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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0091300 |
| Transcript ID | LotjaGi5g1v0091300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol transfer protein; TAIR: AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|Q56Z59|PATL3_ARATH Patellin-3; TrEMBL-Plants: tr|A0A151S2I8|A0A151S2I8_CAJCA Patellin-3; Found in the gene: LotjaGi5g1v0091300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:15962658..15967004) extracted from Lotus japonicus Gifu genome v1.2.
CACTTACATTCCAAACCCCACTCTCTCTACGCCTTTTAAATTCAACTCAAACAAACAAACTGTCACTATCATTGAAATCC TTATTTTTCATCAACATGGCTGCAGAAACCAGCAAAACAACTCAAGAGTCACTGTCACTTGCGGCGGAGCAACTGGTGGT TACTGATGTCGCCGCCGCCGCTGTAGTTGACAAGGAAACACAACAGCCCAAGCCCGAGGAGGAGAAGCCTGTGGAGGCTG AAACTGAGGTTTCTAAGCCCAGCGGCGGTGATGAAATTCCTGAATCAGGTTCGTTCAAGGAAGAGAGCAACATCGTTGCT GATTTACCTGATGCAGAGAACAAAGCGCTGCAAGAGTTCAAACTTCTTGTTCAGACCGCGCTCAACCACCATGAATTCTC TGTGCCGCCGCCGCCGCCGCAAGAAGGTTCTGATGCTTCACCGGAGGAGGTGTCGATTTGGGGGATTCCGCTTCTTGCAG ATGAAAGAAGCGACGTGATTCTGCTGAAGTTTCTGCGTGCCAGGGATTTCAAGGTGAAGGAGGCGTTTGCTATGATCAAG AGCACGATTTTGTGGAGGAAGGAGTTTGGAATTGATGGATTGCTAGAGGAAGATTTAGGAGATGATTTGGAGAAAGCGGT GTACATGCATGGTTCTGATAAGGAAGGTCATCCTGTGTGTTACAACATCTATGGGGAGATTTACAAGAAAATGTTTTCTG ATGAGGAGAAGAGGCACAAGATTCTGAGGTGGAGAATTCAGTTCCTGGAGAAGATTACCAGGAGGCTTGATTTCACTCCT GCTGGTATTTCCACCATTGTTCAGGTCAATGATCTTAAGAATTCTCCTGGACCTGCTAAATGGGAGCTTAGACAAGCTAC CAAACATGCCCTTCAATTGCTTCAGGATAACAACCCTGAATTTGTAGCTAAACGTGTGTTTATCAATGTGCCATGGTGGT ACTTAGCAGTGATCAGGATGATAAGACCTTTTCTCACACGGAGAACCAAAAGCAAGTTTGTTTTTGCTGGTCCTTCCAAA TCAGCTGAGACTCTTCTAAGATACATAGCAGCAGAGCAGCTACCAGTCAAGTATGGTGGACTAAGCAAAGATGGTGAATT CGGAGTAAACGATGCTGTTACTGAAATTACAGTGAGGCCCGCTGCTAAGCACACCGTGGAATTTCCGGTTACTGAGAACG GCTTACTCTGTTGGGAGCTCAGAGTTATAGGGTGGGATGTGAGCTATGGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGC TACACTGTGATCATCCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAGCCAGTTCTTTGCAACAACTATAAAATTGGTGA ACCTGGGAAAGTTGTTCTCACCGTTGACAATCAAAGCTCTAAGAAGAAGAAGCTTTTGTACCGGTTGAAGACCAAGCCAA CTTCTGACTGAGATTCTCACCATTGGTAGTTCTGTCATGCACCCAAGATTTCAAAGCTATGAAGTTTTTCAAGTTTTAAT TTTAATCATCATGAGTCCAAGCATAATACACTCTTTTTGCTTTTCTTTAACATTTATTATTATTATTATTGGAGGGGATC TTTTCATTTTTGAATTCTTATTATTGATATATGGTATGGAAGATTTTTATATTACTCTATTCTTACGTATAAATTTCATT TCATGTGAATTTTGGTGGGGCCTTTTTATCTGTATATATGTTTGTCGTTTTGTCTGTTCTCAAACTTAAAAATATGTGCT CCTGCGCCGTTCACCTCGCCGTCAGCGTTAAGGTGTGTTCCAAAAGGATGTTCGACACTATCAAAGGGAAGGAATTTGAG GAAGAAGATAACCTAAATTGATGAAAATGAAATTGGAAGCTAAGGTCACAGTTCCCTTTTCTTTCTTTTTTCCATGTTGA ATCTCGTTATGGTCTTTCGAGTGAAAGCTCTGTCTTTATTTTTGTCAGATGGAAGACTATGTTGAAGGAGGCGCTGCACG CAGCTGATCATGTTGTCACTTTTAGCATCAACTTTAGTCATTACCAATGCTTACATTATCTAGGTTTAGCATTTATTTTG AAGAACATGATCTCGTGTATTGTTTGTGTTGTTTGATGTATTTCTTAACTCTTGAGTGAATCTGATGGGTTTTCCATTTG CTAGACATGGCTGGTGGGAAAAAGAGTGCTCCTACCGCAACTAAGTAACCTCGTCATCCCCTGAAAATCAATGGGTTCAA GGTGTTTTGTAGTTTTTTAATTTGGTTGGACTGAGGAAGCCCTTATTAGGATGAATGGAAGCAAGATATTATATGTGGCA TGATGCATCTTGTATTTGTTTTATTGTAGAGTTGGATGCATGGTGGCTAGCATGGAGGACATTAAGGTTTCTGCTGTAGT ATGCTTGGGCTACCCATTAAATGTTTGATGCTCTTTCTGATAATCTCATGTCAATCTCTTGCCTACAGAATTAACTGATT GCGTACTTTGTTTTTGTGTCTTTTACCATGGGACAAGGTACTGCTTTTTTTCTTTATTTGTTTATCTTTAGGGTATCCTC CTTTTGCAATATGTGAGTCAGTTAAACTTTTTTTTTTGATTGTTCTGTGTTTTTTTTGATTGTTGAGTCAGTTAAACTAA TTAAGTTTTGAATTGCTTAAACTGTGTGAGTCAGTTTTATTAATTTAACTGTGAAAATTTGATTCTAAATTGACATAAAA CTGGAATCCAAAATGTGTGATTCCATTGCCATTCTTAATCATAAGTCATAAATATAAGTTTTTTAACTTGGTCTATGTTG TATTTCACTTTCCTTGTCATATATGATTTGGGCATCTTGTACTGTCAGGCCCTAGCAGATCCATATTTGAGTACATTAAT TTGGAACTGAAGTTATGGTCTAGCAATTTGCATCTGTGTATTGGTTTGGAAATGGAAAATTTTAAGGCTTTCATGTGTTC TTACAATAACTAGATACTTATTATTGCGATTGGTTTTGCAGCCACTTCAGAATGAGGCTGGTTTGACAATTAAGTGGATA AAAAAGTGTAAAGATGGTTATAAAATGCTGAATTGTTTTCGTTGCAACCAGGTCCACCGTGAAAGATACTTGCAAATGAT TTTGTTGCTGTTCAGAGTTGTATTTCAAATTGAAAAAATTCTTGAGATTACTACCCTTTACCTGTGTTTTTTAAATGTAT ACTATCTCAGCACCTCAAAGTAGTTACTCTTTAAACAAGAGCAATAAAGTGTACTCATAACCCCCTCTATCCATATTATA TTGTTTCAGCACCTTGAGGAACTTTTTGTTTACCAGTCCCATAAAAAATTATTGTTATCCCAAGAGAAAAGGAAAATGTA TTGTTATTCATCTATCTTTGTGGATGTAGTGCTTCTGTTTTTTTTATGCTTAATAACATAAAATGTCTTCCACTCTTTGA ATGCATGTGAATAAAGTGCCTTCAGTTGGGCTGGTTTGCTTCAAATTTTTATTTTGGAGTCAGATGTTAATTCTTCAGGT ATCATCTTGTAACATGTTCAAGTGTGTAGCTATTTATAATAAACAAATAAGTTTCATATATCAAACAAAATAATGCTTCA ATCTGAGTCTGCTAGTCTTCAAGCTTACCTATGCTTGCCATAAATTTACGATGCATTTTTTTGCAATTTACTTGCTTATT AATGAATGCTTTGATTTAAGCTTGAATATGCTTGTAAATTGAGGATTCATTTACTGAACTTCTACTTATTGGTTGTTTAT TGTGTGTGTGTTAGAAACATGGATGTGTCTGAAAATAGGAAATTGATGGATAATAGTCAATAAATTGGACTGTGATAAGC ACGTGACAGAGGAATTTCTTATAGTAATTCATGAATTAGCGAGGGAACAATTCCGTCGCTAAATTAGCGAGGGAACTACC GACGGAATGGAAATATAAATGCAGGCAATTAGCGACGGAATGTGATCTTTAGCGACGGATTGTTTCGTCGCAAATAGCGA CGGAATAAGAGCCAATATGGCAAACAATATAGCGAAGGAATTATATAATTTAGCGACGGAAAATTGACAGCGACGAATTA AAGAATCCCTCGTTAAATATTTACCGACGCCACTTAACACGGCGGACGGAGTTCCGTCGCTAAATCTTTAGCGAGGGAAT TTCCCTTATTTAGTGACAAATTTTGTCCCTCGCTAATTTGCTCTTTTTTAGTAGTGTCTGGTGATGCAGCAGTGCTCTCT TCACGAACCTTGCAGATCCGGCGGTGGCAAATAGGCATGGGTCTAAAGATGGAGGCTAGAGTGGCGTGGGAGTGGTGGGT TTGCAAGTAGAAGAGCTCTTGAACAGG
CDS sequence (LotjaGi5g1v0091300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAGAAACCAGCAAAACAACTCAAGAGTCACTGTCACTTGCGGCGGAGCAACTGGTGGTTACTGATGTCGCCGC CGCCGCTGTAGTTGACAAGGAAACACAACAGCCCAAGCCCGAGGAGGAGAAGCCTGTGGAGGCTGAAACTGAGGTTTCTA AGCCCAGCGGCGGTGATGAAATTCCTGAATCAGGTTCGTTCAAGGAAGAGAGCAACATCGTTGCTGATTTACCTGATGCA GAGAACAAAGCGCTGCAAGAGTTCAAACTTCTTGTTCAGACCGCGCTCAACCACCATGAATTCTCTGTGCCGCCGCCGCC GCCGCAAGAAGGTTCTGATGCTTCACCGGAGGAGGTGTCGATTTGGGGGATTCCGCTTCTTGCAGATGAAAGAAGCGACG TGATTCTGCTGAAGTTTCTGCGTGCCAGGGATTTCAAGGTGAAGGAGGCGTTTGCTATGATCAAGAGCACGATTTTGTGG AGGAAGGAGTTTGGAATTGATGGATTGCTAGAGGAAGATTTAGGAGATGATTTGGAGAAAGCGGTGTACATGCATGGTTC TGATAAGGAAGGTCATCCTGTGTGTTACAACATCTATGGGGAGATTTACAAGAAAATGTTTTCTGATGAGGAGAAGAGGC ACAAGATTCTGAGGTGGAGAATTCAGTTCCTGGAGAAGATTACCAGGAGGCTTGATTTCACTCCTGCTGGTATTTCCACC ATTGTTCAGGTCAATGATCTTAAGAATTCTCCTGGACCTGCTAAATGGGAGCTTAGACAAGCTACCAAACATGCCCTTCA ATTGCTTCAGGATAACAACCCTGAATTTGTAGCTAAACGTGTGTTTATCAATGTGCCATGGTGGTACTTAGCAGTGATCA GGATGATAAGACCTTTTCTCACACGGAGAACCAAAAGCAAGTTTGTTTTTGCTGGTCCTTCCAAATCAGCTGAGACTCTT CTAAGATACATAGCAGCAGAGCAGCTACCAGTCAAGTATGGTGGACTAAGCAAAGATGGTGAATTCGGAGTAAACGATGC TGTTACTGAAATTACAGTGAGGCCCGCTGCTAAGCACACCGTGGAATTTCCGGTTACTGAGAACGGCTTACTCTGTTGGG AGCTCAGAGTTATAGGGTGGGATGTGAGCTATGGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACACTGTGATCATC CAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAGCCAGTTCTTTGCAACAACTATAAAATTGGTGAACCTGGGAAAGTTGT TCTCACCGTTGACAATCAAAGCTCTAAGAAGAAGAAGCTTTTGTACCGGTTGAAGACCAAGCCAACTTCTGACTGA
Protein sequence (LotjaGi5g1v0091300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAETSKTTQESLSLAAEQLVVTDVAAAAVVDKETQQPKPEEEKPVEAETEVSKPSGGDEIPESGSFKEESNIVADLPDA ENKALQEFKLLVQTALNHHEFSVPPPPPQEGSDASPEEVSIWGIPLLADERSDVILLKFLRARDFKVKEAFAMIKSTILW RKEFGIDGLLEEDLGDDLEKAVYMHGSDKEGHPVCYNIYGEIYKKMFSDEEKRHKILRWRIQFLEKITRRLDFTPAGIST IVQVNDLKNSPGPAKWELRQATKHALQLLQDNNPEFVAKRVFINVPWWYLAVIRMIRPFLTRRTKSKFVFAGPSKSAETL LRYIAAEQLPVKYGGLSKDGEFGVNDAVTEITVRPAAKHTVEFPVTENGLLCWELRVIGWDVSYGAEFVPSAEGSYTVII QKARKVASSEEPVLCNNYKIGEPGKVVLTVDNQSSKKKKLLYRLKTKPTSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 109 | 92 | 1.1E-242 | – | |
| PANTHER | 18 | 109 | 92 | 1.1E-242 | – | |
| MobiDBLite | 32 | 67 | 36 | - | – | |
| MobiDBLite | 35 | 56 | 22 | - | – | |
| Gene3D | 71 | 359 | 289 | 1.2E-59 | ||
| SUPERFAMILY | 72 | 173 | 102 | 1.01E-15 | ||
| PANTHER | 112 | 450 | 339 | 1.1E-242 | – | |
| PANTHER | 112 | 450 | 339 | 1.1E-242 | – | |
| Pfam | 117 | 155 | 39 | 3.0E-9 | ||
| SMART | 132 | 157 | 26 | 1.7E-7 | ||
| PRINTS | 135 | 157 | 23 | 2.1E-5 | – | |
| ProSiteProfiles | 171 | 341 | 171 | 19.16 | ||
| SMART | 176 | 338 | 163 | 1.3E-38 | ||
| CDD | 177 | 336 | 160 | 6.55131E-38 | ||
| Pfam | 180 | 335 | 156 | 4.3E-30 | ||
| SUPERFAMILY | 182 | 338 | 157 | 1.44E-37 | ||
| PRINTS | 293 | 312 | 20 | 2.1E-5 | – | |
| ProSiteProfiles | 345 | 446 | 102 | 9.853 | ||
| SUPERFAMILY | 346 | 445 | 100 | 2.22E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0091300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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