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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0055100 |
| Transcript ID | LotjaGi5g1v0055100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|B8AEH1|ORR23_ORYSI Two-component response regulator ORR23; TrEMBL-Plants: tr|A0A0B2SP78|A0A0B2SP78_GLYSO Two-component response regulator ARR12; Found in the gene: LotjaGi5g1v0055100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9345752..9350750) extracted from Lotus japonicus Gifu genome v1.2.
GTCAAATGTTTCCCTTTCAAGCGCGTGAACACAACGCTTCAATATTTTCCCAGAAAATTTTCAAAATCAGGGAAAATTTT CTCCTTTTCTTTCGCAGCACACCTTACATATGCATATATAGCTCAAGATTCTGTATCTTTCACACTCAACAGTGAGACAA TAACATCATAGCCCCACAAACATGCATTCATCACTCCTAATTCTTCTCTCTGTCAACGATATTCTTCCTTAAAATCCAAA CTTACCTGTTTTTTTGATGATTTTGCCTCTGTTTTATAGATTCTGTTTTGGTTTTTTCGGCCCATAAAACAGAGAGTCAA CCTTGATTCAACGTTGACCCTTTTTCCCAGACAATGACCGAGGTGGAGAATCATAGCAAGATGGATGATCCCACTGACCA GTTTCCAGTAGGAATGCGTGTTCTTGCTGTTGATGATGATCCAATTTGCTTGAGGATTTTGGAGGCTCTGCTTCAGAAGT GTCAATACCATGGTCTCCTTCTTCTACTCTTGCTTTTGCAAAATTTTCTTTCTCTCTTTTCAATACTAGATAAGTATATA AGGTTTTGTACTTCTGTTGAATTTGTTTTTTGTTTGGTTGATTTGGTTTTGCATGTAACAAATCTTTTGATAGGATGTTC ATTTTGTTTTGGGGATCCATATATTTATGTGTAAATATATGTGAGATTGTATCAATGAAGTTGAACAATTGTTTTTTTGT CAAATATCTATTTTTCTACATTATGATATTGCTGTTTCATTGTTTGTGAAATGATGGCTTCGATTGAAATGATGAGATTC TTTCAGTGTCTGGACAGGATTTGCAATTTAAAGTTCACAATTTTTTTGATATCCCTGTGTGTTGGATCTTTGCTGATTCT ATTTTGCTTCTTTGGCTTCAAAGATTTTTAATCGAATCTAAATTATGATCAAAATTATTTTTTGATAAACATTTCACTGG TTTTCTTGTTCTGAATGATTTGGGGTATGGATTTTGCAGTTACTGCGACTAAACACGCACCGACGGCGCTGCAGTTGTTG AGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTCCACATGCCAGACATGGATGGATTCAAGCTTCTTGAGCT TGTGGGGCTTGAGATGGACCTACCTGTCATAAGTAAGTCATAATCTTATATGAAATCTTCAACAATTCAACTTTTTCAAC TTTTCAGTTTGTTTTCAGTTCTATAATTTTGTATGTACCGTTGACTATTGATTAATGATGATATAGTTTCGAATAAGGTT AAATATAGTTAATATATTTTAGATTTTTCATGCATTGAGGTTTTGGTTTTCTGATGTCCTTATATATATTTTATTACTAC CAAAGATTTGTAGGATTTTTCTTGTTTTGTAGAGCATAAAAGGAATTGTTTGACATGGTGGTTGTGTGTTGTGTTTTGAT TTTGTTTGAAGTTTCAGAATTGATTTATAAACATGAAACTTTGGTGTGCAAGTGAAAAGTAAGCTTAGGAAGATTTCCTT GACGTCTTCATTTGGCTAATTTTATATGATGTTTGATTTCAGTGTTGTCTGTCAATGGCGACCCGAAGATGGTGTTGAAG GGAATTACTCATGGCGCTTGTGATTATCTGCTGAAACCTGTTAGAGTTGAGGAGCTACGGAACATTTGGCAGCATGTGGT CAGGAAGAAGAAGAAGACTGTCCCGAAGGAAGGGACCAAAACCGGCAACCAAGACACTCCTATTTCTCATAGTGACAACG GTCAAGGGTCGGCAGCGACAACAAATTCCGATCAAAATGGAAAATCATCCAAGAAAAGGAAGGACCTGGAGGAAGATGAT GATAATGAGGTGCATGAGAATGGTGACGACAGTGATGACCCATCAGCTCAGAGGAAGCCTCGAGTTGTTTGGTCGGTTGA CCTGCACCGCAAGTTTGTTGCTGCCGTCAATCAGTTAGGCCTGGATAGTAAGTTTGTTGCAAAAACATTGCCACAATAGT TTCTATAAATTACTACAAGAGCTCAATCAGTTATTGTTTTCTCTTTTTTTTTAACCTTTTTATGAATTTTCTATGAAATA TTTGATAAGCATTTATGTCATGATCTTTTTTTATGCCATACCATTAAGAGTTTAGTCGCCGAACTGTCCTTTATGATAGT GTTGTTTTGGTCGCAGAGGCTGTACCTAAAAGAATTCTTGAAATGATGAATGTTGATCAGCTTACAAGGGAGAATGTTGC CAGCCATCTTCAGGTGATTGTTTTATCCTTTCTTCTATAGATCCCGTTACTAAAGAGCACTTATTGGACCTTATAAACTA AAAATTGCAGTGAATAAGCTCCGGTAAGTGCTCTTTGGTCCGCATCCAAACATGCTAAGACGGTCATACGACCTGACCTG AGCCTTTTCATTCATGAAACATTGCTGGTTTTTGCAATGGCTGCAGAAATATAGACTTTATCTGAAGAGACTTAGCTGTG TGGAAAACCAACAAGCTAATATGGTGGCAGCCTTAGGCAGTGCAGATCTGTCCTACCAACAAGCTCATATGGTAGCAGCC TTAGGCAGTGCAGATCCATCCTATTTGAGAACGGGTTCTCTGAGTGCGCTCGGACATTTGCGGACATTGAACGCATCTCG ACAGTTTCACAACAATGCTTTCAGATCCTTCACACATGATGGGATGGTTAGTAGAATGAACCCTCCTTCTAGTATGAATG TGCAAGGGTTGCCTTCTTCGGGAACTCTTCAGGTGATTCAGGCACAAAATTTAAACAATTCCATGAATGGCAGCCAACTT AAGTTCCATTCAGCTCTCATTGGTGGGAATCAGAATGATCAATTGCAACACAACAAGGGTGTTAGTCATATTCAAAACCT GAACACTAATTTTAATGCTAAACCCACTTTTCCCATCACCAATCAAAGACAAGGTGGGTTGAGTATCTCAAACAACGCCT TGATGTTAGAAATGAATCCTCAACACAAATTAATGGGAGGAGTTTCTACTTCATTAGCCCCACAACAACATTCACAATTC TCTCTCCCTTTGATGGATAATGGAAGGTTGAATGATGGTTGGCCCAGTGTTTTCCATTCATCTGGAAAAAATTCTTACAC TCCAAGCGAACGTTTTGGACCGGCTTCTATGACTCCTACAAATAACATGAATCTGAGTGGTGCACCCTCCCCAAATTCAT TGACAGATATGCACTCTAAAGGTGTCACTTTTACAAATACTCCTCCTGGGCAAATAAGCAATAGTGTTTCATTGCAAGGG TGGAATAATCATAATAATCTGAGTGGCGGTTACAATTCTCATGTTATTGGTAACTCAATAGGCTCTACGATTCCCCCGAA TGGTGGTGTTCCAGACGGCAATGCTTCGATGAACTCAACCTTCAATTTTGGTGATCCCTTACAAATGAAGCATGATGGGA TCATTGAATTACCTGGAGAGCCCTCATTGATACCACATCAGCAGGTACATGTAATGAACCAGCAGAAGCCTCGTCACAGC CGCTTCTCGAATAGTGTGGGTTCCCTGGAAGAATTGGCCAGTGCAATGATGATGAAACAGGTAATAAAACATGTATGCAA TATAATTGTAGTTTCTGTATGATTGTTGCTTTTAACATATTAATTGCATTCAATCCTTATATAACTAATAGCTTAAATTA CCGTTAAGTTCTGATACTAATTAGTTTACCTATTTATGTATTTTCTTGGGGCTTTTTCTTGGGGCTTATGCCTATGTGAT AACAATTTTTCTTCATTTTTTTTGAAATAACTTGATGCCAACACAGAAGGCAATAGAGATTGACTGATTTCCCTGTTTAT TTACATTTTAAACTGGATGAAGGTCATAGTTATATTATGTTATTTATTTTTAGTAATGAATTTCACTTATTGATGAGAAA TTCAACCGGGTACTACCTACACATGGGTAATGATTCATGAATTTAACAAAATCTTTTTCCTTGATTATCTTATTAGCCCT TGAGATATTGCCCTTTCCTCTCTAAAGTGGAGTACCTACTACAGGGGAGGCAAATCCATGTTTTAGACACACATTAATAA TTTTGTGGACATTTTATTTCCACCAGAGCTAACTTGAAGAATAAATTCATCTATTTAAAGCTTCATTGTTAGTGTTGGAC TTTGAAACCCAGACCCAAAATCTTCCTGTAGTTTAAAAGACTCCGGGTGGACCAAAAAAATTCAATAGTTAAGGATGAGA ATGATGGGCTTAGTGTGTGCATTGTCTGTCCAAAATCTTTATGTCAATTGGACATAGAACACCTAAAGTTATATATTTTT TTCACTCTTCGAACTATGCAATGTGGGATAGTTTCAACAGTTTGATAATAAGGCCTGACTAATTTTTAAGTTGGTTCATG TTTGTCTATGCAGGATTTGCAAACATAAATTTGATCTCTGAAGCTGTTTTACAATGTAGTTTGTGATTCATTTTTCTCTA ATGTTTGCTGATCTAATATTAACATTGTCATTTGACGCAGAATCACGACATGTATGGATTCCGCCGCGATAACAATCATT CTGGTGGTGGTGGTGGTGGTGGGGCACCTCTGTGACTGCAAGTTTGGCCGTACATATATGGATCATCATTGTCATGCTTG TTGATGAATTTTTCCAGTCTTCCATTTACTGTTTTCCCAGTTTTGTCTTGACAGAAAGTTTCTCATGGTGCAGCTTCTCT AGTTTTTGGTAGACATGGTTTTTATTTTTAATTTTTTGCAAATTTTGTTTGCGTTGCATATACAAGAATAAGATAATTAC AGTGACAAAACACTGGATTTTTCCAATTATTATGAATGCACGGTAGCATTCATTGATTATTTTAGCAATAAACTCATTCT TATTATTTTTGCTTCTCAAGTTTACACGTTTTTGAGGTGAACAAACGTATATGATAGTGTATATACCAAGTTCAACTTTT TCATCTTCCCACGAGACAACTAATGTCTTCCTATTAGCT
CDS sequence (LotjaGi5g1v0055100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCGAGGTGGAGAATCATAGCAAGATGGATGATCCCACTGACCAGTTTCCAGTAGGAATGCGTGTTCTTGCTGTTGA TGATGATCCAATTTGCTTGAGGATTTTGGAGGCTCTGCTTCAGAAGTGTCAATACCATGTTACTGCGACTAAACACGCAC CGACGGCGCTGCAGTTGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTCCACATGCCAGACATGGAT GGATTCAAGCTTCTTGAGCTTGTGGGGCTTGAGATGGACCTACCTGTCATAATGTTGTCTGTCAATGGCGACCCGAAGAT GGTGTTGAAGGGAATTACTCATGGCGCTTGTGATTATCTGCTGAAACCTGTTAGAGTTGAGGAGCTACGGAACATTTGGC AGCATGTGGTCAGGAAGAAGAAGAAGACTGTCCCGAAGGAAGGGACCAAAACCGGCAACCAAGACACTCCTATTTCTCAT AGTGACAACGGTCAAGGGTCGGCAGCGACAACAAATTCCGATCAAAATGGAAAATCATCCAAGAAAAGGAAGGACCTGGA GGAAGATGATGATAATGAGGTGCATGAGAATGGTGACGACAGTGATGACCCATCAGCTCAGAGGAAGCCTCGAGTTGTTT GGTCGGTTGACCTGCACCGCAAGTTTGTTGCTGCCGTCAATCAGTTAGGCCTGGATAAGGCTGTACCTAAAAGAATTCTT GAAATGATGAATGTTGATCAGCTTACAAGGGAGAATGTTGCCAGCCATCTTCAGAAATATAGACTTTATCTGAAGAGACT TAGCTGTGTGGAAAACCAACAAGCTAATATGGTGGCAGCCTTAGGCAGTGCAGATCTGTCCTACCAACAAGCTCATATGG TAGCAGCCTTAGGCAGTGCAGATCCATCCTATTTGAGAACGGGTTCTCTGAGTGCGCTCGGACATTTGCGGACATTGAAC GCATCTCGACAGTTTCACAACAATGCTTTCAGATCCTTCACACATGATGGGATGGTTAGTAGAATGAACCCTCCTTCTAG TATGAATGTGCAAGGGTTGCCTTCTTCGGGAACTCTTCAGGTGATTCAGGCACAAAATTTAAACAATTCCATGAATGGCA GCCAACTTAAGTTCCATTCAGCTCTCATTGGTGGGAATCAGAATGATCAATTGCAACACAACAAGGGTGTTAGTCATATT CAAAACCTGAACACTAATTTTAATGCTAAACCCACTTTTCCCATCACCAATCAAAGACAAGGTGGGTTGAGTATCTCAAA CAACGCCTTGATGTTAGAAATGAATCCTCAACACAAATTAATGGGAGGAGTTTCTACTTCATTAGCCCCACAACAACATT CACAATTCTCTCTCCCTTTGATGGATAATGGAAGGTTGAATGATGGTTGGCCCAGTGTTTTCCATTCATCTGGAAAAAAT TCTTACACTCCAAGCGAACGTTTTGGACCGGCTTCTATGACTCCTACAAATAACATGAATCTGAGTGGTGCACCCTCCCC AAATTCATTGACAGATATGCACTCTAAAGGTGTCACTTTTACAAATACTCCTCCTGGGCAAATAAGCAATAGTGTTTCAT TGCAAGGGTGGAATAATCATAATAATCTGAGTGGCGGTTACAATTCTCATGTTATTGGTAACTCAATAGGCTCTACGATT CCCCCGAATGGTGGTGTTCCAGACGGCAATGCTTCGATGAACTCAACCTTCAATTTTGGTGATCCCTTACAAATGAAGCA TGATGGGATCATTGAATTACCTGGAGAGCCCTCATTGATACCACATCAGCAGGTACATGTAATGAACCAGCAGAAGCCTC GTCACAGCCGCTTCTCGAATAGTGTGGGTTCCCTGGAAGAATTGGCCAGTGCAATGATGATGAAACAGAATCACGACATG TATGGATTCCGCCGCGATAACAATCATTCTGGTGGTGGTGGTGGTGGTGGGGCACCTCTGTGA
Protein sequence (LotjaGi5g1v0055100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEVENHSKMDDPTDQFPVGMRVLAVDDDPICLRILEALLQKCQYHVTATKHAPTALQLLRENKDKFDLVISDVHMPDMD GFKLLELVGLEMDLPVIMLSVNGDPKMVLKGITHGACDYLLKPVRVEELRNIWQHVVRKKKKTVPKEGTKTGNQDTPISH SDNGQGSAATTNSDQNGKSSKKRKDLEEDDDNEVHENGDDSDDPSAQRKPRVVWSVDLHRKFVAAVNQLGLDKAVPKRIL EMMNVDQLTRENVASHLQKYRLYLKRLSCVENQQANMVAALGSADLSYQQAHMVAALGSADPSYLRTGSLSALGHLRTLN ASRQFHNNAFRSFTHDGMVSRMNPPSSMNVQGLPSSGTLQVIQAQNLNNSMNGSQLKFHSALIGGNQNDQLQHNKGVSHI QNLNTNFNAKPTFPITNQRQGGLSISNNALMLEMNPQHKLMGGVSTSLAPQQHSQFSLPLMDNGRLNDGWPSVFHSSGKN SYTPSERFGPASMTPTNNMNLSGAPSPNSLTDMHSKGVTFTNTPPGQISNSVSLQGWNNHNNLSGGYNSHVIGNSIGSTI PPNGGVPDGNASMNSTFNFGDPLQMKHDGIIELPGEPSLIPHQQVHVMNQQKPRHSRFSNSVGSLEELASAMMMKQNHDM YGFRRDNNHSGGGGGGGAPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 288 | 288 | 8.6E-179 | – | |
| PANTHER | 1 | 288 | 288 | 8.6E-179 | – | |
| Gene3D | 16 | 152 | 137 | 1.9E-33 | – | |
| SUPERFAMILY | 20 | 141 | 122 | 2.56E-34 | ||
| SMART | 21 | 133 | 113 | 4.8E-32 | ||
| ProSiteProfiles | 22 | 137 | 116 | 41.893 | ||
| Pfam | 23 | 132 | 110 | 5.6E-24 | ||
| CDD | 24 | 136 | 113 | 3.97899E-27 | ||
| MobiDBLite | 138 | 208 | 71 | - | – | |
| MobiDBLite | 149 | 176 | 28 | - | – | |
| Gene3D | 205 | 268 | 64 | 4.2E-32 | – | |
| ProSiteProfiles | 206 | 265 | 60 | 10.745 | ||
| SUPERFAMILY | 207 | 266 | 60 | 2.69E-19 | ||
| TIGRFAM | 209 | 262 | 54 | 4.4E-25 | ||
| Pfam | 211 | 261 | 51 | 2.2E-6 | ||
| PANTHER | 288 | 500 | 213 | 8.6E-179 | – | |
| PANTHER | 288 | 500 | 213 | 8.6E-179 | – | |
| MobiDBLite | 491 | 534 | 44 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi5g1v0055100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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