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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0151700 |
| Transcript ID | LotjaGi5g1v0151700.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT5G43920.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q5SP67|WDR26_DANRE WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A072VM11|A0A072VM11_MEDTR Transducin/WD40 repeat protein; Found in the gene: LotjaGi5g1v0151700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:39607763..39615423) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAGTAATCATTCTGAGGTGCTTATTGGTTCAAAAGCGTTGTTTAAAAAACATGAATTTGTGAGGATTATAGTTCA GTGTCTGTATTCATTAGGGTACAGCAAGTCTGCATCTTGTTTGGAAGTTGAATCTGGGGTTTTGTTCAAGTCCAAGGAGT TTCAGTTGCTTGAATCGCATGTTTTGAATGGGAATTGGGATGGTTGCATTGGTTTTCTTAATTCCATGAGGGATATTATG GGTGAAGCTGTGGAGTCTGCTCTGTTTCTTGTCCTGAGGCAGTGTCTTATGGAGTATATAAAGCATGGTGAGGTAACTTT GGCCTTGGATGTGTTGAGGAAACGAGTTTCCGCGTTGCATTTGGACCGTTACAAGGTTCACAGCCTGGCTAATAGTATGC TTTCCTTGAAGGATACCGAGATTGGTGGCGCCGTGGATGGTGATGCTGTTCGTGATTTGCGGAGGAAGCTGTTGACAGAT TTGGAGAAATTGCTCCCTCCGCCAATTTTGATACCGGATGGAAGGCTTGAGCATTTAGTTGAGACTACTGTTACTGCTTG GGTTGATTCGTGCTTGTATCACAATTCGTCGAATCCGATTTCACTCTATGAGGATCATCGGTGTGGTAGGGATCAGATTC CTACTACAACTACCCAGGTGAGTTGGGTCTGTAGAGTGTAGACTATTACTGTATGCTGGATAAATTGGTTATATTTTTAA GCTGATTTTTAAGATGAGTTGAAATCTGTTTGATGTTCTAGAAGAATTTGGTTTTGGCCATTTGCAAATCGATATTAAAT GACTGACAGATCCTTTTGCATCTCATTTTAAACATGTCATTGTGGGTTTGTGTTCTGGAGAGGGGGGGGGGGGGTGTTAA AATAAAACTTCAGGGAAACACTTGATGTTGAAATATGAAGTTTAGATCAATATTAGTACATCTACCAATGACTTTTATTA TCCGTAACATTTCCTCCCATTTAAAAAAAATTAAATGCATTCCAGGTAAATGCTGCCTATTGATCCAAATTAAGAGTTTG CTTTGTCTGTCTTTTAAATATGATTTGAAACACAGAATTGTGTTTCTTCTCATAAATTTATATTATATTGTTGCTTTTTA GTGTGGGACATTTAGACTTTTTTTCTTTGAAGGCGGGACATTTAGTCTTTTCTATTGTGTGTATTGTTAAATACTATACT TTGTTTGCATTTTTTGTCAGTTGTGGTTTTTAACTTTTGCCTTTACTGGTTAGATCTTGTATTCTCTCTTTCATTGTAAG TATGGACCTCCCATTATATGCCTTCAAAGTTGGATATGACAATATGACATTATTTCAGTCTTCTTCGTGTCGAACTATGC ATTTATGAATAGAGATAATCTTTATCTAGTTAAGCATTTATGATGTGCTCCTGTATGAGTGAGTTAATTGCTTTTTTACA TAAAAAGGAACAACGCACTTATGTTTTCTAGTGTCTACCATCCATATGTTTCTTGCACTTATGTTTGTTGTCATTTTCCT GTACCATATGAGAACACGTCAAGAATTTTTTCCCTCTTTCTGATTCCTAATCAGAATTCATTTTTTGGACCATATGGCAA GAGATTAATTATGGGGGGCTGCTTTGTATGACAATGGGGGATGAATCAGAATTGAAATCATGTAGATATATTGTGAAATT AATATACTTTTGAGTGCTTAACATTACGTGGTTTACACATTAAATAACACTTTTCCCCCTTGCCATAATGCCATCATTGC AGGTACTGACTGGACATAGAAATGAAGTTTGGTTTGTTCAGTTTTCTAATAATGGAGAGTATCTAGCTTCTTCATCCTAT GATTGTACAGCCATCATATGGAAGGTATCATGTTATTGTCATTAAAAGCAGCATACATTTTTGCATTAGTTGATTTTTCC AATATTAATGTCTTAATTTTATTGGGCATTGATTAAACTTCTGTGTTTGAGCTCACAATATGCATGACAAAAGTTTAGCT GGGAAATTGATACATGTCTATTGTATAATCAGATACATATTCTGATAGGAACTCAAGGTTTGGGGTTAGTTAGTTAGTTA GTTATACTTAGTGAGTTAGTTAGAATGTTGTTGAGGCATTTAGCCTATAAATAACAGACATTAGAGAGTTAGGGGTATCT TTGTATTCAGTTAGGAATTGGGTTTAGAGAGAAAAGTGGTTCTCTTTCTAGGGTTAGAGAGGGTGTTTGGTATCCCTTTC TCTTGTATCTTTCCCCTAGTTTCCAATTGGGAATTAGGTTTTCTATCAATAAAAATCAGGTTTCCATCATTGGTATCAGA GCACCATCCTGGTGCCTGAACCACGACAATCCTGGGCTGCACAAGAGGAAAGGAGAAGAATGGCAAGTTCAGAAGTTGTT CAGGAAAACCAAGAATTGAGAGCGAGGATGGAGTCAGTGGAGGCTATCACCGGGAAGAACGAGTTCGTACTAGCGGCGGT GGCGAAGAAAATGGGGGTGCGACTTGTTGCAAATCCTGATCTTGAGAAAGAAATCTCAAGATTGGAGAACAAATTGCGAG AACTTGAAGAGAGGAGAAAACAGAGGGAACAAGAAAGAAGAGAAGCAGAGGCATCGCAGATGGAATCTGATGTCAGGTCG GAGGAAAAGTTAGCGGCAGCAAAGGAGATTCTGGAGAAACCAGAGGTTGCAGTGATGGCTAACCAATCGACACCCGTTGA TCATGAAGCGGCAGAGACAGAGCGTGTAGCGGCGGCGGTATCGCCAGCGAATTTGGAAACCGCGACGGAGACAGTTTCAG CAGTGGTGAAGGCGACTCAGAAATCCATTCTTGAAACAGAGAGAGAATCAGAAACGGCAGCGGAAGAAGACGCTACGGTG GATGAGCAAGCGTATGAAACAGAGGGGGTTTTCACCTCTGAGATGAAGCAACTCAATCTTGAAGTAGCGGAAGACAATCG GGTAACAGAGGAGGAGAGGGAGAAGGAATTGGGGTCGACATCAATGGCGGAGAAAAACCTGACCTTTGATACAGAGGTTG AAGGAAGAGATGGTTGGGAGAAGTTTGGATGGAAGATCCATCAGCAACCGATGATGGAGAAACACATCCATCTCCGGCCA CCGACGCTGAAAGGAGGAAAGGCCAAGGTGTCGCCAGTGGCGGAGACCCGACAACCACAGAAGATGCAATCGCTTCGACG GCCGCCACCGAAACCGCCGCACGTCGGGGTGAGAGTGTTGCATGCAGGAGGATCGTTGAATCGACATCCTTGCAGGCAGG AGGAGGCAAAATGGTCACTGGCGAAACCACCGGATTTGTTTGGTCCGCCGGGTTTATTGGGAGGTGACAGTTCCGACTTG GCGCTGCTGGCTCAGTCGTGCTGTGAAGGAGGTGGTGTGATAGTGACATTGCATTGGCTCCCAAGTGCCAAAAACCTTAT GCGGTGGCCACTGAAGGTAGACACGAGGCAGGAAGAAAAAGTGGTGCTGGCAACACATGACACAAGCAAAGACAAGTGTC CCACTGGAGTGATTTTCTACAACAGCAGCAACGTTTATGAAATGGGAAAAAGGTATGCACATGTTTTTGGTAGATTGGGC CAAGCACAACTTAGGATAAAAAGAGGGTCTGTTGATTGTATTGTTAAATGGGTTGCTATCCAACTTCTTACTGGATTGGG GAACATTGTGGAAGACAAATTTCTGAGAATAATAGGCCTTGCATGTTTCAATTGGGAAATCAAGAGAAAGCTACAAAGAG GGTTTATTCAAACCTGGAATTGTTTTCCCAATTACTGTTTGTTCCTAATAGCTGGGAGTCTTACCAAAGTTCCAGATTTT TCAGTGTGTCAGGGTGCTGTTCTGAATGTAATGGGATTCTGTATCTGGTGTATCAAAGCAAGCTTGAAGGAGATGGGTGA GCTATGTGAGTTCCTTCTGATGTGTCAAAATGGTTTGGTAGCAACCCAGGTCAATGTTGAAAATTTGACAGCAGGAGAGA ATTATCACTACTTGGGCTCATGGGGCCAAGACCAGCTTGACATGGATTTTGGAAATCAAAGTAGAAAAACTGAATTGTGT TTGGACTCCATTGGGTATCAAATTGATTTGGAAAATATTAGTTTGGAGGGGTTTTCTTTTGATGATTTCTATGGCTTGCT ATTCCAATTGGTGGTGGTCACCAATTCATCCATGGTTGTGATTATCTGCTTCATGCACTGGGATCCAGGAGGAAACATGA ATTGTCACTTTTGGATCTTTGGCATAGCTGTATTTGAGATTGTTCATTGTTGTAGCTTGTATTTTGTTACAGCCACAATT GCAAGGGAAGGGGAGGATTGTGCTATTTGTATTCAACCCATACAGTTGCAACCTTCTGAATTAATGTCATTTGAGAAGAC ATCCAATCAGCATTTGTTGGCTAGTTTTGGGAAGATACCTGCCACTTCTTTCATGTTGGGATTTGCTTTTAAAAATGCTG CAACAGTGCTATTTCAATCTCTTTGCATCAACGGGAATTTCTGCTACTTGTTTTTCCAGCAATGGTACTTATGCCACATT AGTTTCAGCAGGACAGTGAAGATTTCCCCCAAGTCATACATGTTTTGGACTTTTTGCTTTCGGCTATGGGCCCTGGGTGG AAGATGTGATTACCACTCTTGGGAGTTTGGAATAGCAGTTCAGGAATTTGTCACTTTTGTATAGTAGGCCTACTTGTTCA CTGTTTTAGTTTGCTTTTTGTTCCTCACCTTGAGGACAAGGTGAATTTTCAGGGGGGGGGGGAGTATTGATAGGAACTCA AGGTTTGGGGTTAGTTAGTTATACTTAGTGAGTTAGTTAGAATGTTGTTGAGGCATTTAGCCTATAAATAACAGACATTA GAGAGTTAGGGGTATCTTTGTATTCAGTTAGGAATTGGGTTTAGAGAGAGAAGTGGTTCTCTTTCTAGGGTTAGAGAGGG TGTTTGGTATCCCTTTCTCTTGTATCTTTCCCCTAGTTTCCAATTGGGAATTAGGTTTTCTATCAATAAAAATCAGGTTT CCATCATATTCCCTACAATTTTTAGCGGAATTCATGAGTTTTCAACTGCTAGGTTCTTTTGATTAGTTATGTCATTAGCA TGAAAAAATTTGGACTGAAAGAGACATGCAAATTTAATGGGCATGGTGTATGTAGATCCAAAGAAGTACTTCTAAGCTAA TAAACAGTCAGGGGAACATCAAATGATTAAGGAAAAGTACATATTTTTAATAGAATGATATCTTTGATTCCTCTTCCCTC AAAATCTAGTTTTTGATCGAGCTAAATGACGTAAAGTGATCCATATAGCCGACCTCACTTGGTGAGATAAAGCTTTTATT GTTATTGATGTTTAGATTTATGAGCTTAAGAGAGAAAAGGGATTGATTTCCTAGAAAGATTTTTCTTATAGAAAGAAGAG TTGGAGTTCATTATCTTGTCTGGAAGTTAATTGAAATAAAAAAACTAAATGATGTCTCTTCTTTGGTTTAGGTCTTAATA TGTATGGGTAAATTATGCTAGGTTTGTTTCAAAGGAGGGGAGGGGGCCTTTTAATTTTTATCATGTTTTGTTAAGAGAAG GGAAGGGAGGGGAAGGCGGGGTAATCCTTGTCTTGTTTGATTCATTACGGAAGGGGAGAGATTCTAAAACTAATTTTCTT ATGTTGCTCTTACATTCAATAATTTTGGGTTTCAAAATACTAGTAAGGACATTCTAGTCATATAATTTATCTCCCCTCAA AATCCCTCCACTTTTGGAGGGGAGCCAAAATTAAGTCAGGAGGGGCTTTGGTCCCCTCCTCTCTTGTCCTAAAGTTTGAA GCGACCGATATAGCTTTAAAAAAACTGCTCCCCTGCCCTGCCCTCAAATCCCCTCAACATAAGCACTATATTAATGAATG TTAGGGTCAGTCAGCCAGGAAGATAATCTGGAAATGGCTAAAAATATAGGTCTCCGTTGTTTGGTTACATGCTACTGCTA ACCTGACTCCCAAGTCCCAACTCATATTCCTTTAGCCTAGTTACTGGACTGGAAGGTCATACAAGAATCCTTGCCAAAGT CCTAGTTACAACATAAAAAGTGAATGCATAATTAATAATGGAAGAAAATAGTCGTATACAAAATGCAAGTTCTAAAATAA TAGGAGTATAATATGCCGAATATTTGTTGATTGTTGAATTAATGTCTGAATTCTAAAACTGGAATTGGTTTTTGAAGTTT GTCTCCTTTCTTCTATTGGTCTAGGCTTGACCGAGCAGTTGAATTCATTATGGACTGTACCAAGTTTCTTCCTGGGAAAA TGGCTTGTGTCCAAGGTAGTCAATATAACATGGCATGTTTTGTGAGATTAAGTGCTCATCAGAAATTATCTGGGTTTCAA AGAATTAAATTGTGTGCATATATATATATATATACATATATATATATATTTGTTTTGAAGACTTCCGGAGAATACTCTAA GATGTTTGACAGTTCAACTGTTGAGGAATGTGAATTTTTTTAATATCCTGCAACCTTGACTGCAATAGATCAAATTTGAG TTCTGCCAAACTATATCAATTTAGTAGTTGATAAGCAAGATAAGAAAAATGTTTAAAATTTTACTCTCGATTTTTAGTTT TATGCTGTAAGTTTGAATGTGGAAATGGAGAGACATTATAGTAATTTGATTTCTAAAGTCTTGAAGTACTTGTGCCAGGT GCAAGAAGATGGGAAATTGACATTGAAACACACACTTTTTGGTCACCAAAGTGCTGTATCTTTTGTGGCATGGAGTCCTG ACGACACCAAGTTGCTCACATGCGGGAACAAAGAAGTTCTGAAGCTGTGGGATGTTGAAACAGGTACATGCAAGCATACA TTTGGGAATCAAGGCTTTGTTGTCAGCTCATGTGCCTGGTTCCCCAACTCAAAGCAGTTTGTGTGTGGCAGTTTCGACCC TGAAAAGGGCATCTGCATGTGGGATTGTGAAGGAAACGAGATGAGATCATGGAGAGGAATGAGGATGCCCAAAGTTGTAG ACATTGCTGTTACTCCAGACGGCGAGTATCTTATCAGCATATTCTTGGATAAAGAAATTCGGATTTTGCATCTGAGAACC AATGCTGAATGCGTCATTTCGGAGGAGCACCCGATCACGTCTATTTCAGTTTCTGGAGATAGCAAGTTCTTCATTGTGAA TCTGAACAGCCAGGAGATTCATATGTGGGATGTGGCCGGCAAATGGGATAAACCATTGAGGTACACGGGCCATAAGCAGT GCCAATATGTGATCAGGTCGTGTTTTGGTGGATTGGACAGCGCGTTTATTGCCAGTGGCAGCGAGAATTCTCAGGTAGTT TCCTTTTCTGTGTACTATTTAGTAGCAGCTAGTTATAGAAATTACTTAACCATCAATTTACACCGCAATTTAATTTCTAA AATAAAATAAAATCTTACACCGCAATCTACACTCTGCATTGCACCTCAAAATTGATCTCATGCAGGTATACATTTGGAAT TCTGGGAGCCCGAGGCCAATAGAGGTTTTATCTGGGCACTCCCTGACTGTAAATTGTGTGAGCTGGAATCCAAGAAGGCC ACAAATGTTAGCATCTGCAAGTGACGATCATACAATTCGCATATGGGGACCCAGCTTGTAG
CDS sequence (LotjaGi5g1v0151700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTAATCATTCTGAGGTGCTTATTGGTTCAAAAGCGTTGTTTAAAAAACATGAATTTGTGAGGATTATAGTTCA GTGTCTGTATTCATTAGGGTACAGCAAGTCTGCATCTTGTTTGGAAGTTGAATCTGGGGTTTTGTTCAAGTCCAAGGAGT TTCAGTTGCTTGAATCGCATGTTTTGAATGGGAATTGGGATGGTTGCATTGGTTTTCTTAATTCCATGAGGGATATTATG GGTGAAGCTGTGGAGTCTGCTCTGTTTCTTGTCCTGAGGCAGTGTCTTATGGAGTATATAAAGCATGGTGAGGTAACTTT GGCCTTGGATGTGTTGAGGAAACGAGTTTCCGCGTTGCATTTGGACCGTTACAAGGTTCACAGCCTGGCTAATAGTATGC TTTCCTTGAAGGATACCGAGATTGGTGGCGCCGTGGATGGTGATGCTGTTCGTGATTTGCGGAGGAAGCTGTTGACAGAT TTGGAGAAATTGCTCCCTCCGCCAATTTTGATACCGGATGGAAGGCTTGAGCATTTAGTTGAGACTACTGTTACTGCTTG GGTTGATTCGTGCTTGTATCACAATTCGTCGAATCCGATTTCACTCTATGAGGATCATCGGTGTGGTAGGGATCAGATTC CTACTACAACTACCCAGGTACTGACTGGACATAGAAATGAAGTTTGGTTTGTTCAGTTTTCTAATAATGGAGAGTATCTA GCTTCTTCATCCTATGATTGTACAGCCATCATATGGAAGGTGCAAGAAGATGGGAAATTGACATTGAAACACACACTTTT TGGTCACCAAAGTGCTGTATCTTTTGTGGCATGGAGTCCTGACGACACCAAGTTGCTCACATGCGGGAACAAAGAAGTTC TGAAGCTGTGGGATGTTGAAACAGGTACATGCAAGCATACATTTGGGAATCAAGGCTTTGTTGTCAGCTCATGTGCCTGG TTCCCCAACTCAAAGCAGTTTGTGTGTGGCAGTTTCGACCCTGAAAAGGGCATCTGCATGTGGGATTGTGAAGGAAACGA GATGAGATCATGGAGAGGAATGAGGATGCCCAAAGTTGTAGACATTGCTGTTACTCCAGACGGCGAGTATCTTATCAGCA TATTCTTGGATAAAGAAATTCGGATTTTGCATCTGAGAACCAATGCTGAATGCGTCATTTCGGAGGAGCACCCGATCACG TCTATTTCAGTTTCTGGAGATAGCAAGTTCTTCATTGTGAATCTGAACAGCCAGGAGATTCATATGTGGGATGTGGCCGG CAAATGGGATAAACCATTGAGGTACACGGGCCATAAGCAGTGCCAATATGTGATCAGGTCGTGTTTTGGTGGATTGGACA GCGCGTTTATTGCCAGTGGCAGCGAGAATTCTCAGGTATACATTTGGAATTCTGGGAGCCCGAGGCCAATAGAGGTTTTA TCTGGGCACTCCCTGACTGTAAATTGTGTGAGCTGGAATCCAAGAAGGCCACAAATGTTAGCATCTGCAAGTGACGATCA TACAATTCGCATATGGGGACCCAGCTTGTAG
Protein sequence (LotjaGi5g1v0151700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESNHSEVLIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLNGNWDGCIGFLNSMRDIM GEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDRYKVHSLANSMLSLKDTEIGGAVDGDAVRDLRRKLLTD LEKLLPPPILIPDGRLEHLVETTVTAWVDSCLYHNSSNPISLYEDHRCGRDQIPTTTTQVLTGHRNEVWFVQFSNNGEYL ASSSYDCTAIIWKVQEDGKLTLKHTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAW FPNSKQFVCGSFDPEKGICMWDCEGNEMRSWRGMRMPKVVDIAVTPDGEYLISIFLDKEIRILHLRTNAECVISEEHPIT SISVSGDSKFFIVNLNSQEIHMWDVAGKWDKPLRYTGHKQCQYVIRSCFGGLDSAFIASGSENSQVYIWNSGSPRPIEVL SGHSLTVNCVSWNPRRPQMLASASDDHTIRIWGPSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 515 | 507 | 6.3E-191 | – | |
| ProSiteProfiles | 17 | 49 | 33 | 8.77 | ||
| SMART | 50 | 107 | 58 | 2.0E-4 | ||
| ProSiteProfiles | 50 | 107 | 58 | 9.717 | ||
| Gene3D | 209 | 515 | 307 | 1.9E-70 | ||
| SUPERFAMILY | 212 | 512 | 301 | 5.19E-67 | ||
| SMART | 214 | 253 | 40 | 7.3E-8 | ||
| Pfam | 218 | 253 | 36 | 4.0E-6 | ||
| CDD | 218 | 512 | 295 | 1.63735E-53 | – | |
| ProSiteProfiles | 221 | 516 | 296 | 35.989 | ||
| ProSiteProfiles | 221 | 262 | 42 | 12.714 | ||
| SMART | 259 | 298 | 40 | 1.2E-7 | ||
| Pfam | 263 | 298 | 36 | 8.9E-4 | ||
| ProSiteProfiles | 266 | 307 | 42 | 14.352 | ||
| SMART | 301 | 342 | 42 | 0.012 | ||
| Pfam | 302 | 341 | 40 | 0.088 | ||
| SMART | 344 | 384 | 41 | 4.8 | ||
| SMART | 386 | 424 | 39 | 5.1 | ||
| SMART | 428 | 470 | 43 | 2.3 | ||
| Pfam | 435 | 470 | 36 | 0.029 | ||
| ProSitePatterns | 457 | 471 | 15 | - | ||
| SMART | 473 | 513 | 41 | 3.1E-10 | ||
| Pfam | 476 | 512 | 37 | 1.2E-6 | ||
| ProSiteProfiles | 480 | 516 | 37 | 14.084 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0151700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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