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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0114700 |
| Transcript ID | LotjaGi5g1v0114700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi5g1v0114700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:23382537..23390980) extracted from Lotus japonicus Gifu genome v1.2.
ATTTAAAACTGGTTTTTGATCCAAATCCGGTTTCTAACTAGTGCTGAAAAATATTCGGTTTAAAATTGGTTTTTAATCAT ATATCCAATTTTAAAACCAATTTCAAAACTAGTTTGAGTGTTTAAACTGGATGTTGGATGACGGATGAAAAATTCACCGC TTCATGCCATGAAAGTTCTTCAACCATGTTGAGGAATTTCGATTCACCACTGCGTCATACAGCACCGTCGCAGGAGGGCC CAACTTCGTTCACTCCCAGCCGATCTACAGTGCCGCCGCTTGTAGTCTCGCCGGAGCTGCCACGGTGGTTCTGAGTGGGG CTAAGTTGCTATGACTATTGTCCATGTGCAGAATATTTTTGGAACTACGGTCAGTGACTCACTTTAGACTTACAGCACAT GTCACAGTTGAAAAGCTCTTAAGTGCTAGCTTCCAAATAAACTTGTCATGATCTTGGGTCAATGCTATATTCACGCGTAC CAATAATTCTAATGTCTAGCACTCCAACTTTACAAAATGGTGAGACTTTTCTATCCATTAATTTCCAACCCAACATTTAT GATTTACCTACCCACTATTTCATCATTTCTAAACAGATTTTCCTTGCACTCTTGCAGCATCTTCAAAGTAATAGTTGTTA GCCTTAGCTTTTGCTATGGATTGCAAGAGAATCCAAAGCAGCTCTTCCCCTCAGATGAAATGGAAATATGACCTGTTTGT GAGTTTCAGAGGTGAAGACACACGAAACAACTTCACTGATCATCTTTTTGGTGCTTTCCAAAGAAAAGGTTTTGTTACTT TTAGGGATGACTCTAAGCTCAGGAAAGGGGAACATATATCCACAGAGCTTCTACAAGCAATTGAAGGATCTCGAATTTTG ATTGTGGTCTTCTCAAAAAACTATGCTTCTTCCACTTGGTGCTTGCAAGAACTGGCAAAGATTTCTGAGTGTATTGAAGT ACCAGGACAAACTGTGCTGCCTATTTTCTATGATGTAAGTCCATCTGAGGTGCGGAAACAAAGCAGGAATTATGAAAAAG CTTTTGTGGAGCATGAAGGAAGATTTAAACAACATTTAGTGATAGTTCAAAGATGGAGGGATGCTCTAGCACAGGTAGCA AATCTCTCTGGCTGGGATGTAAGGGACAGGTAAGTAATCTTTCAATTCGCAGCAAGTTGATCAACACTTTAAGGGGCACC AACATAACTTCTTCAATGGTTTCATTGAACTATTTTTATTTAGGATTTCATAGAACAATTTTAATTAATTACAGAAGTCT TTTTGTGGTATCCTATATATATATCAGTGTTGTTAATCGTTGAATGACAAAAGTTCGCTATTTCCAACCGTTATAGCGGA ATAGGGGTGAGTTCTCAGCGCTATGCTATAGCGCCGCTATAACCGCTATTCGACAACACTGATATATATTATGATTTATT AATGACAACTTTTTGGCTTTAATGGAAAAACAAACTGTAGAAAGAATCTTAATAAGTAAATTAATGTTTTTTTGTTCTTT CATATATGTTTGTAGTTTTTGTTTTGGGTTTTCATTTAATGATGATTTCATGTGTCTATCCTGTGGTCCTTAAGGCCACA ATATGCAGAGATTGGAAAAATTGTTCGAGAGGTAGCATGCACATTAGGTCATAATCTTTCAACTCTACCAGAAGATATAG TTGGTTTGGACTCACGGGTGGAAGAATTAGAAAAGCTTCTGGATTTGGCCTCAGATGATGTTCGAGTTGTAGGGATTGGT GGCATGGGTGGAATAGGAAAGACAACTTTTGCTACTGCTGTGTATGACAGAATCTCTAATCAATTTGATGCATCATGTTT TATTGACGATGTAAGCAAAATTTATGCAAACTGTGGTCCCATTGGGGCACAAAAGCAACTTCTTTGTCAAATTCTAAATG AAGAAAATCTTCATGTATGGAATACTTGTAAGGCAAATAATTTGATTCGAAATAGGCTTTGTCAAACAAAGGTCCTTATA GTTCTTGATAATGTTGATCAAGTTGAACAATTGAATAAGTTGGGTATTGAACGGGAATGGCTAGGCTCAGGGAGTAGAAT CATCATAATTTCTAGAGATGAGCATGTCTTGAGAGCATATAAAGTGGATGAAGTTTACAAGGTTCAACTGTTGAATTATC ATAATGCTCATCAATTGTTTTGTATAAAAGCTTTTGAATGTGATGATATAATGAGGGATTATATGGGATTGATAGATGAT GTACTAACGGCCTCCCATTAGCAATTAAAGTATTGGGTTCCTTTTTGTTTGGTCGAGATGTGTCTGAATGGAGAAATGCA CTGGTCAGACTAAGAGAAAATCCAAGAAAAGATATTATGGATGTGCTTCGAATTAGTTTCGATGCATTGGAAAACACGGA AAAAGAAGTATTCTTAGATATCGCTTGTTGCTTTTATGATGAACGGGAGGAATATCTGAAGGAAGTTCTAGATTTTCGTG GATTTTTTCCTGAAGTTGGTTTAAGAGTTCTCATTGATAAATCACTCATAAGTAGTGAGAAGGGGCTTATTCGAATGCAT GAATTGTTGAGAGAGCTAGGAAGGAGCATTGTTCGAGAAAAATCACCCAAAGAACCAAGACAGTGGAGCCGGTTGTGGGA CTACAAGGATCTGCACAATGTTATGTTAGAAAATATGGTAGATAGTTTTTAATTGTAAGATCTTAAGGTTCCATTTTTAT AGAATTGATGGACAATCAAAAGATTTAACATTTCCTTTTTTCTCTGCAATGTGTTAGGAAGCAGAAAATCTTGAAGTCAT AATCCTGCAAAGGTATCCACCCAAGATTCCAGAAACAACAATTAGGGCTGATGGTCTTTCAAAAATGAGTCACCTTAAGG TGCTTGAGCTTTGGAATATGAATTTTTCAGGAAGCCTCAATAATCTTTCTAATGAATTAGGATATCTTTCTTGGGAAAAA TATCCTTTCACATGTTTGCCATCAAGATTTCAGCCTCATAAACTGGTTAAATTGGTCTTGCCTCACAGCAGTATCAAACA GCTATGGGAAGACTCGAAGGTACTGCAAATTATTTTTCTTTTTCTCAACTTGGTTTTTCTTTTAATGAACAAATAAAATG ATAAATTGTCTTTTCTTTACGATTTTTCTGAGTTAATCTTGTCTCCTACTATTTCCCTTCACTGCAGCCTCTGCACAATT TGACACATATTGATCTCTCTCACTCGAAGAATCTTACTAAAATGCCAGATTTTGGAGAGGTCCCAAATCTTGAGATACTA GATCTTGAAGGATGTATAAAACTTGCGCAGATCGATCCATCAATTGGCACTTTGAAAAAGCTTATTGTTTTGAACTTGAA AAATTGTAAAAGTCTAATCGGTATTCCCAATAGCATTTTTGGTCTCAATTCTCTTGAAGATCTAAACCTCTCTGGCTGCT CGAAATTACTTAAGAATAAGCTGATAGAGAAACCAAAGGATGCAAAACATTTGAAGAAGCTTGAAATATATGAAAGTATT ACCCAACGACAGTCAACATCATCTATCTACAAAATTCTAAAGTTGCCTTTCCATTCACGAAGACATCAAGATTCAGCTGG TTTATTGTTGCTGCCTTATTTACCTCGTTTCCCATGTTTGCAACATCTTGACCTAAGCTTCTGCAATCTACTTCAGATTC CCTATGCTATTGGGTTGTTACATTCTTTAGAAAGCTTAAATTTAGCAGGAAACAATTTTGTTAAACTACCTTCTAGCATC AGGGAACTTTCCAAGCTTAAAATTTTGAACCTGGAGCACTGTAAGCAACTAGAATACTTGCCTGAGCTCCCATCAATAAC TCTCTTGCCAATACGAAGCGAAACATGTTTTGGTAGATATTACGCAGGACTTTATATTTTTGACTGTCCTAAATTGTGTG AGATGGATCGCTGTAATAGCATGGCTCTTTCTTGGATGATCCAAATCCTGAAGGTGCTTACTCCATCGTTCCTTTCTCTG TTTCTCTGTTTCTCTCTTTTCTGTGCAAGTAAACTAACACATAACTTATTTTTCTGGTACCAGGTGCACATGCAACCCTC TTTCTCCCATGGTGGATGTGGATGGAATTGGCAACCATGACCGAGCATCCCCAAGGTTTGCATTTGGAGGTGAAAGAGTG CGGGTATCGTTGGGTATTTAAGGAGGATCTGGAACAATTAAACCCTGAAATGATGTATAGTGGAAAATCATCAGCTTGGA AGCACAAGTTCATAACAGATGACTAGTTGTGCTGTATCATTGAGCTGATTACTGAAAAACATAGCAATTTTACTTGGCCA CACTTTTTCAGCAGAAATATAATCCATTTGAGGTGAGACTTAATACAGCAAAGCACTATGAATGTTATACAATTATAATA ATTCTTAAACACTCTATTATTATGTTAAAGGCTGATGATATGGTGTTTTGTTTTTTCTTTTCTCTTTGCAGGCTAGAGTG AATTCTTACTGAGAACATTGTTCGAGTTATGATTAGCATATAGGGCCTTGGATTGTCTTGAATGATCTATAACTAGTTGC CAAGATTTCAAGGGAAAAAGGTACGTACTCAAGTTTTGCAATAGTGTAGTTGAAGATTTGAAGTGGTTATCTAGCTGCTT TGATCATTTTATGGGAGTAAATTATTTGGTATTCCATTCGCAATTTTTAAACAAACTATGAAAGGGAAATATATGACTTC AGTACTTTAGTAGTAAAATAGATGATAATCTTATATACCATATGAGATACCTTTACAATCTATTCTCTACTGAAAAGAAG CTACAACTTGAGTTTTGTTTGCTAACTTACAAGAATATTTGTATACCATAATGTGTGAGTGTCTTTATATTTGCGGTACC AGTTTAGCACATTCACCTTCTGTCTTAAGCTACGTACCTGTTTAACACAAAAATGATTACCATTTGTCTCAAACCAGAAC ACTATCATAGACCCCCAAAATTTTCATCACCCATTACATGGAGATTTTGGAGGAGGTTGGAACATCTAACTTGAAAACAT CACCAGACAACATAATAAAAGTAGACATTTACAGCTTAAAAATGTTTTTATACGGAACTCAAAGAAGAGACTTACGATAA ATTGTGCAATAGAATTTCAAAAAGAAATAATTTTACTTTGGTAAAAGTGACAAGAAAAAAGACTTGAGGTTTGTACTGGA ACCTGGGAGGCGTATTGAGTCTACTCAATTCCTTGATACCATCTATGGATCTATGGGGAGCCTCTTCTTTGTTACTAGTA GGACCTATTCTACTAGAGCTTCCCATCACCACTTGGAAGGGATGGCTTGCATGATTCAAGGCTGATTCAGTAACTCACTG TGTGTTTGGGACTAAATATACATTGCAGCAAAATCTATTCCAGGCATTGTTACTGGGTATTGAGCTAGTAGGTTTTCCTG TTTTTTACGACTCTTAAATCACCTAATAGATTTGAATCATTTGAAGGTGCTTTTCCAGAAGGATTCAAATAACTGGTTCA AGGATGAGGGGTTGTGCATGTGGGCTGGGTATACCTTATATTAATTATGGTTCTTTCTTCTTTACCCATAGTGGATGTGG ATCTTTACTGAAGGCACGTGTTAAATAGGTATCAAAGGTGTTTTGACCTAACATAGTTGATCAAATTATCAAAGCAAGAA TGACAAGCAACATCTTAAAAGTTGAAGTGGAGAAAGCTGAAAAAGATGGACAAAGGAGTGCCTCAAAGCACTGAAATACT ATGATGGACAATGAAAGTGAGGTTGGAGAAATCATGCTACGTTGAAAAGCCTTTTTTATGCCAGTGGGCGATAATAACAC TAAAAAGTAAAATCTCAGATAGAAGCTAACATAGAAGAGGTGAGAAAGATATTTCACTTAATATTTCAATCTCAGAATTG ATATTGAATTGGTTATACTTCATCCTATATATAGGCACCATCTTACAATAAAATATTGAAGTCTTAAGGGAGAAGAACTC TAATGCATTCCAACTCTTACTACAAGAGTTCTAGTCAAACCTAAATAATAAAATTCTACGTTGACAAGTAGTATCTGTAT ACTTACTCTCGTTCCCAATAGCTAATTTATACGTGGGTATGATAATATTTTGAATTTTATGTTACTACAAGTAAAAATGG TTTGTATTCTTTAAGAATTTTATACAATAATGAAATCTATTTCACACATTGATATACTTTTATTCATACTAGTATTTTGT AATTATATTTTTTGGCAGAGTTTTTATAATTATAACTTTGACCAACTCATTCGTCTTTTTATTAAAATATGATAATAAAA TTGGATAGTAAATATAACTTGAGACACTTGATGTTGATGTTATTAGTTTTCTTTTTATGCTTGCAATTATCTATATATCT AGGTTCATAGTTGTTGCTTCATATTTAGACAGAGTTATCATACTATATATTATCTCATGGTTTTGTTATGTTGGTAGAGA ACAAATGAAAATGGAATCAGATGGTGCTAGGCTGAGTGCACAACGCTGAATGCAATGGTGCAGTGAATGTCCACGTCGGA GCACACAGGGACCTGCAAAAGGAACTCCGACGCTCAATTCAGTTCAAGATCAGACACAGATAAAATCAAAGTCTTAGAAG AGGAATAAGAGAGAAAATGAGTTGTGCGTATAGCTTAAAGTACAATCTAACCTATTTATAGTAGTTGTGTGATCAACTGT GTGGCTGGGTACTGTTTGGCAGAGCATGTTGTGGCCGACCATCTGTGGTTGACCATGTTGTGGCCGACCATGAGTATTTG TGCTGACCATAACATGTAGTTATTTTTTGTTTTGTATGATTAATAAGGCTGGTGGATCACCTTTGAGTTGCAAAGCATCA CGACAATAGGATTGCTTCCAAATCCAATTTAATGTCAAGAGGAATAACACTCGAAGATGGGGGGATTTGTATGGTGGCTT GGACATATGAAGCTAAAATTATAGCTATTCAGACTGCATTGTTGTTCTGCCATCAGTTCAGGCTAGAGACAAAATGCAGT ATACACTGTTACTGATTGGAGGAGGGTGGCGATTTTTCTGCAGCTGCTATAGCCTTGTTGTTCGTGTCCTGGAAAGTTAT GTGGTGCCTCTATTGATTTGCTAGTTGCTGCTGCTAATGTGCTCTATTTGGTGATTTACATAATTTAAGTCGTTGATGTA TCAAGTTGGATACTTAGTGGGATAAGGCTTTTGTTGTTGTTATTATTGTTGGTGATGTATCAAGATGGAGAGTTTGAACT TCACTGAATAATTGGTGTATTGGGGCAGTTATTTGAAGTGATTCTAAGGGTAGTTGATTGACCCCTTCTGATGTAAATGA TGTATATGAGTGGGGTTTTTTGTTATCACTCATCTCATTAGAGGGTTGTTCTCATGGCTCCACAGTTAATCTAATAAGAT GTTTTGCCTTCAAAAAAAAAAAAATAAAGAAAGTAAGCCAATGACTTAGTGCAATTATATGATGATCAAAATGGGAAGAA GAAAATAGAGGTGCTTGAATTTATTGCTGTTGATCACCCTGGTCCTAGAAGGGTTCCAAAGGCTGCAGAAGGCAGAGAAA TTAGCAACAGGATGGCCGACATGAGTTTCTTCCGTTGCTGGTAAAGCTATCAAAGAATTTATACCAGAGTGCAAAACTGC AAATATCTGTGAGAGTTCACATTAACTACTGTCTTCATTTCCACTTGCCAAAATTCTTAGTATGATGCAATGGTTAAATT ACTGATGAGCAAGTATTTAAACCTGGTTGCTGGAAAGTTACTTAATAAGGGTTTGGAGTTCTATAAATGGGATGGTGACT TTCCCAGTTGTTGTGGAATGTGAGAGACAAGTTGAATAGAGTTGTTTAATTAAGCTTCTTGAACATGCTTAAGATAAAAT GATAAATAGGTTGATTTATATTGCTACTTCATCTCTAAGGTAGCACAAGATAAAATGATGACTATCAAATATCTATAAAG ATAGCTTAACCACTCTTCTTTTGGTGTAGACACCAAAATTGTGAAGAGAAGAAACTCAAGAAAATAATAAATGTGATATG TGATGTGACATGAAAGAGAGAGATAAATAGAAGAAAAAGGTGTGTATATGTGTTGTTACTGTTTTGTGGTACACAAATCA TTACTGATCAAATATTTTGTGTTAGAGCTATGAGTATATCTTTCACTTTCAGTATTTCTTTGTTGTTTTATCAGGAATGG ACTTGGGAAGAGAAGAATCACTGTCTGGAAGTAGAAAAATCATTCAAGTTCTGAAGAGAGATTTTGTGACTGATTGACTT ATCTATGCAAATTATGTGTATTTAGGTACTTTGCTATCTGCGTAATTATGGGTATTGAAGTGCATTTTTATTTTCATTTT CAAAGCTTAAAGGGATGATAGAACTAATGTTGTATGGAAGCAGC
CDS sequence (LotjaGi5g1v0114700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTGCAAGAGAATCCAAAGCAGCTCTTCCCCTCAGATGAAATGGAAATATGACCTGTTTGTGAGTTTCAGAGGTGA AGACACACGAAACAACTTCACTGATCATCTTTTTGGTGCTTTCCAAAGAAAAGGTTTTGTTACTTTTAGGGATGACTCTA AGCTCAGGAAAGGGGAACATATATCCACAGAGCTTCTACAAGCAATTGAAGGATCTCGAATTTTGATTGTGGTCTTCTCA AAAAACTATGCTTCTTCCACTTGGTGCTTGCAAGAACTGGCAAAGATTTCTGAGTGTATTGAAGTACCAGGACAAACTGT GCTGCCTATTTTCTATGATGTAAGTCCATCTGAGGTGCGGAAACAAAGCAGGAATTATGAAAAAGCTTTTGTGGAGCATG AAGGAAGATTTAAACAACATTTAGTGATAGTTCAAAGATGGAGGGATGCTCTAGCACAGGTAGCAAATCTCTCTGGCTGG GATGTAAGGGACAGGCCACAATATGCAGAGATTGGAAAAATTGTTCGAGAGGTAGCATGCACATTAGGTCATAATCTTTC AACTCTACCAGAAGATATAGTTGGTTTGGACTCACGGGTGGAAGAATTAGAAAAGCTTCTGGATTTGGCCTCAGATGATG TTCGAGTTGTAGGGATTGGTGGCATGGGTGGAATAGGAAAGACAACTTTTGCTACTGCTGTGTATGACAGAATCTCTAAT CAATTTGATGCATCATGTTTTATTGACGATGTAAGCAAAATTTATGCAAACTGTGGTCCCATTGGGGCACAAAAGCAACT TCTTTGTCAAATTCTAAATGAAGAAAATCTTCATGTATGGAATACTTGTAAGGCAAATAATTTGATTCGAAATAGGCTTT GTCAAACAAAGGTCCTTATAGTTCTTGATAATGTTGATCAAGTTGAACAATTGAATAAGTTGGGTATTGAACGGGAATGG CTAGGCTCAGGGAGTAGAATCATCATAATTTCTAGAGATGAGCATGTCTTGAGAGCATATAAAGTGGATGAAGTTTACAA GGTTCAACTGTTGAATTATCATAATGCTCATCAATTGTTTTGTATAAAAGCTTTTGAATGTGATGATATAATGAGGGATT ATATGGGATTGATAGATGATGTACTAACGGCCTCCCATTAG
Protein sequence (LotjaGi5g1v0114700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDCKRIQSSSSPQMKWKYDLFVSFRGEDTRNNFTDHLFGAFQRKGFVTFRDDSKLRKGEHISTELLQAIEGSRILIVVFS KNYASSTWCLQELAKISECIEVPGQTVLPIFYDVSPSEVRKQSRNYEKAFVEHEGRFKQHLVIVQRWRDALAQVANLSGW DVRDRPQYAEIGKIVREVACTLGHNLSTLPEDIVGLDSRVEELEKLLDLASDDVRVVGIGGMGGIGKTTFATAVYDRISN QFDASCFIDDVSKIYANCGPIGAQKQLLCQILNEENLHVWNTCKANNLIRNRLCQTKVLIVLDNVDQVEQLNKLGIEREW LGSGSRIIIISRDEHVLRAYKVDEVYKVQLLNYHNAHQLFCIKAFECDDIMRDYMGLIDDVLTASH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 8 | 160 | 153 | 1.7E-43 | ||
| Gene3D | 12 | 182 | 171 | 2.0E-65 | ||
| PANTHER | 15 | 367 | 353 | 2.0E-128 | – | |
| PANTHER | 15 | 367 | 353 | 2.0E-128 | – | |
| ProSiteProfiles | 16 | 157 | 142 | 30.732 | ||
| SMART | 17 | 157 | 141 | 2.4E-42 | ||
| Pfam | 17 | 160 | 144 | 2.7E-41 | ||
| Gene3D | 183 | 348 | 166 | 9.3E-33 | – | |
| SUPERFAMILY | 185 | 376 | 192 | 8.5E-43 | ||
| Coils | 193 | 213 | 21 | - | – | |
| Pfam | 199 | 369 | 171 | 5.6E-19 | ||
| PRINTS | 216 | 231 | 16 | 2.4E-9 | – | |
| PRINTS | 292 | 306 | 15 | 2.4E-9 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi5g1v0114700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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