCAAATGTGGGTGTGAAAAGTGATATGAAGTTGTATGCTTTAGGTAAAAACTAGTTGTGAGG TAAAGTAAAATAAACTAGTTCTCATAATAGCCCTAGTTTGCTATTTCAAGAATAAGTTCTCTGAATCATAAACTGAGTTA CTTGAAATAACTATCTAGTGTTGCCCATGGTCTCGAGAGACCCGATTTATAACATCTTGATAGAAACCCTTGCAGAGATT GCTGAAAGATGAGAATTAACTCGAGATTTCAGAAGCTGAAATAAGAAACAAGCAGAAATGTAGCATCACGGTAGCTAGGC TAGCTCTTCAAGGGGATGGCTTTTCTCGTCACTCTTCCTCTTCCTTGCTGCCATGTATCTACTGAGTTACAATAAAATCC TCTTTTCATATTCCCCTTTTTCCTCATCAGGGTACTACCTTCTCCTTATTTCTCCTCACATAGGCCCCTGTACTAACAGT AAGGTATCTAGAACAAAGCTGTTTCATGAGCTGATGGTGCATAAGTGACTAGAAATTTACTGGTTTATGAGGGCTTCAAA ACTGGCTGTGTTGTGATTGTTCTTTCCGTATTATAACACCAATATGTTAGCATTGTTATCTGCTGAAAAATACTAAATTT CTTGCAAGTAATGGCAATGCCTACATGTAACTACCACAACATGGGTGTTGAAAACTATTAAGATCCCACATCAAGTAGAG ATATGGCCAAAGTGCTCCTTATGAAGGCTTGGCAATCCTCACTTCTTGAGTTAGCTTTTAGGGTGAGTTAGGTTTGGTAT GAAAACCTATACTAGATTTGGTATTGGGGCCACAATAGGTGTCCAAGAATCTACTTGGCCTTGTGACTATCCCAGATAAA TCAGTCCTACCTCCTAGAAAAATCATTCCTATAAACTTCACAGTCTAAATGTTCAGTTTTGGGCGAGAGGGGGTGTTAAG ATCTCATATCGATTGAAGATGTGGCCAAATTGCTCCTTATAAAGGCTTAGGAAATCCTCATCACTTGACCTAGCTTTTGG AGGCCGATTAGGCCCTAAATCCAAGATAAACTATTAGACTGGCATATACAACTCCTGGTAAGCTTGAAAAACAGTTAAGT AGTTCAATACTGGAAGCTTCACGTATAGTGATGCATGCCCCTTACTGAAAACAAGGAAAAGATGGATTAATATCATCTCA TCACTCAACTTATAACATGGAAGCTAAGTTATAAGAGTAGCTACCATATTACACTTCTCATTCTTTTTGGCGGGTTAGAA GTTTAACCTCCATATCACGTTTCTTCTCTTTTCATCAGGTGCTTGATGTTGAGTTTCACAATGTGAAAGCTTTGTACAGA CGAGCGCAAGCATATCTAGAGACTGGAGACTTTCTCTTGGCAGATTTGGACCTGAAGAAAGCTCTTGAGGTGGACCCACA AAACAGGTAACTAGAGTATTGATTTTCTTAAGAAAATTACTGATGGATAGAAATGGAAGTTTCTCACTACGGGAAGTTTG TTTTTCATTTTCCAGGGATGTACTGGTAATGAAGAAGAAATTCAAGCAAATTCAAGCTGACAGTGACAAGAAAGACGCTA AGTTGTATGAAAATATGTTTGCACATAAAATAAAGGTGTGATTAATGTTTAGACTTAATAACTCTTTTTTGCACGTGTAT TCAAAATTAAGAATTTGTCTTGCATTAAATCCCACTTGCTGAATCTTTGGGTAAGATTGAGTGCAGGTAGGGTTAAAATA ATTGGTAATTTTAGGTAAGGACCTAACCCACGGTGATATAATAACAGGGTTTGGCTTAAGTTCACTCTTCTTTATCTAGT AGAGGGTGTTGTGTAGATTTAGGAAGTTGTCTTGCTTTTGTATTCACTTGTGAATCTCATGATTCCTCGTGGATCTATGA CGCTAACCTGGGTGCTATAGAAGCATGGGATTTTCTAGTGTATGTTGATGCCTTGGTCAGGCAATGGATAATCAAATGTT TCAACATTTCACATGTTTTTCTCATTTTCATTTTGTTGCTCTTAATCTCTGTTGATTGTCCTGCTTCTACATAAACTATA TTTGTAACTAAAGCTCTTACTCTTTTCTGGCAGAAATTAAAGGTTGAAAAGGTGGAGCATAAGAAGGAAAGCGAAGAGGT TGTGAGAATGGAAATGGACAAAGTTGATGATAACGCAGCTCCTCCTGATGGTGTGGTTTAGTTGTTGATTCTTGTTGACC CTGTAAAGTAAAAGTATACAATATAAAGCCTCTAAGTCTCTAACGGAAGAATATAATATGAAGTTATAGATGGTAGATGA TGTGCCAAAGGTGCAAGTGCACAGTTTCGCATGGGGTTTTAGTTTATCGAACCTCAGCGATTGTGATAGTTTTACTCTAT CGTGACCAATTTTACTTTGTGAGGATGAAAAACAAAAATAAAAGGGAAAAATATTGGATTGGTGGTTGTAACTTAGAAAT TAATAAAACCGAAACGAGAGCAAGATTATAATTGAAATAAATTCAAGTTCAAAACGCACTGATGGTATGATTTCATTAAC CCTCCTACGTATTTTCTCCAATTTAGTTATAATTAAGGATTCAATTAACTGTTCAAGGTGCTTAGACTAGATGTCTACTT ACCAATTTCTCGCCTAAGTGTGCCTTCTAATTAATTAGTTATAGTTAATTCCTTAGTATGTAATTCTAGTTAATTAGAGA TTAATCACATTCAATTCAGGTAAACACTAGCAATTCACTACCTTTATTCTTAAGGTGTACAAACCATTTGCTCAACTTCT CCTCAGTTTCTTAGATTCTACCAATTTCTCAATTGAATCGAACGTAGCAAAGTAATCTTAGCGTAACAGATTGAATTAAA ATAGACAAGAAGTTCAAGAATACCAAAGAAATCTTAATTATAACTTAGAATTCAG
CDS sequence (LotjaGi5g1v0034800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGTGTTGTCAGAGATTGAGGAAGATGAACTTGACGAAGAACCAGGCGAGGTCATTGAATCCGCACCGCCCCAAAA GCTTGGCGAAGAGAGGAAACTCAGTGGCGACCCGCCTCTCACAAAGAAGCTCCTCAAACGCGGACACGGTTGGGAAACCC CTGACATCAACGACCAAGTCACTGTTCACTATGTTGGAACTTTCCTTGATGGAACAAAGTTTGTCTCCACTAGAGATTCT GATAAGCCTGAGACATTTACTCTTGGCCAAGTTCATGTGCATGCTGTGTTGGATCATGGGATTATCACAATGAAGAAGGG AGAGGTAGCTTTGTTCGCGGTGCCTGATGATGGCTCAACCTCGGTTATGCAGTTTGAGTTGGAACTCATTTCGTGGATCA AGGTGGTGGATGTTTTCAAAGATGGTGGGATCATCAAGAAAATTATGGAGGCGGGGAGCGGGAACGAGCGGCCTAGTGAT CTGGATGAAGTCCTTGTGAAGTATCATGTGGCGCTAGTTGATGGCACTGTTGTTGCAAAAACACAAGAAGAAGGGGTTGA ATTTCATTTGAAGGATGGTCATCTTTTACCAAGATTGCCGAAAGTAATCATGACTATGACAAGGGGAGAGAAGGCTGAAT TAATTGTTCAACCTCAATATGCCTTTGGGGAGAAAGGTAGAGAAGCTGGCAATGGGATCCATTCAATTCCCCCAAATTCA GTGCTGTGTGTTAATATTGAATTGGTATCCTTCAAGCCCGTCATAAATGTTACTGGTGACTCCATGGTGCTTAAGAAGAT TCTGAAAGAAGGGGAAGGTGCTTTCATGGCCAATGAGGGTGCAAATGTTACTGTCAGCTACACAGCTATGCTAGAAGATG GCACTGTGTTTGAGAAAAGAGGAATTGATGACATAGAACCCTTGAAATTCATAACTGATGAGGAGCAAGTGATTACTGGT CTAGACCGGGAAGTGGCAACAATGAAGAAGGGAGAGAGGGCCATGATTAGCATACATCCTGATTATGCATTTGGAAATAT GGAAGTCAGACAAGATTTTGCTACTGTGCCTCCAGGCTCAAATGTAGTGTATGACATTGAGATGATGGATTTTATTAAGG AGAAAGCACCATGGGAATTGAGTAGTAAGGAGAAAATTGCGGTAGCCGGGAGAAAAAAAGATGAAGGAAATTTACTATTC AAAGATGGAAAGTATCAGCGAGCAGGGAAGAAGTATGAAAAGGCGGCTGATTTTGTTAGTGAAGATGGATCCTTTGGCGA TGATGAGCAAAATCTAGCTAAGGCATTGAGAGTGTCGTGCTGGTTGAACGGTGCAGCTTGTAGCCTTAAACTTAATGACT TTCCTGAAGCAATCAAACTATGTTCTCAGGTGCTTGATGTTGAGTTTCACAATGTGAAAGCTTTGTACAGACGAGCGCAA GCATATCTAGAGACTGGAGACTTTCTCTTGGCAGATTTGGACCTGAAGAAAGCTCTTGAGGTGGACCCACAAAACAGGGA TGTACTGGTAATGAAGAAGAAATTCAAGCAAATTCAAGCTGACAGTGACAAGAAAGACGCTAAGTTGTATGAAAATATGT TTGCACATAAAATAAAGAAATTAAAGGTTGAAAAGGTGGAGCATAAGAAGGAAAGCGAAGAGGTTGTGAGAATGGAAATG GACAAAGTTGATGATAACGCAGCTCCTCCTGATGGTGTGGTTTAG
Protein sequence (LotjaGi5g1v0034800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVLSEIEEDELDEEPGEVIESAPPQKLGEERKLSGDPPLTKKLLKRGHGWETPDINDQVTVHYVGTFLDGTKFVSTRDS DKPETFTLGQVHVHAVLDHGIITMKKGEVALFAVPDDGSTSVMQFELELISWIKVVDVFKDGGIIKKIMEAGSGNERPSD LDEVLVKYHVALVDGTVVAKTQEEGVEFHLKDGHLLPRLPKVIMTMTRGEKAELIVQPQYAFGEKGREAGNGIHSIPPNS VLCVNIELVSFKPVINVTGDSMVLKKILKEGEGAFMANEGANVTVSYTAMLEDGTVFEKRGIDDIEPLKFITDEEQVITG LDREVATMKKGERAMISIHPDYAFGNMEVRQDFATVPPGSNVVYDIEMMDFIKEKAPWELSSKEKIAVAGRKKDEGNLLF KDGKYQRAGKKYEKAADFVSEDGSFGDDEQNLAKALRVSCWLNGAACSLKLNDFPEAIKLCSQVLDVEFHNVKALYRRAQ AYLETGDFLLADLDLKKALEVDPQNRDVLVMKKKFKQIQADSDKKDAKLYENMFAHKIKKLKVEKVEHKKESEEVVRMEM DKVDDNAAPPDGVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| MobiDBLite | 1 | 18 | 18 | - | – | |
| PANTHER | 16 | 538 | 523 | 2.5E-174 | – | |
| PANTHER | 16 | 538 | 523 | 2.5E-174 | – | |
| MobiDBLite | 25 | 39 | 15 | - | – | |
| Gene3D | 34 | 135 | 102 | 5.4E-21 | – | |
| SUPERFAMILY | 36 | 132 | 97 | 1.89E-20 | – | |
| Pfam | 53 | 115 | 63 | 1.1E-11 | ||
| ProSiteProfiles | 57 | 117 | 61 | 13.335 | ||
| Gene3D | 136 | 252 | 117 | 1.3E-28 | – | |
| SUPERFAMILY | 137 | 252 | 116 | 9.62E-24 | – | |
| Pfam | 156 | 249 | 94 | 1.3E-14 | ||
| ProSiteProfiles | 161 | 252 | 92 | 18.034 | ||
| Gene3D | 253 | 377 | 125 | 8.7E-32 | – | |
| SUPERFAMILY | 258 | 388 | 131 | 2.16E-30 | – | |
| Pfam | 277 | 368 | 92 | 3.1E-19 | ||
| ProSiteProfiles | 280 | 372 | 93 | 21.0 | ||
| Gene3D | 381 | 545 | 165 | 4.3E-45 | ||
| ProSiteProfiles | 389 | 422 | 34 | 6.284 | ||
| SMART | 389 | 422 | 34 | 170.0 | ||
| ProSiteProfiles | 389 | 422 | 34 | 6.599 | ||
| SUPERFAMILY | 391 | 534 | 144 | 3.35E-25 | ||
| ProSiteProfiles | 438 | 505 | 68 | 14.684 | ||
| SMART | 438 | 471 | 34 | 14.0 | ||
| ProSiteProfiles | 438 | 471 | 34 | 5.782 | ||
| SMART | 472 | 505 | 34 | 3.1E-4 | ||
| ProSiteProfiles | 472 | 505 | 34 | 10.148 | ||
| MobiDBLite | 554 | 574 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0034800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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