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LotjaGi5g1v0048400.2

Overview

Field Value
Gene ID LotjaGi5g1v0048400
Transcript ID LotjaGi5g1v0048400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|I1M9C6|I1M9C6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0048400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:8117344..8120305) extracted from Lotus japonicus Gifu genome v1.2.

CTAGATGACTACTAAAAGGGTTACATGGAAGTCTATGAACTTGATCCTGAGCTGTTACAAGACTAAGTTCCCATTGGAGG ATTCTGAGAAACGGGTTTTGAAACAAGGATCATTCCAGAGGTTGTGTCTATCTGATGTAAGCAACTCAAGCTCTACTCAA GCCATTGAAGATCTTTCAGTTTCATTTGGTGGTTCAAAACTTTATGCATTCACACTTGAGGAGCTGAGAGAGGCAACAAG AAATTTCTCATGGAGTAACATGCTTGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGCTTTTTTGATGACAGACTCAGGC CTGGTTTGAAGGCTCAGACAGTGGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGTTAGC TTTCTGAAGTGCCCTTTATAGCTTCTTAATAACATGTTTCGATGAGCTTATTTACGCTCAGAATCAATTCTGTCACCGAG AAGCTACTCATAGAAGTTTCTCGGCACAATTGATTCTGTCTTTAGAGCTCATTAATAGCATGTTTTGATCAGCTTATTTG TGCTCAAAATCAATTCTGGTGCAGAGAAGCTTCTCCCCAAAATTGATTATGGGTTTAGACTCAACTTTAGATAGATTTCT AAACATGCTGTAAGAATAGTGCCCCCACTCTATTTCTTTGCTAGTCACAAATAAATACTAATGAATGAAAATCTCAGAAG AATTAATGGAACACTAGTGTCTAACTCTTTTAAAAAATTTTGTTGGAATTTTGTTTTTTAGGCAGAGATTATATTTCTTG GACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAAAACAGGCTATTGGTGTATGAATAC ATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGTATGTTGCTTTTCTATCTCTCTGCTTACCCTACTCCTTTTTC TCAAGCTTTCCCAAAATAAATATGAATAAATTGAGTTAAAGTCGGTTCATATTTAGAAATCTTTTTACAATTGATTCTAA AGTCAGAACCAATTCTTGATAGAAGCTTCACACAGCTTTCGAGTTTCAGAATTGATTTTGAGAAAAGAGAAGTTCATCCA ATCATGCTATCACTATATATTTACATAAAGCCCCAAGGTTATCTTTTTATGAATTTCTTACCATAATGATTATCATTAGG TATCTAGTTATATATGATGATCAAATGATTTGGATCTTCTCTTCTATATTACCAAGCACACCTAAATACCAAGTTATTTC AAATCTTTTGATTAGTTTTATTTGGACTCTGATGTGAAACCCTATTACTAGTACAAGAATTTGGATTCTTACCATAAACC AAGCCTTATGGATGCTTCTTTTGCTCTGTCACAAGCAGAATACTCTGCTGCCATGCCATGGTCTACAAGGATGAAAGTTG CATTAGGTGCTGCTAAGGGGCTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATCTACAGGGATTTCAAAGCTTCAAAC ATCTTGCTAGACTCAGTAAGTTCTTTCTTCTCTGCTCTCTTGATTTCTTATCATCTGTTAGAGGATCATCTTGCTTCTCC TACATCATCTTCGCCTTCGCCGTATCAAGAAATTAACTCAGACTCTTTTAATTTCTGAGTCCAGGACTATACAGCTAAAC TCTCAGACTTTGGTCTTGCTAAGGATGGCCCTGATGGGGAAGAAACACATGTAACAACGCGCATCATGGGAACACATGGC TATGCCGCTCCTGAGTACATCATGACAGGTATATGAAAACTACCATCAATGATATGAATCAGGCTTTTAGTATGATGACA CATAAAAATTAAGAAGGGGAAAAGAGATTTCCATTCCAAGGGTCTGTTAGAAATCTTAAGAAGAACTATAGTATTACAAT TCCTAGCATATGGAATTATGGATCTTTAAAAAGTAAAATAGGGGAAAGGAGACTATTCCATTCCAAGAGTATGTTAGAAG CCTCCACAATAACTAATAGCCATATCAACCATGTGCATGTTTGAAAACCCTTCTTCCAATTGATTCTGAAGCCAGAATCA CTTCTGTTAGTAGCTTTTGAATTTCAGAATTGATTCAGATAAAAGAGAAATTGATGCAAACATGCGATTAAGTTCCTAGA ATGATGGATCCTTAAAAAGTAAAATAGGAGAAAGGAGCTATTCCAGTCAAGAGTATACTATGTTACAACTTACAAGCCCT CAAAAGAACTAATAATAGTAAGCTCCCCAACCAAAGAAGCTTATTTGCAGTGTAAAGACAACTTTGACCTTCAAGTGAAA AGCATGAATTCTTACACTACCTTTCAATCTATTAACTCCCCCTTATTTTGTCACTTCCTTAATTTCTGAGATCAAATAGG AAACAAAACCTTCTTCACAACCCAATGATATATTTCTTACAATCATGTTTAAAAATTCTTCCACAATTGATTCTGAAACC AAAATCAATTCTGGAGAGAAGCTCCTATGAGTAGAATCTGGGTGCCATAATTGGTTTTGAGGAGTTGATTGAATCATGTA TTTGAAGCTAACTCTTGCTTGATTATAGGTCACCTTACAACCAAGAGTGATGTGTACAGCTATGGAGTTGTTCTGCTGGA ACTGCTGACAGGAAGAAGGGTAGTGGAAAAGTCCCAGTCGAATCGAGGGAGGAGCTTGGTGGAATGGGCAAGACCTATGC TGAGAGACCAGAAGAAGCTGCACCGGATCATAGACAGAAAACTTGAAGGCCAATTTCCATCCAAAGGAGCCATGAAAGTT GCTATGTTGGCTTTTAAATGCTTGAGCCACCATCCAAATCCAAGGCCCTCCATGAGTGATGTGGTGAAGGTTTTGGAGCC ACTTCAGGACTTTGACGATGTTCTCATAGGGCCATTTGTGTATGTCGCTGTCAATGAAAACGGCGACAAGGATAAAATAT AG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0048400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTACTAAAAGGGTTACATGGAAGTCTATGAACTTGATCCTGAGCTGTTACAAGACTAAGTTCCCATTGGAGGATTC TGAGAAACGGGTTTTGAAACAAGGATCATTCCAGAGGTTGTGTCTATCTGATGTAAGCAACTCAAGCTCTACTCAAGCCA TTGAAGATCTTTCAGTTTCATTTGGTGGTTCAAAACTTTATGCATTCACACTTGAGGAGCTGAGAGAGGCAACAAGAAAT TTCTCATGGAGTAACATGCTTGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGCTTTTTTGATGACAGACTCAGGCCTGG TTTGAAGGCTCAGACAGTGGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTA TATTTCTTGGACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAAAACAGGCTATTGGTG TATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAAATACTCTGCTGCCATGCCATGGTCTACAAGGAT GAAAGTTGCATTAGGTGCTGCTAAGGGGCTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATCTACAGGGATTTCAAAG CTTCAAACATCTTGCTAGACTCAGACTATACAGCTAAACTCTCAGACTTTGGTCTTGCTAAGGATGGCCCTGATGGGGAA GAAACACATGTAACAACGCGCATCATGGGAACACATGGCTATGCCGCTCCTGAGTACATCATGACAGGAAGAAGGGTAGT GGAAAAGTCCCAGTCGAATCGAGGGAGGAGCTTGGTGGAATGGGCAAGACCTATGCTGAGAGACCAGAAGAAGCTGCACC GGATCATAGACAGAAAACTTGAAGGCCAATTTCCATCCAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTG AGCCACCATCCAAATCCAAGGCCCTCCATGAGTGATGTGGTGAAGGTTTTGGAGCCACTTCAGGACTTTGACGATGTTCT CATAGGGCCATTTGTGTATGTCGCTGTCAATGAAAACGGCGACAAGGATAAAATATAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0048400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTTKRVTWKSMNLILSCYKTKFPLEDSEKRVLKQGSFQRLCLSDVSNSSSTQAIEDLSVSFGGSKLYAFTLEELREATRN FSWSNMLGEGGFGPVYKGFFDDRLRPGLKAQTVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLV YEYMPRGSLENQLFRKYSAAMPWSTRMKVALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPDGE ETHVTTRIMGTHGYAAPEYIMTGRRVVEKSQSNRGRSLVEWARPMLRDQKKLHRIIDRKLEGQFPSKGAMKVAMLAFKCL SHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVNENGDKDKI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621
5 263 259 3.3E-227 –
PANTHER
PTHR45621:SF80
5 263 259 3.3E-227 –
Gene3D
G3DSA:3.30.200.20
42 163 122 5.8E-34 –
SUPERFAMILY
SSF56112
58 338 281 2.43E-67
IPR011009
ProSiteProfiles
PS50011
81 341 261 32.259
IPR000719
Pfam
PF07714
83 337 255 1.1E-36
IPR001245
Gene3D
G3DSA:1.10.510.10
166 340 175 2.2E-37 –
ProSitePatterns
PS00108
207 219 13 -
IPR008271
PANTHER
PTHR45621
261 363 103 3.3E-227 –
PANTHER
PTHR45621:SF80
261 363 103 3.3E-227 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0048400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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