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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0119000 |
Transcript ID | LotjaGi5g1v0119000.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT5G07620.1 Protein kinase superfamily protein; Swiss-Prot: sp|P33543|TMKL1_ARATH Putative kinase-like protein TMKL1; TrEMBL-Plants: tr|A0A151TX34|A0A151TX34_CAJCA Putative kinase-like protein TMKL1; Found in the gene: LotjaGi5g1v0119000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:24898899..24903515) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGCTATATTCTCTTCTAATTTCTATAGCAGACGAATCATGAACGACAAACATACATCTATCCCGCATTTCGCTCCAT CATTCAATCTAGTTACCCCAACATCATCTAACTTCAATTTTGCATCTCACAAAATTCCAAATCTCTCCCTCACATACACG TCATTCTTGGTGTGGCAGATGAGTACTTTCACACACATAAGCAGTAACACCAGAGTCAATTTCAGATAGAACCTCACATG CCTTAGATCTGTGTCACATTGCATCCACATTCCAGCGTGTAAATGCTTTAACTCTTCCATAGTCCCACAAAGAAACTCTT CACTGCTAAGATCTCTGCTCCTCCAATTATTGTAAACTTTTTGCCACCTCAAGTAAATTCCATTCCAGACCACAAAGTTC TCTTCAACATGCTTCTCCTTGTCCTATACCCACATGGGGATATATCATTTTCCATGGAATATCAACCCAGATTTCCATCA AAGATGAACTCTTTTCAATCCATCTCATGAAACCCAGATCCTAATTTCCATTTATTTGTACCCCATTATCTCATTTACCT CTTATTTGCTAGTCTGATACAAAAAGATCAGTTTTTTCAGAGAAAGAAAATCACCCTCCATGCTGATATTAGTTATCACA CTAGCTTCAGCTGCTTTGTTAGTACTTGTTGGACTCTATGCCTTCTTTTACCGCAAGAGGGTATCAGAAAATGAGAACAA GGACATTGAAAGCTCAGAGCACAAGCAGGAAGAGATAGCTCAGAAGGAGGACTTGGTGATCTTTCAAGGAGGAGAGGACT TGACAATTTGTGACATTTTGGATGCTCCTGGGGAAGTGATTGGAAAATCCAATTATGGGACTCTGTATAAGGCTCTGTTG CAGAGGAGCAACAGAGTGAGGCTGCTGAGGTTTCTGAGACCAGTGTGCACCACAAGAGCTGAAGAGCTGGATGAGATGGT TCAGTTTCTTGGAAGGATTAGGCATCCTAATTTGGTTCCACTTCTGGGATTTTACACTGGGCCAAGGGGAGAGAAGCTTC TTGTTCATCCCTTCTATAGGCATGGGAATTTGACTCAATTCATAAGAGGTAATGAATTAATGATTGTCCTTTTTGAATTC TGTTTTTGGTTCAGGAAATTTCTGGTCTTCTTGTTGCTTTGTGAAAAAATAAGTTTGTTTGGTGTTTTGTCCTTGTCTTG TTAAGATGATGCTTTAGAAGGCATGGCAAAGCATGATCTCTAGTAAATTTGAAAATCATTCACTTAGTGCATATTTGGAA ATCCTTCTACAATTGATTCTGAAGACAAAATCAATTCTAGGAGAAGCTTTTGTGAGTAGCTTTTAGGTGCCAGAATTGAT TCTGAGGAAATAAAAGCTGATCCAAACATGCTATCAATCTGTAAGGTATGAAGAATGTTGAATTTTGATGATTTGGGAAT TAAGGAAGAAACATTAGTACATTACTAAAGAAGCATCAGAATTTGTGTTGACTGTTAATATGCCACTACACTAACAATTA CATCATATTTACATAGTAGAGAAAGTGCTTGTTGGTTTGTTTATATGCTATTATTGTTGCATTACTTGAAAAGAAGTAGG GTAAAAATGGTCAAATTTTCTTTATGTGCAAATATTAGTTTTAGTTTCTCAATGCATTGAATTGAACTTTAACAAAATTG GCTTTTCCTTTTAGTGGCAGAAAGCTGAATACATTCAACATTTCTTTCTTCTTTTTAGAGTCTGTTTGGATATAAATTAA AGAACACTTATTGAAGCTTATCTACTAAAAAAAGCACTGGATAAGCTCCAATAAGTGTTGTTTAGTCTGCATCCAAACGG GTTCTTAGTCCTACCAAAGATGGTGGCTTTTACTTTGAATGGTTGTCCTATGTCTTATTTATTGATCAATGATGTTCACT TAACAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATACATAGAATATCCATTGGCATAGCTAAAGGATTAGAGCAT CTTCACACAGCACAAGAGAAGCCAATTATCCATGGAAACCTCAAGTCGAAAAACATTCTTTTGGACCGCTCGTACCAACC GCACATCTCAGATTCCGGCATCCATCTTCTGCTGAACCCCACTGCTGGCCAAGAATTGCTTGAAAGTTCAGCTGCTCAGG GTTACAAGGCACCTGAGCTCATCAAAATGAAGGATGTCAGTGAAGAGAGTGATATATATAGCCTCGGCGTAATTTTGCTG GAATTGCTTTCCGGAAAGGAGCCTATCAATGAGCACCCAACTCCTGATGAGGATTTCTACTTACCAAATTTCATGAGGAA TGCTGTTCTTGGACATAGAATTGCTGATTTGTACCATCCAGCCATTCTTGTCAGCAACACTAGAGGTGATGAAATTCCAG TTACAGAAGAATGCATTCTCAAATTTTTCCAACTTGCTATGGCCTGTTGCTCCCCTTCTCCTTCAATTAGACCTAACATA AAGCAAGTCCTAAGGAAGCTTGAAGAAATTATACAATAGGAGCCATGTGGGATTTTAAAAGATTTATTTGGATAGTGGAA GGCCTTAGCTACTTTTGCTGCAAAGTTACTGCATCCTTCAATTCTTCAAATTTATAGGTAACAATGATGTGGTTGTAGAC AATAACATTTATATATGAGAAAAATTAGGCTAAAGTATACTGCTCACATCATGTTGAATTCGCAATCAAACAAAAACTTC AGGACAGTTGATGTTGATGTTAAGGGTATAAGTCAAATGAGGAATTATAGCTTGAATCAATGGGTGCCTATTTCTAGATG TTAAATGTGGATACTAAATTGCTTACTTTGTTGATAACATTTTTGAATTGTTAGGTAAAAGAAGTGAATGTGTGACATGG AGAGCGTGACAAATTAATTTCTCTGTTATCACACTTCCGGATCATATTATTTATGCCATAGTTTTTATGAGAGAATATGA AGATTCATTTACTCTCCAGAATGGCTAGTCTGAGTTTTGCTGTTGTGGTAAGACACATAATTTGTGACGAATAATGTTAT TTATGCAGTGTCCCCAATCAAATTCCATGTTATTGGTCTAGAATTGAAACTTCTAAAGTGCAAAGGAATCTGAATAATTA TGTAGGCCAGGAAATGGGATTATTTGATCTTTGAACCATCGCTTCTATGCACTATAAGTGTCTGGGAAGTTTTTGTTTTT GTTTTGGTCTTGTTTAGGTCTCAGCAATTCCATTTCAATATATTCCTTTGTTTACTTGAGATAATTTTGCAGTCATTTTT GTCTTCAATCACTCGCAGATAATTATGTTCGAGTCGAGAACATTCACATTGTTTAGGTGAGCTTAGCACTCCAAATAGAT ATTTTTTTTATACACAAGACTTAAACCAGATACCTTACTTAACGTGAGTCAATCATATATGACTTGAAACAATCATCTCT TTGTCAGCTCTTTTATTTACTTGACCAATAGTTTTCCTGTGTCAGTATTATAATCTTCATTTGATAAAATAGTAGTTTTC AGTCATGGACCTTGTAGTTTAAGTAACCTAATCATTCCCTCTCAATTCTAACGATTCTGACATTGCACGTTTACCAAACA GGTAAATTAGAGTATCAACTATCAAGTACCATTTGCCATTTCTTATTTCCCATTTGCTAGCATACAAGATGGTAGTTGGA AGGTAGGTGTGGGAGGGTCTGCGAATTCATTGCTGGTACATCACTATCTACATATATAAGCACCAAGTGACCAACTAAAG TTGGTTTAGATTGTTAATCTCTTTAAGACCACAATAATTATTAAATTGCAACTTTAGTCAAATAATGGAACATGTGCTTT CTTAAACGTGATTGTCACCTTGGCGAAGGACCAATTAATCATCCGTAATTTCTCCATACACATCGGGGACATGTGGGGGG CATAAGGACCAGGTAGGTCAACATATGCTACATATGGTTCCCACTTTATCCCTTCATTAATAGCTGTGCCATATTCATCT ACACTAGCATGGCTGGCAACATATGTTTCCATATTTACGCTTATTTTGATCTAGACTTAGATCCGTGCGTTGCACGATAA GAGAAATAATTTTTATTTGGCTATTAGTTTTTGCATATTAGCTTTTGTTGTTTACACACGATAAAAAAATATGAAAAAAG GCTCCATTTATTTTTATTTTACAATTTTTATTTTAATTTGAAAGGAATTGGAGCTTGTAAATTTCTTTTTATGAAGAAAA GCATGTAAAAAGGCTCATTTAATATGATTTTTTCTTTGATGGAGTAGAAAGTCACATATAAAATAAAATACTACAAATGT GTCAATAATATTTTTGAAAAAGGTGCCAAAAAAATTAAGGAAATTTAATAGCAAGTAATGTGATTGTAGATAACATTTTT TTCGTGTATGTTATGTGATTCATTACTGGCATTGGATCTTCTTCCTTTTCTTCACATATATCTTATTTGATTTTTTGTTT TTTGTTTTTTTGCAATTGAACATGTGATGTGAGAATTAATTTTGTAATAGAATTTCTCATTTTCAGTAGAGCAATTTTGT GATTATTATTGACTTATTTAATTGTTGATCACATGTGTCTATTTAATTTATTTTCAT
CDS sequence (LotjaGi5g1v0119000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGATATTAGTTATCACACTAGCTTCAGCTGCTTTGTTAGTACTTGTTGGACTCTATGCCTTCTTTTACCGCAAGAG GGTATCAGAAAATGAGAACAAGGACATTGAAAGCTCAGAGCACAAGCAGGAAGAGATAGCTCAGAAGGAGGACTTGGTGA TCTTTCAAGGAGGAGAGGACTTGACAATTTGTGACATTTTGGATGCTCCTGGGGAAGTGATTGGAAAATCCAATTATGGG ACTCTGTATAAGGCTCTGTTGCAGAGGAGCAACAGAGTGAGGCTGCTGAGGTTTCTGAGACCAGTGTGCACCACAAGAGC TGAAGAGCTGGATGAGATGGTTCAGTTTCTTGGAAGGATTAGGCATCCTAATTTGGTTCCACTTCTGGGATTTTACACTG GGCCAAGGGGAGAGAAGCTTCTTGTTCATCCCTTCTATAGGCATGGGAATTTGACTCAATTCATAAGAGATGGAAATGGA GAGTGTTACAAATGGTCTAACATACATAGAATATCCATTGGCATAGCTAAAGGATTAGAGCATCTTCACACAGCACAAGA GAAGCCAATTATCCATGGAAACCTCAAGTCGAAAAACATTCTTTTGGACCGCTCGTACCAACCGCACATCTCAGATTCCG GCATCCATCTTCTGCTGAACCCCACTGCTGGCCAAGAATTGCTTGAAAGTTCAGCTGCTCAGGGTTACAAGGCACCTGAG CTCATCAAAATGAAGGATGTCAGTGAAGAGAGTGATATATATAGCCTCGGCGTAATTTTGCTGGAATTGCTTTCCGGAAA GGAGCCTATCAATGAGCACCCAACTCCTGATGAGGATTTCTACTTACCAAATTTCATGAGGAATGCTGTTCTTGGACATA GAATTGCTGATTTGTACCATCCAGCCATTCTTGTCAGCAACACTAGAGGTGATGAAATTCCAGTTACAGAAGAATGCATT CTCAAATTTTTCCAACTTGCTATGGCCTGTTGCTCCCCTTCTCCTTCAATTAGACCTAACATAAAGCAAGTCCTAAGGAA GCTTGAAGAAATTATACAATAG
Protein sequence (LotjaGi5g1v0119000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLILVITLASAALLVLVGLYAFFYRKRVSENENKDIESSEHKQEEIAQKEDLVIFQGGEDLTICDILDAPGEVIGKSNYG TLYKALLQRSNRVRLLRFLRPVCTTRAEELDEMVQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNG ECYKWSNIHRISIGIAKGLEHLHTAQEKPIIHGNLKSKNILLDRSYQPHISDSGIHLLLNPTAGQELLESSAAQGYKAPE LIKMKDVSEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILVSNTRGDEIPVTEECI LKFFQLAMACCSPSPSIRPNIKQVLRKLEEIIQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 21 | 21 | - | – | |
Phobius | 1 | 1 | 1 | - | – | |
TMHMM | 2 | 24 | 23 | - | – | |
Phobius | 2 | 17 | 16 | - | – | |
PANTHER | 15 | 351 | 337 | 2.6E-132 | – | |
PANTHER | 15 | 351 | 337 | 2.6E-132 | – | |
Phobius | 18 | 21 | 4 | - | – | |
Phobius | 22 | 353 | 332 | - | – | |
Gene3D | 30 | 145 | 116 | 1.6E-10 | – | |
ProSiteProfiles | 68 | 352 | 285 | 30.676 | ||
Pfam | 71 | 348 | 278 | 1.1E-32 | ||
SUPERFAMILY | 71 | 350 | 280 | 2.05E-51 | ||
Gene3D | 147 | 353 | 207 | 8.6E-45 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0119000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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