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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0152000 |
| Transcript ID | LotjaGi5g1v0152000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] synthase; TAIR: AT2G04540.1 Beta-ketoacyl synthase; Swiss-Prot: sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl]-carrier-protein] synthase, mitochondrial; TrEMBL-Plants: tr|A0A072VM15|A0A072VM15_MEDTR 3-oxoacyl-(Acyl carrier) synthase II; Found in the gene: LotjaGi5g1v0152000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:39747533..39752613) extracted from Lotus japonicus Gifu genome v1.2.
ATCAAATACCAACAACTAAGTGGGGTTGGACATGGGCATGGCGGTGCGTGCAGCTTCACGCAGAGCTTTCATCTCCTTCT ATCGAACCGTTTCTTCAACTGCATCTTCAGGTGGAGCTCTTCCACCTCCTCCGGTTGTTTCTTCCCGAAGAGTAGTTGTC ACCGGTAACTCTCCTTCTCTCCTCCACCTACACAATCTCTCTTTCACAGTTTCATTCATTTCGTGGTCTTTTTCTAGGTT TGGGCATGGTGACACCTCTTGGTTGTGGGGTGGATAAAACTTGGAAGCACCTGATTGGTGGGGAATGTGGGGTAAGGGCA TTGTGTTTGGAGGATCTCAAGATGAATGGTTTTGATAGAGAAACCCAGTTGAGTACATTTGAGCAGTTGACATCCAAAGT TGCTGCGGTTGTGCCCACAGGAACGAACCCGGGTGAATTCAATGAGGAATTGTGGCTTAATTCTAAGGTGAGCTTTTATT TGCTACACTGGAAGGTGTGCATAAGGTCTCTAGTTAGGTATGGAATTTCTCTGTTTTCAAATTAAGCATTCTCGCAATAC ACCTATAAAGGTTAAGCATGTAAGTGAAATATAATTATAAATTGTCAATAGCTCCTTAAGGATATGATGCATAAATGTCA TAAGACCTCAAAAGAAAATATGAAGTATTGTATTATTGCAAACCTGAAGCCATAGCCTGTGCTGGAGTTCTAACATAAAT TTGTGCATTGGAAACAGGACTTTGAACATTTTTATGCACACAGGCAAAGGATTTTGTCCATGAAAAATGAAACTATATTT AGTTATTTACAGTTCAGTGTCTGATTGTATTTCCTCACAGCCACTCAGTATGTTGCAGATAATTATGCTTGATATCTATG GCCTCTTAAACTGAGTCTGAAAACATTAACCACATATTTTCTGAAAATAAGAAAAAAACATTTATTTTATTTAAATTTTG TACCAAAAAGAAAGTCAAGCTGTTTTTGGATTAAATCATGGAACCCCGTGAACCTGGTGGACCTCTTGGTGGTTGACAAT ATTGTCTTTAAATTAGATGGAGGTTCCTATTGTTCCTAACATGAATGTAATCAACAGGGCTGAAAGAGAGAAAACAAAAA AGAAGATAAAGTTGGCTAAGTGTTATGTAGCTTCTTCGTGTATTTAATGTTAACGGATATTGTTTTTCTTTTACTTGTAC ATGCTGGATCTAAACTTCTATTATGCTTATTGATGTCATTGTAGTATTGTGAAATTTTCCTTAGGACCATCGATCCATAG CAAGGTTTATAGCGTATGCACTATGTGCTGCTGAGGAAGCTCTTAAAGATTCCAATTGGTTTCCCACTGAGCAGGAACAC AAGGAAAGAACGGTATGCAATTTTTGAATATGGTTCATACTTCATAACAAATAATCTGACATTTCCTCTGTGACCTATTG TATTTTAACTTCAAAAACTATCAGGGGGTGTCTATTGGTGGGGGAACCGGAAGCATTAGTGACATCTTAGATTCTGCACA ACTGATATGTGAGAAGGTCAGTTTGTAGTAACTCACTGGTATTAAGAACTTGATGATCTTTCCTCATTCAAGTTTTTCTC CATGTGCCTATAATATTTGATATTTACTTATTCTTCTCTCAATACAGCGTCTTCGTCGCCTTAGTCCATTTTTTATCCCA CGGATATTGATCAATATGGCATCAGGTCACGTAAGCATTAAATATGGGTTCCAGGTAAAGAAACTACTTTCAACTAATTG ATATTCTATCAAAAAGTTATAGTGAGCTTCTATAGGCTATGGCTGCTGGGAAGGCAACTGTTTTTTTTTTCAATTACTTA CTTTTGTAGATATATGGAATATGGATTTAGAGCATGAAGATTATTTGTTTATTGTAGGATGAATTAACCTCCAGTGTAAA TGATTTAGGCAGTATATTCTCCTGCTTTTATGTTTTTGATCTTTTAATAATTAAACTAACATCTCCAGTGAGAAATATCA TCCTTCTGAAACAAACGTAGAACTTTCCTAGGATATAGTTATATATGTCAATCAGGTTTAAGTAAACACTTGTGATATAT CTCCTGGTGGAAATGATATATGTTCTTAACATATGGATATTACCATATTCTTCTACATGGTAGTAAAGCTGATTGTTGTT GCAGTCTTGCAGAGATATTACCATATTCTTTTATGCTAGGACTTTTGTATTAGGTAAAGTTAGTAATAACAGAATGAGAG TTAGTTGGTGCTGTTAGGAGTTTGTTAAAGGGGGCTACATGCTGTATCAGCTATATATCAGCCAGTGTTAGAGAATGGAG GTTCAGAAAAGTTAGTTGAGGAGAAGGAGGAACCAGGACCTCTTGTAGCCAGGACTCAGGAGTGGGCGGTGTCAGTTTGT CTACATTGGACAATACCGACTTTCTTGCTAGAATTCTCAATATAAGATTCATTCATTCTTCTGAATTCTGAACCAGTTTT ATCACTTTTTTATTACTGATAATCATGAGCATGTGAAGAACCTGTTCCCTATTCCTGAATATAGGGGCCAAATCATGCTG CAGTCACTGCATGTGCTACTGGATCACATTCTATTGGTGATGCCGTGAGAATGATTCAATTTGGCGATGCAGATGTTATG GTAGCTGGAGGCACAGAGTCCAGTATTGACGCATTATCCATTGCCGGATTCTGCAGGTAAAGTCTGATTGACACCTTGTA TCTTCTGTTAGTTAAACCACCTTAGTAATCTGTTGTCCATTTTCCTCTAATATTTTAAACTTTATGTGTGAAACTTGCAG GTCTCGAGCTTTGTCTACAAAATATAATTCAAGCCCCCAAGAAGCATCACGACCGTTTGATAGTGGTCGAGATGGGTTTG TGTGAGTATAACAACATTGTAGATTTGTTTCTAATTATAGTAATTTATTTCTCTTACTTGGTATTTGTTTTCTGACTTCA AATTATTGCTTTGTTTGTCTTTCTTCTTATATCCAAGTTATATTTTTGCTCAGGATAGGTGAAGGTTCTGGAGTCATGGT CTTGGAGGTTGGTTAAGAAATTTATTCTGTATCATCTATCCCTCCAATTCCTCTTCACCTACTTTGTTAAATCTTGACCT TTCTTGTATATTTGTTCCCTCCATTGTTTAGGAATTCGAGCATGCTAGAAATCGAGGAGCCAAAATCTATGCAGAGGTTC GTGGCTATGGGATGTCAGGTAGTTTGTTGCAGGATATGTAGAATTTTCTCTCTTGTCTTAGTTTTACATGTGGTTGACTT CTTTTTATCTGGATTTTGACTAGGTGATGCATATCATATTACTCAACCTCCTAGTGATGGAAGAGGTGCTATTTTGGCCA TGACTCGCGCTTTAAGACAGGTTTGTTTTATCATTCTATGTTGATTTGTATGTTATGTAACAATAGAGGTTTTCTGTTGG CTGAGCTGCCAACAATAAGTATACATGTCCTGATGGTATGGCCTGTTATATATATTTTAGTCTACCGCATAATTTATTTT GGTATTCAGTTATTTTCATAAAAATATAAGTTAGATATTTTCTCCCCTTTTCACTTCCCCTGTAATTAGTGTGTACAGAA GATGGCCAAACCATTGTTAGAATCAGCATGTGGGATGTTAGCTAAGTTTGAAAGGAAGAAAAATTATCATGTTCAAGAGT AGATATTTCAGTGCCTTTGGCATTTATTATTTGAGACCGCTCTAGATGCCTCTTGTTTAGCAGAAATTAAGTCTTCATGA TTAAGAATTCAACTCTTCTGGCATATCGTACTTTTGTTTGCTCTCTTCATTCGTGGCTTAGCCACAGTCTAGATGATCTT CATTTTAAGTGATTGCCTTCTCCTAAATTGCAGTCAGGTCTTCATCCTTCTGATGTACATTACATAAATGCGCATGCTAC ATCTACAACTTTGGGCAAGTGAAGTAAACCCTCACTGATTCCAGCAATTTAAGCTTGAATATTTATTATTTTGGATACTT CATATCTGGATGTTTGTGCTTATTTCATCAACTATCTCACCAGAATCTTCTATACAGGTGATGCAATAGAAGCGAATGCT ATCAAAACCATATTTTCTGATCATGCTGACTCATCTTCTTTCGCCTTCTCTTCCACCAAGGTAAATGTGATTGCAAACTG TGTGTGACCAATAAATTATATGCTTATCTGATTAGCAGTCTAATCTGAAACTCATCCATGGGAATGGAGATGCTGTGTTA TACTTTTTTTTATAACTTATTTGGATGGGGTGAACGATGATACATTGATAATTCATTTTTCTAACTATACATTTTTTTGG GTAAGATTTTCTTCCAATACATGCTGGATCATGTCCATGACATTTCCATAATTTCTGTTTTCAGGGGGCTATTGGTCATC TTCTAGGTGCTGCTGGAGCTGTTGAAGCAATATTTGCAGTTTTGGCAATACGACATGTAATTAAATATTTCACGTTTTAT GTACTTGCATCATTGAAGTTGTGGCGAAGCATTTTTGCACATACTGTTGCTTTTGTCTTAATCTATAGCCATATACGCTT AATCTAATAGAGTATCATATGATGTTCTCATCGCAGGGAATTGCTCCATTAACTCTTAATTTAACTAAGCCAGATCCCGT ATTCAGTGATGGTTTCATGCCATTGACTACTTCAGAGGAGATACCAATTAGAGTAGCTATGTCAAATTCATTTGGTTTTG GAGGAACAAATTCGTCCCTACTTTTTGCTCATACTGAATCAGACTAATGAGATAGTTGCATCTCACTCCATTGGTATTAT TCTACAAGAGCTGATTGCATTATGCTGAGGAGAGTTTAATAGCCTAAAATTCTTGGTGGAATATGTATGCCTGAATGTTG TCTTCTACCATGTACATTTTAATAATGCTATTGCTTTTGCTCATTAGTTTTAGCTCTAAAAAATATTCAAAACCCGAATT GTTGACTATTCAGCAGTGGTTTCTATTGCGAGTTCTGAAACTTGAAAGGGAAGGTTCAGCAGGTTTTTCTTATGATAATT GCATTGTGGAGCCATTATAGATAGACCAGGATGGTTGGCGG
CDS sequence (LotjaGi5g1v0152000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCATGGCGGTGCGTGCAGCTTCACGCAGAGCTTTCATCTCCTTCTATCGAACCGTTTCTTCAACTGCATCTTCAGG TGGAGCTCTTCCACCTCCTCCGGTTGTTTCTTCCCGAAGAGTAGTTGTCACCGGTTTGGGCATGGTGACACCTCTTGGTT GTGGGGTGGATAAAACTTGGAAGCACCTGATTGGTGGGGAATGTGGGGTAAGGGCATTGTGTTTGGAGGATCTCAAGATG AATGGTTTTGATAGAGAAACCCAGTTGAGTACATTTGAGCAGTTGACATCCAAAGTTGCTGCGGTTGTGCCCACAGGAAC GAACCCGGGTGAATTCAATGAGGAATTGTGGCTTAATTCTAAGGACCATCGATCCATAGCAAGGTTTATAGCGTATGCAC TATGTGCTGCTGAGGAAGCTCTTAAAGATTCCAATTGGTTTCCCACTGAGCAGGAACACAAGGAAAGAACGGGGGTGTCT ATTGGTGGGGGAACCGGAAGCATTAGTGACATCTTAGATTCTGCACAACTGATATGTGAGAAGCGTCTTCGTCGCCTTAG TCCATTTTTTATCCCACGGATATTGATCAATATGGCATCAGGTCACGTAAGCATTAAATATGGGTTCCAGGGGCCAAATC ATGCTGCAGTCACTGCATGTGCTACTGGATCACATTCTATTGGTGATGCCGTGAGAATGATTCAATTTGGCGATGCAGAT GTTATGGTAGCTGGAGGCACAGAGTCCAGTATTGACGCATTATCCATTGCCGGATTCTGCAGGTCTCGAGCTTTGTCTAC AAAATATAATTCAAGCCCCCAAGAAGCATCACGACCGTTTGATAGTGGTCGAGATGGGTTTGTGATAGGTGAAGGTTCTG GAGTCATGGTCTTGGAGGAATTCGAGCATGCTAGAAATCGAGGAGCCAAAATCTATGCAGAGGTTCGTGGCTATGGGATG TCAGGTGATGCATATCATATTACTCAACCTCCTAGTGATGGAAGAGGTGCTATTTTGGCCATGACTCGCGCTTTAAGACA GTCAGGTCTTCATCCTTCTGATGTACATTACATAAATGCGCATGCTACATCTACAACTTTGGGTGATGCAATAGAAGCGA ATGCTATCAAAACCATATTTTCTGATCATGCTGACTCATCTTCTTTCGCCTTCTCTTCCACCAAGGGGGCTATTGGTCAT CTTCTAGGTGCTGCTGGAGCTGTTGAAGCAATATTTGCAGTTTTGGCAATACGACATGGAATTGCTCCATTAACTCTTAA TTTAACTAAGCCAGATCCCGTATTCAGTGATGGTTTCATGCCATTGACTACTTCAGAGGAGATACCAATTAGAGTAGCTA TGTCAAATTCATTTGGTTTTGGAGGAACAAATTCGTCCCTACTTTTTGCTCATACTGAATCAGACTAA
Protein sequence (LotjaGi5g1v0152000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGMAVRAASRRAFISFYRTVSSTASSGGALPPPPVVSSRRVVVTGLGMVTPLGCGVDKTWKHLIGGECGVRALCLEDLKM NGFDRETQLSTFEQLTSKVAAVVPTGTNPGEFNEELWLNSKDHRSIARFIAYALCAAEEALKDSNWFPTEQEHKERTGVS IGGGTGSISDILDSAQLICEKRLRRLSPFFIPRILINMASGHVSIKYGFQGPNHAAVTACATGSHSIGDAVRMIQFGDAD VMVAGGTESSIDALSIAGFCRSRALSTKYNSSPQEASRPFDSGRDGFVIGEGSGVMVLEEFEHARNRGAKIYAEVRGYGM SGDAYHITQPPSDGRGAILAMTRALRQSGLHPSDVHYINAHATSTTLGDAIEANAIKTIFSDHADSSSFAFSSTKGAIGH LLGAAGAVEAIFAVLAIRHGIAPLTLNLTKPDPVFSDGFMPLTTSEEIPIRVAMSNSFGFGGTNSSLLFAHTESD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| Gene3D | 34 | 312 | 279 | 7.6E-82 | ||
| PANTHER | 37 | 470 | 434 | 3.8E-195 | – | |
| PANTHER | 37 | 470 | 434 | 3.8E-195 | ||
| TIGRFAM | 39 | 469 | 431 | 1.4E-161 | ||
| Pfam | 39 | 304 | 266 | 7.9E-54 | ||
| SUPERFAMILY | 39 | 311 | 273 | 4.66E-68 | ||
| SMART | 41 | 474 | 434 | 1.9E-15 | ||
| CDD | 44 | 469 | 426 | 0.0 | – | |
| ProSitePatterns | 211 | 227 | 17 | - | ||
| SUPERFAMILY | 272 | 471 | 200 | 2.95E-65 | ||
| Pfam | 312 | 428 | 117 | 9.3E-37 | ||
| Gene3D | 318 | 471 | 154 | 2.6E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi5g1v0152000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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