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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0091600 |
| Transcript ID | LotjaGi5g1v0091600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA cleavage complex 2 protein Pcf11; TAIR: AT2G36480.1 pre-mRNA cleavage complex 2 Pcf11-like protein; Swiss-Prot: sp|Q0WPF2|PCFS4_ARATH Polyadenylation and cleavage factor homolog 4; TrEMBL-Plants: tr|K7LHS7|K7LHS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0091600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:15998347..16006000) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGTGCAATTAAGCGTAGTGAAGATGAAATCCATCATATAAAAACGCCTCCTTAGTTACTTCTTGAGATACGTGACAA ACTAACTCGGCGTTCCTTGTCTGAAGAACGACCTCTGCTTTACTCTTCAACAGTTCCATCATCGAATTCTAACCTTTCTC TTTCTCTCTCTCTCTCTAACCCTTTCAATTTGGGGATTAGGGTTCCTTCTCCTTTCTCATTGTATCATATAGAATAGGGT TTAATTTTTTCCAATCTTGTATCATTTTCCCAATCAACGATGTTATTCTTACATTGTAATCTAGTTTTTATATGTTACTG TATCCAATTCGGTGTAAACTAGGATTAGGATTAGGGTTTTTGAACATTTGATTTTTGTGGGCATGGAGAGTAGCTCACGC AGACCATTCGATAGATCGAGAGAACCGGGTCTGAAGAGACCCAGAATGATGGAAGAACCAGAGCGTGTTGCTGCTGCTCA GAATCCAAGTTCTCGGCAGTTTCTTCCTCAGCGACAGCAACAAGTGGCGGCTTCTGGGATTTCAACCTTGTCATCTGCTG CAAGGTTGAGAGCTGCAGCTAACAGTAGAGACTTGGAAAGCAGTGATTTCGGTCGCGGCGACGGTGGTGGGGGTTACCAT CCACGGCCACCACCATTTCAGGAGCTTGTGGCTCAGTATAAGAGTGCCCTTGCTGAGCTTACGTTTAACTCGAAACCGAT AATTACCAATTTGACGATAATTGCAGGCGAGAATCAAGCTGCGGAGCAGGCCATTGCAGCTACTGTTTGTGCCAACATTA TAGAGGTGAACTTAGTTTATACTGTATTCATGTGTAGTTGATTGTCTGATCAATTGGGTAGTGATTCCTTTTGTTTTTTT GTTGTTGTTATGGACCTAATTGCTGATTGAATTGAATTGTTGTAAGTCATTTGGAATGATAAATCATTGTGGTCTTTCTG ATTGAAATGGTGTTGTTTCTTGTTATTCTGTGTGGTGTGTGGCAATTACTTTTTGAGTGAGAGAGAGAGCCATGGGGATT TTGTGTATTGCTTGTTTGCAATTAGTGGAATATGTTTGGTGTTGTAACTTGTAACAGTTATGGGACAGAGTTGCTATTGT CATGAGAAGAGATCTATTGTTTAGAAAGGACTTTCATGATTCATTCAATTCCATTACATGCAGCTCCTCAATGGAAAACA TGTGGATTGGCTTTGTGTTGTACGTTTTACCCTACCTAGAGATGAAGTTTCAACAGAAAAATGAAAATAAAAAGAAAAAA CTATGTAGCTTTACAAGCAAAATAATAGATGGTGGGGAGGGGGGGACTATCATTCTGCAATTGCAAAGATTATGTAAGTT TGGTAATCCATTTGGTACAGACAAGCGGCATCATTACAGAATGCTACTCCACAGTTCTCCTGGTTTTTTGTGGACTTTGT ATGCAGAGGGGAGTACGAATCATTGCAAACATTTAATTTTTACGGGCCAATGTTTCCCAATTATTGTTGCATTTCTCTTC TCTTTTTTTTTTGTAATAGACATTGTAATTGCACAGTATTTTTGCACTTGTGGAAGGTAGTTCTGTTTCATAGATAACAA GCATTAGCATCTTTCAAGTCTTACCTCTCAGGTTTGAGTCATGTACAGGAAAATACAATTTGGCCACATTTTTGGGGGGT TATTCGAGACAGAAAATTTGTATAGCCAAGATGAACAAAGACATTGTAGCTTGTATCATTTGGCTTTTGTGCTTGTGGAT TCACTTTGATTGAAGGGGCCACATGTAGCATGTAACTAAAGATAGCATCAGTAATTCATTTACGATCAATTGGATCAAAG AGCAGATGGAACTAGTCAGTGTTTGATATGATTTGGAAGATTGGATAGTCTTCATTTTGCAGCAATCAAGATTGTGACCA AGACATTTCATATTTGGTGATTTTTTTTCCTAAGGCTCTTTACATAAGTTGAACTTATTCCACGGAGTGCAAGATATGAT CAAAACTATCTACAAAAATGTGGAAGGTTTGCCCTGCATTTAATGTTAGTTTATGTGTTAGTTGCCTCCGTAGTATGAGA TGTAGGCTGTTTGAGGCAGCTAGAATAAGGAATGGAATGACCAATAATTTTGAACATATATGACATTAGCCAATTGCTGT TGAATATTTCTGGATTTTGATGTTTTTTTGCTGCTAATTTCTATGTGTGAGCTATATATTATTATTTTCTGTCATTTTCA TTATATCATATGTCAGGGTCTCTTATTTCTAGCTTTTTGATAACTAGTCTTTTTGTTGTATACAGAACGATCCTTTTTCA TTGAATTGTGTTAATGACTTTCCAGGTTCCGAGTGAACAAAAGCTGCCATCACTCTATCTCTTAGACAGTATAGTTAAGA ATATTGGGCGGGGTTATGTGAAATACTTTGCTGCCAGACTACCCGAGGTTGGATACTTATTCTTCTCTTAGCCTGTTAAT GTCCTTTATGTCTTTTTAGATGTACTTATGCATGTCTTTACTGTGGTCTGTGATGAATCCTTCAATTGTTCAGTTATGCA AAATGTACTAATGCATGTCTTTCCTGTGATTTGTTTTCTCATTTTACAAACCTGTTTTTAACTAGGTACTTGCTAATTAC TCCTTTTGTTTAGGTATTCTGCAAGGCATACCGACATGTTGATCCTGCTGTCCACCATAGTATGAGGCATCTTTTCGGAA CATGGAGAGGAGTCTTTCCTTCTCAGACCCTTCAGGCTATTGAGAAGGAACTGGGCTTCACACCTGCAGTCAATGGTTCA TCTTCCACATCTGCCACACTCAGGAGTGATTCACAGTCACAACGTCCACCTCCAAGTATCCATGTTAATCCCAAGTATCT TGAAAGACAGCGTCTTCAGCAGTCCAGCAGGGTAGGTGAAATGGTTGCACTTCAAAATTTTCTGTCTTATGAAACATTGA TATGATTTGAATGGATCAAGATATGACATTATTACAGAATACAGATTTATATTGGGATGAAAATCTTCATTCCTTTCATG ATGAAACCAGATGGGTAGATGTATGTTGTAATTTTTAAATCTTGTTGTTGCTTTTTGGGCCACCACAATATTCTTGCAAT CACTGTATTTTTTTGTTGGATTTTTCCAATGAACTGATTTATACTCCTTTTTTCTCCTGATTAATCATGAAATGTCCTTC TTTGTCTGTTGTTGTTTTATCTGATTGTTGACTTGTTGGATATCTAAGACAGCCCCAATTGCTTGGAGGCATACACTAGG AATTGCTCTTTTTGTTTCTATAGGTATTATCCACAGTATGCAGACCTATGATAAGTTATACGGCTATACCATTTGACATC CTGTCATGTTACTTTTGTTAGCCACATTCCTTTTGCTATCACATCACCAGTGCATAATTCTTTTGGCATGTACTTTTTCT TTCATGAAGACTAAAGGAGTTGATGATATGTCTGGAGCAATTGCAAACTCAAATGATGACCCAGAGATGCCTGATAGAGC TTTGGGTGTTAAACGACCAAGGGCGGATCCTAGTGTTAGTGTTCACTACCACTTAGAAGTAAAATTTCTTTTCCACTTAT GCTATTCTTTCTGTCAGTTGTTATATTTTAATGTTATAATCCACATTGCAGAATAATCAGCGCGCTCATAGAGATGCATT CAATGATTCTGTTCGGGAAAAGAGTATCAGTGCATCCTATGGAGGCAATGAATATGGTTCCGATCTTTCAAGGAATTTGG GCATGGGTACTGGCAGGACTGGTGGTAGGGTGGCCGAGTTAGGAAGTGACAAAAGTGGGTACAACAAAGCTGCTGGTGCT GGTGTTGCAGGGACCATATCTGGGCAAAGAAATGGTTTGAGTATCAAGAATAACTTTTTGAATACTGAAGCATCCATGAT TTTGGATGCACGTAATCAGCCAAGACAAAACATTAATAGCCTACAGAGAGGCGTAATGTCAAATAGCTGGAAACATTCTG AGGAAGAGGAGTTCATGTGGGATGAGATGAATGCTGGATTGACTGGTCACGATGCAGCCAGTGTCCCTAACAACTTGAGC AAAGATTCTTGGACTTCTGATGATGAGAATTTGGTAAGCTTGCCTGAATTTGATAACTTGGAAATTAGCTGATGCAGAAC AGAACCCGGGAAAGATATTAGAAACCAAAATTTTGATTATCAGATATATATCAGATTTAACTCCCTGTGATAATAGAATA GTTTTGTTAGGACACCCTTATTACAGACAACCCAAACCTAAGTCAAAAGACTTCAAAAATCCTAATCCCCAAGAGGAAAA AAATGTTCTATACCTTGGGATATCATATTCTGGAACTCTAACAGCTTGATCTTTTTTTTCCCCAAATTTCTAATATTTAA TATTTAAACCCTAAGGTTTTGTTTGGGAATTTTTAGGGGAAGGCTTTGAGGGGAAGGGGAAAGAGAGGGTGAAGGCAGGG TACGTGCCCTCCCTTTGTTTGTTAGTTCAAAATCCCATAAAATCCCCCAATTTGGGGTAACTTATATAAATAACTGAATT GGGGGTTTTAGAAATTCCCCAAATCTTTCCCCTCTTTTTAAAAACTCCCAAACATTGGGAGGCCTTCTCATACGCCTCCC CCTCCCCCGCCTCTCCCCTTCCCTCCCCTCCAAAACCCAACTCACAAACAAACCCTAAATCTCCAGTTACAAACACAAGT TCCTAAATTACAGATACAATAATCACCTCATTCTGCATAGTTAACATTATGTAGATTTATTGATTTTTTTTCTTGTTCAG GAGGTTGAAGATAATCACCACCAAAGCAGAAATCCCTTCGGGGCAAATGTTGATACAGAAATGTCCATTGAATCTCAAGC AACTGAAAGGAAACAATTACCTGCATTTCGGCCTCATCCATCACTATCATGGAAATTGCAGGAGCAGCACTCAATTGATG AGTTGAATCAGAAGCCAGGTCACTCAGATGGATTTGTGTCAACTCTTGGTGCCCTACCTACCAATACTAATTCTGCTGCT ACTAGGATGGGGAATCGGTCTTTACTGCCAAAGGCAACAATTGGCTTAGCAGGAAACCTGGGACAACTTCATTCTGTGGG AGATGAATCCCCTTCGAGAGAGTCAAGTTTGCGACAACAGTCTCCACCACCAGTAAGTGTGCACCTCCCTCATCTAATGC AAAATTTGGCTGAGCAAGACCATCCCCAGACTCATAAAGTATCTAAATTTTCGGGAGGTCTGCACAGCCAAAATATTAAA GATATTTCACCTGCCCTTCCTCCTAATATTCAGGTTGGGAAATTCCATAGATCACAGCTAAGAGACTTGCAGAGTGGTTC ATTCTCTTCAATGACGTTTCAGCCAAGTCACAAGCAGCAACTGGGCTCTTCGCACACTGAAGTTACTGCTAAGACTGAGA AGCCACACCTGTCTAAAGTTCCTCTGCCTCGAGAAACAGAGCAACCAACCACAACTCGTTTTGAAACTGCAGCTGGGAAG GGCGGAAAGTTATCCAACATGCCAATTACTAATAGGCTTCCTACTTCAAGAAGCTTGGATACAGGGAATCTTCCATCTAT ATTAGGAGTTCGGCCTTCCCAGTCAAGTGGTTCTTCCCCTGCCGGATTAATTCCTCCAGTGTCTGCAATTGCATCACCTC CCTCATTAGGTCGTCCCAAAGATAATTCCTCTGCTCTGCCAAAAATACCTCCAAGAAGGGCTGCACAGCCACCAAGGACA TCTGCTCTACCACCAGCTTCCTCTAATCTCAAAAGTGCTGCAGTCCAGGCATCAAGTTCTGCCAATAATGCCTTAAATCC AATTGCAAACCTTTTAAACTCATTAGTTGCAAAGGGTTTGATCTCTGCAGAAACCGAGACAACAGCTAAGGTGCCATCTG AGATGCTGACTCGATTGGAAGATCAAAGTGACAGCATTACCACCAGTAGCTCTTTGCCTGGTGCTTCAGTGTCTGGTTCT GCAGTCCCAGTCCCTTCTACCAAAGATGAAGTAGACGATGGTGCAAAAACACCTATATCCTTATCTGAATCAACCAGCAC AGAAATCAGAAATTTCATTGGCTTTGAGTTTAAGCCTGATGTAATCCGAGAGTTGCATCCATCTGTAATTAGTGGATTAT TTGATGATTTTCCACATCATTGCAGCATTTGTGGCCTTAAGCTTAAATTCCAAGAACAGTTCGATAGACACTTGGAGTGG CATGCCACAAGAGAAAGAGAACACAGTGGTCTAATTAAGGCATCGAGATGGTATCTGAAATCAAGTGACTGGGTTGTTGG CAAGGTTGAAAGTCTATCTGAAAATGAGTTCGCTGATTCTGTAGATAGATATGGCAAGGAAACAGACAGAAATCAAGAGG ATGCAATGGTTCTAGCTGATGAAAACCAATGCTTGTGCGTGTTGTGTGGTGAGCTATTTGAAGAGTTTTACTGTCAGGAA AATGGTGAGTGGATGTTCAAAGGGGCTGTTTATGTGCCTAACTCTGATATCAATGATGATATGGGAATTAGAGATGCGAG TACAGGAGGGGGTCCCATCATTCATGCAAGATGCTTATCAGAGAACCCAGTTTCCAGTGTCCTGAACATGGTAAGGCTTA TTATTTGATTTAAATGGACAGAATGAAGGCTTTCTAGTTTGGTGTTCAAAGCTCCAATCTATCTATTTGAAAGGTTGGGT GTGTTTGAAATATTGGATGGCTAGGCTCTCATATATTTAGGGTTGAAAGATGAGCATAAAAAATTAAACACACCCCGTTG TTACCCGAGCAATGCAAATGGTGGGCCTAGGTCCTCTGTTTATCAAGTTAAAATATGCTTACATCAAATTGAATGGGCTT TATTACTGGTAATTGATCTGACCCTGTTATATTTTGCAGGAGCAGGATTAAAGCAAGTTTAGACATTGGAGCTCTGATGT AGCAAAAATTAATAAGCTGAGGGAACCCAGGTTTACTTTGAATTTACCTATTCTTGATGGCTCTTCATACTAAATTTATT TACCAGTTGGTTTCTAGAGCTGTCAAGCAATTTTTTGCTCTCTTTTTTTTTTCTTTTTTGTTCTGTTTTGTTTTTGTTTT TAAACTCAGGAAGAGGTGCTAATTCCTTGGTGTTCAAAGTATATAAATGCGATAGTTTTTGCGGCTCAACTTGCTCATTG ATGTGTTGTGTATGTTCATTTTACCTGATGAAGCGGATTTATGCTTTTTTAAACAGCATCTTCTGGTTGTAATGTGAGGC AGAGCGTTAAGGTCATAGTTGTTGCAAATGTCTACTGGCGTTCTCTTATCACTAGAATTGCTACTATTCTGGTTACCTTT TTGCGTTGTCCTTTTATTCCCCTTTACATGGGACTTGGTATTGCAGTATTGTTAACTGGACATTACTTTCATAATTTCCA GAATTTCAGTTTTATAGACAATAATGGATATGTAATTTGTTTTACTTTTCCTGCTGCTGATCGATGCTGAGCCATTGTTT AATATTGATAAGAGTAAAGTACACTCACCCCCTTCAAGGTTTGTTAGAATTACACTCCACCCCATTCTTATCTAAAATCT ACACCCCACCCCATTTTATATAGAGGCAAATTTAGTGACGAAAAATATTTTTCA
CDS sequence (LotjaGi5g1v0091600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTAGCTCACGCAGACCATTCGATAGATCGAGAGAACCGGGTCTGAAGAGACCCAGAATGATGGAAGAACCAGA GCGTGTTGCTGCTGCTCAGAATCCAAGTTCTCGGCAGTTTCTTCCTCAGCGACAGCAACAAGTGGCGGCTTCTGGGATTT CAACCTTGTCATCTGCTGCAAGGTTGAGAGCTGCAGCTAACAGTAGAGACTTGGAAAGCAGTGATTTCGGTCGCGGCGAC GGTGGTGGGGGTTACCATCCACGGCCACCACCATTTCAGGAGCTTGTGGCTCAGTATAAGAGTGCCCTTGCTGAGCTTAC GTTTAACTCGAAACCGATAATTACCAATTTGACGATAATTGCAGGCGAGAATCAAGCTGCGGAGCAGGCCATTGCAGCTA CTGTTTGTGCCAACATTATAGAGGTTCCGAGTGAACAAAAGCTGCCATCACTCTATCTCTTAGACAGTATAGTTAAGAAT ATTGGGCGGGGTTATGTGAAATACTTTGCTGCCAGACTACCCGAGGTATTCTGCAAGGCATACCGACATGTTGATCCTGC TGTCCACCATAGTATGAGGCATCTTTTCGGAACATGGAGAGGAGTCTTTCCTTCTCAGACCCTTCAGGCTATTGAGAAGG AACTGGGCTTCACACCTGCAGTCAATGGTTCATCTTCCACATCTGCCACACTCAGGAGTGATTCACAGTCACAACGTCCA CCTCCAAGTATCCATGTTAATCCCAAGTATCTTGAAAGACAGCGTCTTCAGCAGTCCAGCAGGACTAAAGGAGTTGATGA TATGTCTGGAGCAATTGCAAACTCAAATGATGACCCAGAGATGCCTGATAGAGCTTTGGGTGTTAAACGACCAAGGGCGG ATCCTAGTAATAATCAGCGCGCTCATAGAGATGCATTCAATGATTCTGTTCGGGAAAAGAGTATCAGTGCATCCTATGGA GGCAATGAATATGGTTCCGATCTTTCAAGGAATTTGGGCATGGGTACTGGCAGGACTGGTGGTAGGGTGGCCGAGTTAGG AAGTGACAAAAGTGGGTACAACAAAGCTGCTGGTGCTGGTGTTGCAGGGACCATATCTGGGCAAAGAAATGGTTTGAGTA TCAAGAATAACTTTTTGAATACTGAAGCATCCATGATTTTGGATGCACGTAATCAGCCAAGACAAAACATTAATAGCCTA CAGAGAGGCGTAATGTCAAATAGCTGGAAACATTCTGAGGAAGAGGAGTTCATGTGGGATGAGATGAATGCTGGATTGAC TGGTCACGATGCAGCCAGTGTCCCTAACAACTTGAGCAAAGATTCTTGGACTTCTGATGATGAGAATTTGGAGGTTGAAG ATAATCACCACCAAAGCAGAAATCCCTTCGGGGCAAATGTTGATACAGAAATGTCCATTGAATCTCAAGCAACTGAAAGG AAACAATTACCTGCATTTCGGCCTCATCCATCACTATCATGGAAATTGCAGGAGCAGCACTCAATTGATGAGTTGAATCA GAAGCCAGGTCACTCAGATGGATTTGTGTCAACTCTTGGTGCCCTACCTACCAATACTAATTCTGCTGCTACTAGGATGG GGAATCGGTCTTTACTGCCAAAGGCAACAATTGGCTTAGCAGGAAACCTGGGACAACTTCATTCTGTGGGAGATGAATCC CCTTCGAGAGAGTCAAGTTTGCGACAACAGTCTCCACCACCAGTTGGGAAATTCCATAGATCACAGCTAAGAGACTTGCA GAGTGGTTCATTCTCTTCAATGACGTTTCAGCCAAGTCACAAGCAGCAACTGGGCTCTTCGCACACTGAAGTTACTGCTA AGACTGAGAAGCCACACCTGTCTAAAGTTCCTCTGCCTCGAGAAACAGAGCAACCAACCACAACTCGTTTTGAAACTGCA GCTGGGAAGGGCGGAAAGTTATCCAACATGCCAATTACTAATAGGCTTCCTACTTCAAGAAGCTTGGATACAGGGAATCT TCCATCTATATTAGGAGTTCGGCCTTCCCAGTCAAGTGGTTCTTCCCCTGCCGGATTAATTCCTCCAGTGTCTGCAATTG CATCACCTCCCTCATTAGGTCGTCCCAAAGATAATTCCTCTGCTCTGCCAAAAATACCTCCAAGAAGGGCTGCACAGCCA CCAAGGACATCTGCTCTACCACCAGCTTCCTCTAATCTCAAAAGTGCTGCAGTCCAGGCATCAAGTTCTGCCAATAATGC CTTAAATCCAATTGCAAACCTTTTAAACTCATTAGTTGCAAAGGGTTTGATCTCTGCAGAAACCGAGACAACAGCTAAGG TGCCATCTGAGATGCTGACTCGATTGGAAGATCAAAGTGACAGCATTACCACCAGTAGCTCTTTGCCTGGTGCTTCAGTG TCTGGTTCTGCAGTCCCAGTCCCTTCTACCAAAGATGAAGTAGACGATGGTGCAAAAACACCTATATCCTTATCTGAATC AACCAGCACAGAAATCAGAAATTTCATTGGCTTTGAGTTTAAGCCTGATGTAATCCGAGAGTTGCATCCATCTGTAATTA GTGGATTATTTGATGATTTTCCACATCATTGCAGCATTTGTGGCCTTAAGCTTAAATTCCAAGAACAGTTCGATAGACAC TTGGAGTGGCATGCCACAAGAGAAAGAGAACACAGTGGTCTAATTAAGGCATCGAGATGGTATCTGAAATCAAGTGACTG GGTTGTTGGCAAGGTTGAAAGTCTATCTGAAAATGAGTTCGCTGATTCTGTAGATAGATATGGCAAGGAAACAGACAGAA ATCAAGAGGATGCAATGGTTCTAGCTGATGAAAACCAATGCTTGTGCGTGTTGTGTGGTGAGCTATTTGAAGAGTTTTAC TGTCAGGAAAATGGTGAGTGGATGTTCAAAGGGGCTGTTTATGTGCCTAACTCTGATATCAATGATGATATGGGAATTAG AGATGCGAGTACAGGAGGGGGTCCCATCATTCATGCAAGATGCTTATCAGAGAACCCAGTTTCCAGTGTCCTGAACATGG AGCAGGATTAA
Protein sequence (LotjaGi5g1v0091600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSSRRPFDRSREPGLKRPRMMEEPERVAAAQNPSSRQFLPQRQQQVAASGISTLSSAARLRAAANSRDLESSDFGRGD GGGGYHPRPPPFQELVAQYKSALAELTFNSKPIITNLTIIAGENQAAEQAIAATVCANIIEVPSEQKLPSLYLLDSIVKN IGRGYVKYFAARLPEVFCKAYRHVDPAVHHSMRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGSSSTSATLRSDSQSQRP PPSIHVNPKYLERQRLQQSSRTKGVDDMSGAIANSNDDPEMPDRALGVKRPRADPSNNQRAHRDAFNDSVREKSISASYG GNEYGSDLSRNLGMGTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEASMILDARNQPRQNINSL QRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEVEDNHHQSRNPFGANVDTEMSIESQATER KQLPAFRPHPSLSWKLQEQHSIDELNQKPGHSDGFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLGQLHSVGDES PSRESSLRQQSPPPVGKFHRSQLRDLQSGSFSSMTFQPSHKQQLGSSHTEVTAKTEKPHLSKVPLPRETEQPTTTRFETA AGKGGKLSNMPITNRLPTSRSLDTGNLPSILGVRPSQSSGSSPAGLIPPVSAIASPPSLGRPKDNSSALPKIPPRRAAQP PRTSALPPASSNLKSAAVQASSSANNALNPIANLLNSLVAKGLISAETETTAKVPSEMLTRLEDQSDSITTSSSLPGASV SGSAVPVPSTKDEVDDGAKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICGLKLKFQEQFDRH LEWHATREREHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQEDAMVLADENQCLCVLCGELFEEFY CQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGPIIHARCLSENPVSSVLNMEQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 4 | 573 | 570 | 0.0 | – | |
| PANTHER | 4 | 573 | 570 | 0.0 | – | |
| MobiDBLite | 32 | 46 | 15 | - | – | |
| MobiDBLite | 67 | 91 | 25 | - | – | |
| ProSiteProfiles | 91 | 219 | 129 | 35.566 | ||
| Gene3D | 91 | 216 | 126 | 7.1E-41 | ||
| SUPERFAMILY | 94 | 217 | 124 | 2.75E-37 | ||
| SMART | 94 | 216 | 123 | 7.7E-42 | ||
| CDD | 96 | 212 | 117 | 6.99739E-53 | – | |
| Pfam | 147 | 200 | 54 | 8.9E-8 | ||
| MobiDBLite | 219 | 305 | 87 | - | – | |
| MobiDBLite | 219 | 243 | 25 | - | – | |
| MobiDBLite | 282 | 305 | 24 | - | – | |
| MobiDBLite | 428 | 467 | 40 | - | – | |
| MobiDBLite | 444 | 458 | 15 | - | – | |
| MobiDBLite | 551 | 734 | 184 | - | – | |
| MobiDBLite | 555 | 576 | 22 | - | – | |
| PANTHER | 575 | 1010 | 436 | 0.0 | – | |
| PANTHER | 575 | 1010 | 436 | 0.0 | – | |
| MobiDBLite | 583 | 611 | 29 | - | – | |
| MobiDBLite | 651 | 685 | 35 | - | – | |
| MobiDBLite | 783 | 806 | 24 | - | – | |
| MobiDBLite | 783 | 823 | 41 | - | – | |
| ProSitePatterns | 864 | 884 | 21 | - | ||
| Coils | 1011 | 1016 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi5g1v0091600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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