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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0091600 |
| Transcript ID | LotjaGi5g1v0091600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT2G36480.1 pre-mRNA cleavage complex 2 Pcf11-like protein; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|K7LHS7|K7LHS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0091600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:15998347..16006000) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGTGCAATTAAGCGTAGTGAAGATGAAATCCATCATATAAAAACGCCTCCTTAGTTACTTCTTGAGATACGTGACAA ACTAACTCGGCGTTCCTTGTCTGAAGAACGACCTCTGCTTTACTCTTCAACAGTTCCATCATCGAATTCTAACCTTTCTC TTTCTCTCTCTCTCTCTAACCCTTTCAATTTGGGGATTAGGGTTCCTTCTCCTTTCTCATTGTATCATATAGAATAGGGT TTAATTTTTTCCAATCTTGTATCATTTTCCCAATCAACGATGTTATTCTTACATTGTAATCTAGTTTTTATATGTTACTG TATCCAATTCGGTGTAAACTAGGATTAGGATTAGGGTTTTTGAACATTTGATTTTTGTGGGCATGGAGAGTAGCTCACGC AGACCATTCGATAGATCGAGAGAACCGGGTCTGAAGAGACCCAGAATGATGGAAGAACCAGAGCGTGTTGCTGCTGCTCA GAATCCAAGTTCTCGGCAGTTTCTTCCTCAGCGACAGCAACAAGTGGCGGCTTCTGGGATTTCAACCTTGTCATCTGCTG CAAGGTTGAGAGCTGCAGCTAACAGTAGAGACTTGGAAAGCAGTGATTTCGGTCGCGGCGACGGTGGTGGGGGTTACCAT CCACGGCCACCACCATTTCAGGAGCTTGTGGCTCAGTATAAGAGTGCCCTTGCTGAGCTTACGTTTAACTCGAAACCGAT AATTACCAATTTGACGATAATTGCAGGCGAGAATCAAGCTGCGGAGCAGGCCATTGCAGCTACTGTTTGTGCCAACATTA TAGAGGTGAACTTAGTTTATACTGTATTCATGTGTAGTTGATTGTCTGATCAATTGGGTAGTGATTCCTTTTGTTTTTTT GTTGTTGTTATGGACCTAATTGCTGATTGAATTGAATTGTTGTAAGTCATTTGGAATGATAAATCATTGTGGTCTTTCTG ATTGAAATGGTGTTGTTTCTTGTTATTCTGTGTGGTGTGTGGCAATTACTTTTTGAGTGAGAGAGAGAGCCATGGGGATT TTGTGTATTGCTTGTTTGCAATTAGTGGAATATGTTTGGTGTTGTAACTTGTAACAGTTATGGGACAGAGTTGCTATTGT CATGAGAAGAGATCTATTGTTTAGAAAGGACTTTCATGATTCATTCAATTCCATTACATGCAGCTCCTCAATGGAAAACA TGTGGATTGGCTTTGTGTTGTACGTTTTACCCTACCTAGAGATGAAGTTTCAACAGAAAAATGAAAATAAAAAGAAAAAA CTATGTAGCTTTACAAGCAAAATAATAGATGGTGGGGAGGGGGGGACTATCATTCTGCAATTGCAAAGATTATGTAAGTT TGGTAATCCATTTGGTACAGACAAGCGGCATCATTACAGAATGCTACTCCACAGTTCTCCTGGTTTTTTGTGGACTTTGT ATGCAGAGGGGAGTACGAATCATTGCAAACATTTAATTTTTACGGGCCAATGTTTCCCAATTATTGTTGCATTTCTCTTC TCTTTTTTTTTTGTAATAGACATTGTAATTGCACAGTATTTTTGCACTTGTGGAAGGTAGTTCTGTTTCATAGATAACAA GCATTAGCATCTTTCAAGTCTTACCTCTCAGGTTTGAGTCATGTACAGGAAAATACAATTTGGCCACATTTTTGGGGGGT TATTCGAGACAGAAAATTTGTATAGCCAAGATGAACAAAGACATTGTAGCTTGTATCATTTGGCTTTTGTGCTTGTGGAT TCACTTTGATTGAAGGGGCCACATGTAGCATGTAACTAAAGATAGCATCAGTAATTCATTTACGATCAATTGGATCAAAG AGCAGATGGAACTAGTCAGTGTTTGATATGATTTGGAAGATTGGATAGTCTTCATTTTGCAGCAATCAAGATTGTGACCA AGACATTTCATATTTGGTGATTTTTTTTCCTAAGGCTCTTTACATAAGTTGAACTTATTCCACGGAGTGCAAGATATGAT CAAAACTATCTACAAAAATGTGGAAGGTTTGCCCTGCATTTAATGTTAGTTTATGTGTTAGTTGCCTCCGTAGTATGAGA TGTAGGCTGTTTGAGGCAGCTAGAATAAGGAATGGAATGACCAATAATTTTGAACATATATGACATTAGCCAATTGCTGT TGAATATTTCTGGATTTTGATGTTTTTTTGCTGCTAATTTCTATGTGTGAGCTATATATTATTATTTTCTGTCATTTTCA TTATATCATATGTCAGGGTCTCTTATTTCTAGCTTTTTGATAACTAGTCTTTTTGTTGTATACAGAACGATCCTTTTTCA TTGAATTGTGTTAATGACTTTCCAGGTTCCGAGTGAACAAAAGCTGCCATCACTCTATCTCTTAGACAGTATAGTTAAGA ATATTGGGCGGGGTTATGTGAAATACTTTGCTGCCAGACTACCCGAGGTTGGATACTTATTCTTCTCTTAGCCTGTTAAT GTCCTTTATGTCTTTTTAGATGTACTTATGCATGTCTTTACTGTGGTCTGTGATGAATCCTTCAATTGTTCAGTTATGCA AAATGTACTAATGCATGTCTTTCCTGTGATTTGTTTTCTCATTTTACAAACCTGTTTTTAACTAGGTACTTGCTAATTAC TCCTTTTGTTTAGGTATTCTGCAAGGCATACCGACATGTTGATCCTGCTGTCCACCATAGTATGAGGCATCTTTTCGGAA CATGGAGAGGAGTCTTTCCTTCTCAGACCCTTCAGGCTATTGAGAAGGAACTGGGCTTCACACCTGCAGTCAATGGTTCA TCTTCCACATCTGCCACACTCAGGAGTGATTCACAGTCACAACGTCCACCTCCAAGTATCCATGTTAATCCCAAGTATCT TGAAAGACAGCGTCTTCAGCAGTCCAGCAGGGTAGGTGAAATGGTTGCACTTCAAAATTTTCTGTCTTATGAAACATTGA TATGATTTGAATGGATCAAGATATGACATTATTACAGAATACAGATTTATATTGGGATGAAAATCTTCATTCCTTTCATG ATGAAACCAGATGGGTAGATGTATGTTGTAATTTTTAAATCTTGTTGTTGCTTTTTGGGCCACCACAATATTCTTGCAAT CACTGTATTTTTTTGTTGGATTTTTCCAATGAACTGATTTATACTCCTTTTTTCTCCTGATTAATCATGAAATGTCCTTC TTTGTCTGTTGTTGTTTTATCTGATTGTTGACTTGTTGGATATCTAAGACAGCCCCAATTGCTTGGAGGCATACACTAGG AATTGCTCTTTTTGTTTCTATAGGTATTATCCACAGTATGCAGACCTATGATAAGTTATACGGCTATACCATTTGACATC CTGTCATGTTACTTTTGTTAGCCACATTCCTTTTGCTATCACATCACCAGTGCATAATTCTTTTGGCATGTACTTTTTCT TTCATGAAGACTAAAGGAGTTGATGATATGTCTGGAGCAATTGCAAACTCAAATGATGACCCAGAGATGCCTGATAGAGC TTTGGGTGTTAAACGACCAAGGGCGGATCCTAGTGTTAGTGTTCACTACCACTTAGAAGTAAAATTTCTTTTCCACTTAT GCTATTCTTTCTGTCAGTTGTTATATTTTAATGTTATAATCCACATTGCAGAATAATCAGCGCGCTCATAGAGATGCATT CAATGATTCTGTTCGGGAAAAGAGTATCAGTGCATCCTATGGAGGCAATGAATATGGTTCCGATCTTTCAAGGAATTTGG GCATGGGTACTGGCAGGACTGGTGGTAGGGTGGCCGAGTTAGGAAGTGACAAAAGTGGGTACAACAAAGCTGCTGGTGCT GGTGTTGCAGGGACCATATCTGGGCAAAGAAATGGTTTGAGTATCAAGAATAACTTTTTGAATACTGAAGCATCCATGAT TTTGGATGCACGTAATCAGCCAAGACAAAACATTAATAGCCTACAGAGAGGCGTAATGTCAAATAGCTGGAAACATTCTG AGGAAGAGGAGTTCATGTGGGATGAGATGAATGCTGGATTGACTGGTCACGATGCAGCCAGTGTCCCTAACAACTTGAGC AAAGATTCTTGGACTTCTGATGATGAGAATTTGGTAAGCTTGCCTGAATTTGATAACTTGGAAATTAGCTGATGCAGAAC AGAACCCGGGAAAGATATTAGAAACCAAAATTTTGATTATCAGATATATATCAGATTTAACTCCCTGTGATAATAGAATA GTTTTGTTAGGACACCCTTATTACAGACAACCCAAACCTAAGTCAAAAGACTTCAAAAATCCTAATCCCCAAGAGGAAAA AAATGTTCTATACCTTGGGATATCATATTCTGGAACTCTAACAGCTTGATCTTTTTTTTCCCCAAATTTCTAATATTTAA TATTTAAACCCTAAGGTTTTGTTTGGGAATTTTTAGGGGAAGGCTTTGAGGGGAAGGGGAAAGAGAGGGTGAAGGCAGGG TACGTGCCCTCCCTTTGTTTGTTAGTTCAAAATCCCATAAAATCCCCCAATTTGGGGTAACTTATATAAATAACTGAATT GGGGGTTTTAGAAATTCCCCAAATCTTTCCCCTCTTTTTAAAAACTCCCAAACATTGGGAGGCCTTCTCATACGCCTCCC CCTCCCCCGCCTCTCCCCTTCCCTCCCCTCCAAAACCCAACTCACAAACAAACCCTAAATCTCCAGTTACAAACACAAGT TCCTAAATTACAGATACAATAATCACCTCATTCTGCATAGTTAACATTATGTAGATTTATTGATTTTTTTTCTTGTTCAG GAGGTTGAAGATAATCACCACCAAAGCAGAAATCCCTTCGGGGCAAATGTTGATACAGAAATGTCCATTGAATCTCAAGC AACTGAAAGGAAACAATTACCTGCATTTCGGCCTCATCCATCACTATCATGGAAATTGCAGGAGCAGCACTCAATTGATG AGTTGAATCAGAAGCCAGGTCACTCAGATGGATTTGTGTCAACTCTTGGTGCCCTACCTACCAATACTAATTCTGCTGCT ACTAGGATGGGGAATCGGTCTTTACTGCCAAAGGCAACAATTGGCTTAGCAGGAAACCTGGGACAACTTCATTCTGTGGG AGATGAATCCCCTTCGAGAGAGTCAAGTTTGCGACAACAGTCTCCACCACCAGTAAGTGTGCACCTCCCTCATCTAATGC AAAATTTGGCTGAGCAAGACCATCCCCAGACTCATAAAGTATCTAAATTTTCGGGAGGTCTGCACAGCCAAAATATTAAA GATATTTCACCTGCCCTTCCTCCTAATATTCAGGTTGGGAAATTCCATAGATCACAGCTAAGAGACTTGCAGAGTGGTTC ATTCTCTTCAATGACGTTTCAGCCAAGTCACAAGCAGCAACTGGGCTCTTCGCACACTGAAGTTACTGCTAAGACTGAGA AGCCACACCTGTCTAAAGTTCCTCTGCCTCGAGAAACAGAGCAACCAACCACAACTCGTTTTGAAACTGCAGCTGGGAAG GGCGGAAAGTTATCCAACATGCCAATTACTAATAGGCTTCCTACTTCAAGAAGCTTGGATACAGGGAATCTTCCATCTAT ATTAGGAGTTCGGCCTTCCCAGTCAAGTGGTTCTTCCCCTGCCGGATTAATTCCTCCAGTGTCTGCAATTGCATCACCTC CCTCATTAGGTCGTCCCAAAGATAATTCCTCTGCTCTGCCAAAAATACCTCCAAGAAGGGCTGCACAGCCACCAAGGACA TCTGCTCTACCACCAGCTTCCTCTAATCTCAAAAGTGCTGCAGTCCAGGCATCAAGTTCTGCCAATAATGCCTTAAATCC AATTGCAAACCTTTTAAACTCATTAGTTGCAAAGGGTTTGATCTCTGCAGAAACCGAGACAACAGCTAAGGTGCCATCTG AGATGCTGACTCGATTGGAAGATCAAAGTGACAGCATTACCACCAGTAGCTCTTTGCCTGGTGCTTCAGTGTCTGGTTCT GCAGTCCCAGTCCCTTCTACCAAAGATGAAGTAGACGATGGTGCAAAAACACCTATATCCTTATCTGAATCAACCAGCAC AGAAATCAGAAATTTCATTGGCTTTGAGTTTAAGCCTGATGTAATCCGAGAGTTGCATCCATCTGTAATTAGTGGATTAT TTGATGATTTTCCACATCATTGCAGCATTTGTGGCCTTAAGCTTAAATTCCAAGAACAGTTCGATAGACACTTGGAGTGG CATGCCACAAGAGAAAGAGAACACAGTGGTCTAATTAAGGCATCGAGATGGTATCTGAAATCAAGTGACTGGGTTGTTGG CAAGGTTGAAAGTCTATCTGAAAATGAGTTCGCTGATTCTGTAGATAGATATGGCAAGGAAACAGACAGAAATCAAGAGG ATGCAATGGTTCTAGCTGATGAAAACCAATGCTTGTGCGTGTTGTGTGGTGAGCTATTTGAAGAGTTTTACTGTCAGGAA AATGGTGAGTGGATGTTCAAAGGGGCTGTTTATGTGCCTAACTCTGATATCAATGATGATATGGGAATTAGAGATGCGAG TACAGGAGGGGGTCCCATCATTCATGCAAGATGCTTATCAGAGAACCCAGTTTCCAGTGTCCTGAACATGGTAAGGCTTA TTATTTGATTTAAATGGACAGAATGAAGGCTTTCTAGTTTGGTGTTCAAAGCTCCAATCTATCTATTTGAAAGGTTGGGT GTGTTTGAAATATTGGATGGCTAGGCTCTCATATATTTAGGGTTGAAAGATGAGCATAAAAAATTAAACACACCCCGTTG TTACCCGAGCAATGCAAATGGTGGGCCTAGGTCCTCTGTTTATCAAGTTAAAATATGCTTACATCAAATTGAATGGGCTT TATTACTGGTAATTGATCTGACCCTGTTATATTTTGCAGGAGCAGGATTAAAGCAAGTTTAGACATTGGAGCTCTGATGT AGCAAAAATTAATAAGCTGAGGGAACCCAGGTTTACTTTGAATTTACCTATTCTTGATGGCTCTTCATACTAAATTTATT TACCAGTTGGTTTCTAGAGCTGTCAAGCAATTTTTTGCTCTCTTTTTTTTTTCTTTTTTGTTCTGTTTTGTTTTTGTTTT TAAACTCAGGAAGAGGTGCTAATTCCTTGGTGTTCAAAGTATATAAATGCGATAGTTTTTGCGGCTCAACTTGCTCATTG ATGTGTTGTGTATGTTCATTTTACCTGATGAAGCGGATTTATGCTTTTTTAAACAGCATCTTCTGGTTGTAATGTGAGGC AGAGCGTTAAGGTCATAGTTGTTGCAAATGTCTACTGGCGTTCTCTTATCACTAGAATTGCTACTATTCTGGTTACCTTT TTGCGTTGTCCTTTTATTCCCCTTTACATGGGACTTGGTATTGCAGTATTGTTAACTGGACATTACTTTCATAATTTCCA GAATTTCAGTTTTATAGACAATAATGGATATGTAATTTGTTTTACTTTTCCTGCTGCTGATCGATGCTGAGCCATTGTTT AATATTGATAAGAGTAAAGTACACTCACCCCCTTCAAGGTTTGTTAGAATTACACTCCACCCCATTCTTATCTAAAATCT ACACCCCACCCCATTTTATATAGAGGCAAATTTAGTGACGAAAAATATTTTTCA
CDS sequence (LotjaGi5g1v0091600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTAGCTCACGCAGACCATTCGATAGATCGAGAGAACCGGGTCTGAAGAGACCCAGAATGATGGAAGAACCAGA GCGTGTTGCTGCTGCTCAGAATCCAAGTTCTCGGCAGTTTCTTCCTCAGCGACAGCAACAAGTGGCGGCTTCTGGGATTT CAACCTTGTCATCTGCTGCAAGGTTGAGAGCTGCAGCTAACAGTAGAGACTTGGAAAGCAGTGATTTCGGTCGCGGCGAC GGTGGTGGGGGTTACCATCCACGGCCACCACCATTTCAGGAGCTTGTGGCTCAGTATAAGAGTGCCCTTGCTGAGCTTAC GTTTAACTCGAAACCGATAATTACCAATTTGACGATAATTGCAGGCGAGAATCAAGCTGCGGAGCAGGCCATTGCAGCTA CTGTTTGTGCCAACATTATAGAGGTTCCGAGTGAACAAAAGCTGCCATCACTCTATCTCTTAGACAGTATAGTTAAGAAT ATTGGGCGGGGTTATGTGAAATACTTTGCTGCCAGACTACCCGAGGTATTCTGCAAGGCATACCGACATGTTGATCCTGC TGTCCACCATAGTATGAGGCATCTTTTCGGAACATGGAGAGGAGTCTTTCCTTCTCAGACCCTTCAGGCTATTGAGAAGG AACTGGGCTTCACACCTGCAGTCAATGGTTCATCTTCCACATCTGCCACACTCAGGAGTGATTCACAGTCACAACGTCCA CCTCCAAGTATCCATGTTAATCCCAAGTATCTTGAAAGACAGCGTCTTCAGCAGTCCAGCAGGACTAAAGGAGTTGATGA TATGTCTGGAGCAATTGCAAACTCAAATGATGACCCAGAGATGCCTGATAGAGCTTTGGGTGTTAAACGACCAAGGGCGG ATCCTAGTGTTAGTGTTCACTACCACTTAGAAAATAATCAGCGCGCTCATAGAGATGCATTCAATGATTCTGTTCGGGAA AAGAGTATCAGTGCATCCTATGGAGGCAATGAATATGGTTCCGATCTTTCAAGGAATTTGGGCATGGGTACTGGCAGGAC TGGTGGTAGGGTGGCCGAGTTAGGAAGTGACAAAAGTGGGTACAACAAAGCTGCTGGTGCTGGTGTTGCAGGGACCATAT CTGGGCAAAGAAATGGTTTGAGTATCAAGAATAACTTTTTGAATACTGAAGCATCCATGATTTTGGATGCACGTAATCAG CCAAGACAAAACATTAATAGCCTACAGAGAGGCGTAATGTCAAATAGCTGGAAACATTCTGAGGAAGAGGAGTTCATGTG GGATGAGATGAATGCTGGATTGACTGGTCACGATGCAGCCAGTGTCCCTAACAACTTGAGCAAAGATTCTTGGACTTCTG ATGATGAGAATTTGGAGGTTGAAGATAATCACCACCAAAGCAGAAATCCCTTCGGGGCAAATGTTGATACAGAAATGTCC ATTGAATCTCAAGCAACTGAAAGGAAACAATTACCTGCATTTCGGCCTCATCCATCACTATCATGGAAATTGCAGGAGCA GCACTCAATTGATGAGTTGAATCAGAAGCCAGGTCACTCAGATGGATTTGTGTCAACTCTTGGTGCCCTACCTACCAATA CTAATTCTGCTGCTACTAGGATGGGGAATCGGTCTTTACTGCCAAAGGCAACAATTGGCTTAGCAGGAAACCTGGGACAA CTTCATTCTGTGGGAGATGAATCCCCTTCGAGAGAGTCAAGTTTGCGACAACAGTCTCCACCACCAGTTGGGAAATTCCA TAGATCACAGCTAAGAGACTTGCAGAGTGGTTCATTCTCTTCAATGACGTTTCAGCCAAGTCACAAGCAGCAACTGGGCT CTTCGCACACTGAAGTTACTGCTAAGACTGAGAAGCCACACCTGTCTAAAGTTCCTCTGCCTCGAGAAACAGAGCAACCA ACCACAACTCGTTTTGAAACTGCAGCTGGGAAGGGCGGAAAGTTATCCAACATGCCAATTACTAATAGGCTTCCTACTTC AAGAAGCTTGGATACAGGGAATCTTCCATCTATATTAGGAGTTCGGCCTTCCCAGTCAAGTGGTTCTTCCCCTGCCGGAT TAATTCCTCCAGTGTCTGCAATTGCATCACCTCCCTCATTAGGTCGTCCCAAAGATAATTCCTCTGCTCTGCCAAAAATA CCTCCAAGAAGGGCTGCACAGCCACCAAGGACATCTGCTCTACCACCAGCTTCCTCTAATCTCAAAAGTGCTGCAGTCCA GGCATCAAGTTCTGCCAATAATGCCTTAAATCCAATTGCAAACCTTTTAAACTCATTAGTTGCAAAGGGTTTGATCTCTG CAGAAACCGAGACAACAGCTAAGGTGCCATCTGAGATGCTGACTCGATTGGAAGATCAAAGTGACAGCATTACCACCAGT AGCTCTTTGCCTGGTGCTTCAGTGTCTGGTTCTGCAGTCCCAGTCCCTTCTACCAAAGATGAAGTAGACGATGGTGCAAA AACACCTATATCCTTATCTGAATCAACCAGCACAGAAATCAGAAATTTCATTGGCTTTGAGTTTAAGCCTGATGTAATCC GAGAGTTGCATCCATCTGTAATTAGTGGATTATTTGATGATTTTCCACATCATTGCAGCATTTGTGGCCTTAAGCTTAAA TTCCAAGAACAGTTCGATAGACACTTGGAGTGGCATGCCACAAGAGAAAGAGAACACAGTGGTCTAATTAAGGCATCGAG ATGGTATCTGAAATCAAGTGACTGGGTTGTTGGCAAGGTTGAAAGTCTATCTGAAAATGAGTTCGCTGATTCTGTAGATA GATATGGCAAGGAAACAGACAGAAATCAAGAGGATGCAATGGTTCTAGCTGATGAAAACCAATGCTTGTGCGTGTTGTGT GGTGAGCTATTTGAAGAGTTTTACTGTCAGGAAAATGGTGAGTGGATGTTCAAAGGGGCTGTTTATGTGCCTAACTCTGA TATCAATGATGATATGGGAATTAGAGATGCGAGTACAGGAGGGGGTCCCATCATTCATGCAAGATGCTTATCAGAGAACC CAGTTTCCAGTGTCCTGAACATGGAGCAGGATTAA
Protein sequence (LotjaGi5g1v0091600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSSRRPFDRSREPGLKRPRMMEEPERVAAAQNPSSRQFLPQRQQQVAASGISTLSSAARLRAAANSRDLESSDFGRGD GGGGYHPRPPPFQELVAQYKSALAELTFNSKPIITNLTIIAGENQAAEQAIAATVCANIIEVPSEQKLPSLYLLDSIVKN IGRGYVKYFAARLPEVFCKAYRHVDPAVHHSMRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGSSSTSATLRSDSQSQRP PPSIHVNPKYLERQRLQQSSRTKGVDDMSGAIANSNDDPEMPDRALGVKRPRADPSVSVHYHLENNQRAHRDAFNDSVRE KSISASYGGNEYGSDLSRNLGMGTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEASMILDARNQ PRQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEVEDNHHQSRNPFGANVDTEMS IESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHSDGFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLGQ LHSVGDESPSRESSLRQQSPPPVGKFHRSQLRDLQSGSFSSMTFQPSHKQQLGSSHTEVTAKTEKPHLSKVPLPRETEQP TTTRFETAAGKGGKLSNMPITNRLPTSRSLDTGNLPSILGVRPSQSSGSSPAGLIPPVSAIASPPSLGRPKDNSSALPKI PPRRAAQPPRTSALPPASSNLKSAAVQASSSANNALNPIANLLNSLVAKGLISAETETTAKVPSEMLTRLEDQSDSITTS SSLPGASVSGSAVPVPSTKDEVDDGAKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICGLKLK FQEQFDRHLEWHATREREHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQEDAMVLADENQCLCVLC GELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGPIIHARCLSENPVSSVLNMEQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 4 | 580 | 577 | 0.0 | – | |
| PANTHER | 4 | 580 | 577 | 0.0 | – | |
| MobiDBLite | 32 | 46 | 15 | - | – | |
| MobiDBLite | 67 | 91 | 25 | - | – | |
| Gene3D | 91 | 216 | 126 | 7.2E-41 | ||
| ProSiteProfiles | 91 | 219 | 129 | 35.566 | ||
| SMART | 94 | 216 | 123 | 7.7E-42 | ||
| SUPERFAMILY | 94 | 217 | 124 | 2.75E-37 | ||
| CDD | 96 | 212 | 117 | 7.11256E-53 | – | |
| Pfam | 147 | 200 | 54 | 9.0E-8 | ||
| MobiDBLite | 219 | 291 | 73 | - | – | |
| MobiDBLite | 219 | 243 | 25 | - | – | |
| MobiDBLite | 436 | 475 | 40 | - | – | |
| MobiDBLite | 452 | 466 | 15 | - | – | |
| MobiDBLite | 559 | 742 | 184 | - | – | |
| MobiDBLite | 563 | 584 | 22 | - | – | |
| PANTHER | 583 | 1018 | 436 | 0.0 | – | |
| PANTHER | 583 | 1018 | 436 | 0.0 | – | |
| MobiDBLite | 591 | 619 | 29 | - | – | |
| MobiDBLite | 659 | 693 | 35 | - | – | |
| MobiDBLite | 791 | 830 | 40 | - | – | |
| MobiDBLite | 791 | 814 | 24 | - | – | |
| ProSitePatterns | 872 | 892 | 21 | - | ||
| Coils | 1018 | 1024 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi5g1v0091600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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