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CID domain profile.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Vitis vinifera] gi|225438617|ref|XP_002276726.1| | 12 | ||
– | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Vitis vinifera] gi|225438617|ref|XP_002276726.1| | 13 | ||
– | PREDICTED: HUA2-like protein 3-like [Cicer arietinum] gi|502109744|ref|XP_004493717.1| | 8 | ||
– | Calcium homeostasis endoplasmic reticulum protein [Medicago truncatula] gi|357442977|ref|XP_003591766.1| | 9 | ||
– | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1A-like [Cicer arietinum] gi|502102707|ref|XP_004492159.1| | 12 | ||
– | PREDICTED: polyadenylation and cleavage factor homolog 11-like [Cicer arietinum] gi|502090897|ref|XP_004489376.1| | 14 | ||
– | PREDICTED: polyadenylation and cleavage factor homolog 11-like [Cicer arietinum] gi|502090897|ref|XP_004489376.1| | 14 | ||
– | PREDICTED: polyadenylation and cleavage factor homolog 11-like [Cicer arietinum] gi|502090897|ref|XP_004489376.1| | 14 | ||
– | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1A-like [Cicer arietinum] gi|502102707|ref|XP_004492159.1| | 12 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11 [Medicago truncatula] gi|357510921|ref|XP_003625749.1| | 13 | ||
– | Calcium homeostasis endoplasmic reticulum protein [Medicago truncatula] gi|357442977|ref|XP_003591766.1| | 12 | ||
– | PREDICTED: ENHANCER OF AG-4 protein 2-like, partial [Cicer arietinum] gi|502144948|ref|XP_004505806.1| | 16 | ||
– | PREDICTED: ENHANCER OF AG-4 protein 2-like, partial [Cicer arietinum] gi|502144948|ref|XP_004505806.1| | 15 | ||
– | PREDICTED: ENHANCER OF AG-4 protein 2-like, partial [Cicer arietinum] gi|502144948|ref|XP_004505806.1| | 17 | ||
– | PREDICTED: U2 snRNP-associated SURP motif-containing protein-like isoform X1 [Cicer arietinum] gi|502154212|ref|XP_004509622.1| | 26 | ||
– | PREDICTED: U2 snRNP-associated SURP motif-containing protein-like isoform X1 [Cicer arietinum] gi|502154212|ref|XP_004509622.1| | 26 | ||
– | PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Vitis vinifera] gi|225438617|ref|XP_002276726.1| | 12 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11 [Medicago truncatula] gi|357510921|ref|XP_003625749.1| | 7 | ||
– | PREDICTED: HUA2-like protein 3-like isoform X1 [Cicer arietinum] gi|502115541|ref|XP_004495229.1| | 16 | ||
– | Regulation of nuclear pre-mRNA domain-containing protein 1B; TAIR: AT3G26990.1 ENTH/VHS family protein; Swiss-Prot: sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 1B; TrEMBL-Plants: tr|G7L125|G7L125_MEDTR Regulation of nuclear pre-mRNA domain protein; Found in the gene: LotjaGi1g1v0628600 | 12 | ||
– | Regulation of nuclear pre-mRNA domain-containing protein 1B; TAIR: AT3G26990.1 ENTH/VHS family protein; Swiss-Prot: sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 1B; TrEMBL-Plants: tr|K7KBY0|K7KBY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0652000 | 13 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT2G36480.1 pre-mRNA cleavage complex 2 Pcf11-like protein; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A072U4Q6|A0A072U4Q6_MEDTR ENTH/VHS-like protein; Found in the gene: LotjaGi1g1v0679800 | 14 | ||
– | Tudor/PWWP/MBT domain-containing protein; TAIR: AT3G63070.1 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|F4IZM8|HUAL3_ARATH Protein HUA2-LIKE 3; TrEMBL-Plants: tr|I1JNS1|I1JNS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729800 | 19 | ||
– | Tudor/PWWP/MBT domain-containing protein; TAIR: AT3G63070.1 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|F4IZM8|HUAL3_ARATH Protein HUA2-LIKE 3; TrEMBL-Plants: tr|I1JNS1|I1JNS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729800 | 19 | ||
– | Tudor/PWWP/MBT domain-containing protein; TAIR: AT3G63070.1 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|F4IZM8|HUAL3_ARATH Protein HUA2-LIKE 3; TrEMBL-Plants: tr|I1JNS1|I1JNS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729800 | 19 | ||
– | Calcium homeostasis endoplasmic reticulum protein; TAIR: AT4G31200.1 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; Swiss-Prot: sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein; TrEMBL-Plants: tr|A0A1J7HFJ7|A0A1J7HFJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0742800 | 18 | ||
– | Calcium homeostasis endoplasmic reticulum protein; TAIR: AT4G31200.1 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; Swiss-Prot: sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein; TrEMBL-Plants: tr|A0A1J7HFJ7|A0A1J7HFJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0742800 | 18 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 | 13 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 | 13 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 | 13 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 | 13 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 | 13 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT4G04885.1 PCF11P-similar protein 4; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|A0A1J7HJ63|A0A1J7HJ63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457600 | 13 | ||
– | Hepatoma-derived growth factor-related protein 2; TAIR: AT5G23150.2 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|Q9XER9|HUA2_ARATH ENHANCER OF AG-4 protein 2; TrEMBL-Plants: tr|A0A151TMW5|A0A151TMW5_CAJCA Hepatoma-derived growth factor-related protein 2; Found in the gene: LotjaGi3g1v0528900_LC | 20 | ||
– | Tudor/PWWP/MBT domain-containing protein, putative isoform 2; TAIR: AT5G23150.1 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|Q9XER9|HUA2_ARATH ENHANCER OF AG-4 protein 2; TrEMBL-Plants: tr|A0A0R0HDU9|A0A0R0HDU9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0528900_LC | 11 | ||
– | U2 snRNP-associated SURP motif-containing protein; TAIR: AT5G25060.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9C5J3|RRC1_ARATH Protein RRC1; TrEMBL-Plants: tr|A0A0S3R3V4|A0A0S3R3V4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148600 | 31 | ||
– | U2 snRNP-associated SURP motif-containing protein; TAIR: AT5G25060.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9C5J3|RRC1_ARATH Protein RRC1; TrEMBL-Plants: tr|A0A0S3R3V4|A0A0S3R3V4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148600 | 31 | ||
– | U2 snRNP-associated SURP motif-containing protein; TAIR: AT5G25060.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9C5J3|RRC1_ARATH Protein RRC1; TrEMBL-Plants: tr|A0A0S3R3V4|A0A0S3R3V4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148600 | 31 | ||
– | U2 snRNP-associated SURP motif-containing protein; TAIR: AT5G25060.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9C5J3|RRC1_ARATH Protein RRC1; TrEMBL-Plants: tr|A0A0S3R3V4|A0A0S3R3V4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148600 | 31 | ||
– | Regulation of nuclear pre-mRNA domain-containing protein 1B; TAIR: AT5G65180.1 ENTH/VHS family protein; Swiss-Prot: sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 1B; TrEMBL-Plants: tr|A0A151RRS1|A0A151RRS1_CAJCA Regulation of nuclear pre-mRNA domain-containing protein 1B; Found in the gene: LotjaGi4g1v0401200 | 11 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT2G36480.1 pre-mRNA cleavage complex 2 Pcf11-like protein; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|K7LHS7|K7LHS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0091600 | 15 | ||
– | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT2G36480.1 pre-mRNA cleavage complex 2 Pcf11-like protein; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|K7LHS7|K7LHS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0091600 | 15 | ||
– | Tudor/PWWP/MBT domain-containing protein; TAIR: AT3G63070.1 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|F4IZM8|HUAL3_ARATH Protein HUA2-LIKE 3; TrEMBL-Plants: tr|I1JFC3|I1JFC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163800 | 19 | ||
– | Regulation of nuclear pre-mRNA domain-containing protein 1B; TAIR: AT5G10060.1 ENTH/VHS family protein; Swiss-Prot: sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein 1B; TrEMBL-Plants: tr|K7LRU4|K7LRU4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0084800 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 2.27 |