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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0132800 |
| Transcript ID | LotjaGi5g1v0132800.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome c1, heme protein, mitochondrial; TAIR: AT5G40810.1 Cytochrome C1 family; Swiss-Prot: sp|P25076|CY11_SOLTU Cytochrome c1-1, heme protein, mitochondrial; TrEMBL-Plants: tr|I3S7F6|I3S7F6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0132800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:31105027..31109419) extracted from Lotus japonicus Gifu genome v1.2.
GGACTACTAAGGACATTGCTCCAAGTCCAAGCCATTGTTGAACATATTGCAAAAACCATTCTGCTGAGTGGTACAGTGGA CGTACATACCTGTTCATGCCAAAAAAAATTGAGGAGTTTATAACAGCTTGTGTTCCATGGAATAGTTGTGTCTTTCCCTA ACAGCTGCTATATAATTATTGCAGAATCCTTCTTCTATGTCATCCATTGTCACAAAGAACAATGATGCTGGCTCAACTGG CAGCAGCTCCATAAGAGCCCTCGCATTAATTGGAGCTGTTGTCTCAGGGTTTTTGGGTTTCGCGACAACAGCATCAGCTG ATGAAGCTGAGCATGGCCTGTCATGTCCAAGCTATCCATGGCCTCACGAGGGCATCCTCAGTTCATATGACCATGCTTCG TGAGTCTAACCTGAATTTTCCCTATATTTTCCTTTTTTACTTTTTGCCCCACAGAATCATTTGCCATGTTAGGGCCTATG TGCACTAAAACTGTTCTCTGTTGCATTTTAAAGGCAAATTAGAGCCAGTTAATTATAATTACATGTTTATAATTATTCCT TAGGCTAATGTTTGGATTGATGGAACATAATGGAATGAAACAGAATGAAATATAATGGAATAGAGTGGAATGAGATGAAA TGGAATAGAAATCTCGTTTCATTCCTTTGATATTTTATGATGGAACGTAACAAATTTACCACTCCATTATTTTGATAATG GATGTAGATGAAACACAATGGATTGTAACTGTTAGAAATCCTAAGTTAGAACCACACAACACCACAAAACCTTAGGCTTA AGGCAATGGGTGTGTGTGTTCTTTATTATATATGCACTTGTGCACTTGCTAATCTTGGCAATGTGGGACTTCTTTGAGTC ACCACTTTATTATCTCTATTACTCCCCCTCAATTGGGACTCCATCATTTTTTTTTTTTGCCTGTGCCTTGCACTCCAGCG GGAACATCAGTGGTCGTCGGACTTGTGCTCCTTCGTCTGAGTCTGCCTTTCGACTTTCTTTGTCTGGGCTAGTACTCTAG CGGGAACATCGGAGTTCCTTGGACTTGTGCTCCTTCATCTGAGTCTGAGGTCTTGGCTTGCGCAAATGGGACTGCCATTT TTGCTTTTTTTTTTCAATCTTTTTTTTTTACTTTTTTTTTCGGATTTTTTTTTTACGTTTTTTTTTTTTTTGAAGCGGAA GTCATAGCTTGGATCAGACCAGCTCTGATGGTGACTCAAAGAAGTCCCACATTGCCAAGATTAGCAAGTGCACAAGTGCA TATATAATAAAGAACACACACACCCATTGCCTTAAGCCTAAGGTTTTGTGGTATTGTGTGGTTCTAACTTAGGATTTCTA ACATGGTATCAGAGCCAATGGTTGTTTGACCATGGGTCTGGGCCCCTATCCTAGATCCATTTGTTGTGGAGACCTCCCAT ATTTGGGCCACCAGTTTCATTCCACGCTCCAGATGTTCTACACTGGGCGTGAGGGGGTGTGTTAGAGTCCCACATTGGCT AGAGATGTGGCCAATCAATTGCTTATATATGGTTGTGCAAACCTTAACTCTTGAGCTAGCTTTTGTGGTTAAGTTAGGCC TCCTTCAGTAACTTATTCATTCCTTCATTACACTTACTTTAAAAGCACTAATATTTATGTGATAAACATTTCTATTTTCC TGCATTTTACCTTTACTTGATATTATACTATTAAATCTCGTATCTATGTAATCAAATATTTAAACTTAATATAAATTCAT AAAAATTTAATCTGAAAAATATATTTTTCCATGACATATTTTGAAAAAATTAATTTTAAGCTAAACTAAAATGTCACAGC TGAGAAAAATTGTCTAATCAATGATGACATCAAGTTTGGTGGTTATTTTGTTTTGGTAATTGTTTGCCTTATATGAATTT TGTAATTTTAACGTGAAGTATTTGGTTCGAAGTATATTTTCTTTTTTCCTTTACCTTCTATATTTAGATTTTTTAATGTG GATCTTATCTTCTAATTCATTTATTTTTTTTTTAAATTACCTTACAACATACAAGAAGTTGACACGTAAAAATAAAAAGT TGTTTGTTACAGAAGCAGAACTAACCACTTTCGAAAATAAACATTAAAATATATTAATAATAAAAATATTTACTATGACA CATCCTTGTATAAAGTTTAAATCGATGCAACGAAAAATAAAAAAAATAAAAAATAAAAATATTAGGAAATATTTTAAAAA ATTATATACAAACATTGTAATATATGTTTTTATGGCTAGCTCGTTTATATAAACAGTTACGCCTCTGGTCTGGTTGACTA GTAATATTTACATTTATTATTTTTATTATTATTATTATTATATAAAAAGATAATAATTAAATAAAACTGCATCATATAAA AATAGAGGGAGGGTAAAATATCATGTATAACAATACGTAACAATGGCCTATGTATAGCGTATGAGAAGAAAGTTAGAAAA TATTTGAATATATAATATAGGTAAGGTTAGAAAACTAAGTCAAGGTTTTTGTAGTGATAAGCGTTTCCATTCCATCATAT TCCATCCAAAATGGTGGCAAGTAAATTGATGGTAAGTAATGAAATGTTGTACCGTCCATTCTGTTACATCCTCATGTAAC AAAAGCAAACTCTGGATCATAATAACATTTCATTCCCCTCCACCACCTTCCCATCAATCCAAACATGACCTTATTTTGAT TTTCATTTTCATCTCAGGGCTTTCTCCTGAGCCAGCCCAGAACTCATAATAGAAGTATTATATTGTGGTGAATATGTATT ATTCTCTTACTGCTCTATACTACTGTCATATTCAAATCGAATTTCACATATATCATAATTATTACTGATTACATTCTCAA TGCATTCATCTAATTCTTCATGAGTAGGATTCGTCGTGGACATCAAGTTTATCAACAAGTTTGTGCTTCCTGTCATTCTA TGTCTTTGATATCATACCGTGATTTGGTCGGTGTTGCTTATACTGAAGAAGAGGTAAAGGCTATGGCTGCGGAGATTGAG GTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCCTTCCTCAGCCATATGC AAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGTAATGTCAGTTG TCTGCTAGTAACTTTGATTTTCTATTGTATGTATACCAAAATGTCGTTACCTTTTGTATTTTCAGGCTCGGCACAATGGT CAGAACTATGTGTTTGCCCTTCTAACCGGTTATCGTGATCCCCCTTCCGGTGTTTCGGTAAATTTTTCTCTAAACATCAT TTGTAAAACTACACTCTACTTATCAACCGAACTTTGTGCATTGTGCAGAAGTTGTGATATGAAAGTTGCTAGACCACTTG ATGGGTGATTCAGATGATGGGTAGTCGAATAGTTATGTGTAGGGAGGGACCAAGAAAAATTATAGGTTCAACCTTTAAGA AGCATTTAGAATTTAATATTATTATAAATGATTCATAAAGAACATTATGAAGCCAGTTGATTCATATTGCCAACCCCACA AAATGAAAAAAGGCTAGGTTTTTTGTTTCTACTTACATGTACTAAATATTTAGAATTTACAAGAATTCCAACCTGATGAG AAAAGGCTAGGTTTGTGGTTTTAACTTAGCATGTAAATCAAGTTATCAGCCTTGCTTGTCTATAGATATTTACTATGAGT AATGAAGTTCATTATACGTTCTTAACTTTCTAATTCTCGTAAATTCTAAATATTTAGTCCAAGTTCCTCGTTATTCTGTC CCCAAATCAGTGTGTGAATACTGTGCTTAAAGTAAATTTTGTTGATGATTATCTTTTAAATAATAATGTAGATTAGAGAA GGACTGCACTATAATCCTTATTTTCCTGGCGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAGTATGA AGATGGTACCCCTGCTACAGAATCTCAGGTACTTCTATTTGTTGCCGATTGATTTCAGTGAATCTTATATCGATGAACTT GGGAAAAATGAAGCAATACTTTTTCTCCTATTATGTTTTGTTGCAGATGGGGAAAGATGTTGTGTCATTTCTGTCTTGGG CTGCCGAACCTGAGATGGAAGAGAGAAAACTGGTTTGTTTCCTTTAATTCCTTTTTTTCTACCTGAGCAAATGAAGGAAG TGTTTTATTTTCTAAGGATATTGCGACTGAATGCAGATGGGATTTAAATGGATATTTGTACTATCACTAGCATTACTTCA AGCTGCCTATTACCGCCGCCTTCGGTGGTCTGTTCTAAAGTCTCGCAAGCTGGTTCTTAATGTTGTCAATTAG
CDS sequence (LotjaGi5g1v0132800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCCATTGTCACAAAGAACAATGATGCTGGCTCAACTGGCAGCAGCTCCATAAGAGCCCTCGCATTAATTGGAGC TGTTGTCTCAGGGTTTTTGGGTTTCGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGTCATGTCCAAGCTATC CATGGCCTCACGAGGGCATCCTCAGTTCATATGACCATGCTTCGATTCGTCGTGGACATCAAGTTTATCAACAAGTTTGT GCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTCGGTGTTGCTTATACTGAAGAAGAGGTAAAGGCTAT GGCTGCGGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCC TTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACC AAAGCTCGGCACAATGGTCAGAACTATGTGTTTGCCCTTCTAACCGGTTATCGTGATCCCCCTTCCGGTGTTTCGATTAG AGAAGGACTGCACTATAATCCTTATTTTCCTGGCGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAGT ATGAAGATGGTACCCCTGCTACAGAATCTCAGATGGGGAAAGATGTTGTGTCATTTCTGTCTTGGGCTGCCGAACCTGAG ATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTACTATCACTAGCATTACTTCAAGCTGCCTATTACCGCCG CCTTCGGTGGTCTGTTCTAAAGTCTCGCAAGCTGGTTCTTAATGTTGTCAATTAG
Protein sequence (LotjaGi5g1v0132800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSIVTKNNDAGSTGSSSIRALALIGAVVSGFLGFATTASADEAEHGLSCPSYPWPHEGILSSYDHASIRRGHQVYQQVC ASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPQPYANEAAARFANGGAYPPDLSLIT KARHNGQNYVFALLTGYRDPPSGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPE MEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLNVVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 41 | 41 | - | – | |
| Phobius | 1 | 41 | 41 | - | – | |
| PANTHER | 2 | 284 | 283 | 3.3E-190 | ||
| PANTHER | 2 | 284 | 283 | 3.3E-190 | – | |
| Phobius | 21 | 33 | 13 | - | – | |
| Phobius | 34 | 41 | 8 | - | – | |
| Phobius | 42 | 247 | 206 | - | – | |
| Gene3D | 44 | 239 | 196 | 3.9E-91 | ||
| SUPERFAMILY | 48 | 238 | 191 | 9.16E-73 | ||
| PRINTS | 53 | 72 | 20 | 3.1E-78 | ||
| Pfam | 55 | 271 | 217 | 2.0E-97 | ||
| ProSiteProfiles | 67 | 174 | 108 | 7.443 | ||
| PRINTS | 73 | 92 | 20 | 3.1E-78 | ||
| PRINTS | 118 | 138 | 21 | 3.1E-78 | ||
| PRINTS | 151 | 175 | 25 | 3.1E-78 | ||
| PRINTS | 189 | 200 | 12 | 3.1E-78 | ||
| PRINTS | 200 | 219 | 20 | 3.1E-78 | ||
| PRINTS | 220 | 239 | 20 | 3.1E-78 | ||
| SUPERFAMILY | 239 | 283 | 45 | 1.96E-13 | ||
| PRINTS | 239 | 254 | 16 | 3.1E-78 | ||
| Gene3D | 240 | 281 | 42 | 2.8E-11 | – | |
| Phobius | 248 | 265 | 18 | - | – | |
| Phobius | 266 | 284 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
Expression pattern of LotjaGi5g1v0132800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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