Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0154800 |
| Transcript ID | LotjaGi5g1v0154800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein, putative; TAIR: AT4G28560.1 ROP-interactive CRIB motif-containing protein 7; Swiss-Prot: sp|Q5PP26|PII2_ARATH Piriformospora indica-insensitive protein 2; TrEMBL-Plants: tr|A0A0B2SWK9|A0A0B2SWK9_GLYSO Piriformospora indica-insensitive protein 2; Found in the gene: LotjaGi5g1v0154800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40172149..40174206) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGCTTAATCAAACACAAATGTGAAGGTACTATTTCCTTTCGTTGTTTCTTGTTTCAATTGGCCATGTTCACTAGCCT CCAAGACAAGTTTACTTTTGCAATTTCAAAACCTGCAAATTAGCAGCCAGGCAGTAAACACCAACAGCAACTACAAAACA ACACAACAAACTCTGTCCCATTCCACACTCAACATCCCTTTTCCATTATTATTCCTCCAAGGAAACAACCCACATTCTAA ATATAATAGTAACACCACTCCCAATTCCAAACAAACCTCAAATCAAAACCCCACACCCACACCACATTCCATTCTCCTCT TAAAACCACCACAACATTCCTTATTTCCCTTCTTCCATTCTCTTGTCCACATACCAAACCACTCCAATGGCTGTGCTCTC AACAGCAAATGCTGTCACAACCACACTCTTGTGCTTCTTCATCTTCTTCATCTCCCTCTCTCACCAGCAACCACCGCTCG ATTCCGCTGAACAGGAAGCAGTTTACGCGGTGCTGAACTCCCTCAACCCCACCATCCCCTGGCGCACGCTCTTCTCCGAC GATCTCTGCCTCTCCGCCCCACACGGCATTGTTTGCGATTACCCTCTTCCATCTTCTTCTTCCACCACCGAACAGTCACA AAGCGCACACGTTGTGGAGCTCAGCTTCGGCTACGTTTCGGACGAGACTCCGAACCCACCTTGCTCCGATAACGCCACCC TCAACCCTCTGCTTTTCACCTCTTTCCCTTACCTCCGGAAACTCTTCTTCTACAAATGCTTCAACAGCACGCAGAGTTCA CACCTTTCTGATCTTCCCCCTCTTCCTCCAACTCTGGAGGAGCTTGTTTTCATCGAAAACCCTGCTTTTGTTACCCCTCT TGCCCCCTTTCTCCGTAACCTCACCGCTCTCAGGAGGCTTGTTTTGGTCGGAAACGGATTCTCCGGCGAGGTTCCGCCGC AGATTGGTGCTTTCGCCGACTTGGAAGAGGTTACCCTCTCCGGAAATCAGCTCAGCGGCGAGGTTCCGGCGAGTTTGGGG TTGTTGAAGAAGGTGAAGATTCTTGATCTGAGCCACAACACGTTCAAAGGGTGTGTCCCTGAAAAGCTTGGGAATCTCAC TCAACTTCTGAAGCTTGATTTGAGCTACAATGGTTTTGGTTGCAAGATTCCAGAGAGTTTGAGGGGCTTGCAATGCTTGG AATTTTTGGACATGAGCTTCAATGGTTTTGGTAACTTTGGGGTTCCTCTGTTTCTTGGTGAGATTCCCAGGTTGAAGGAA GTGTACCTGAGTGGGAACTTGCTATCTGGGGTGATTCCAGAAATATGGGAAAATCTTGGGGGTGTTGTGAAAATTGGATT TTCAGAGATTGGTCTGACTGGGAAAATCCCTGCATCAATGGGGGTGTATCTGAAAAATTTGTCTTATCTTGGGCTTGATA ACAACAAGCTTGAAGGGCCTGTGCCAGAGGAGCTTGGGCTTCTGGAGTTTGCTGATGAGATCAACTTGGAGAACAACAAT TTGACTGGTAGAGTCCCATTCTCAGCTAAAAATGGGCACAAGATCAAGTTGGCAGGGAACAGAGGACTCTGTTTTCACAA CCAAATTAGTTGTTCTGGTGAAAATGGAGGCAGAGTGGGTCAACTCAAGCCCTGCAAGAAAACAGCTGTTACTGTTCCTG CTGCTGTCCTTTTCAATGGGGCTTCTTTGGTTGGTTTTGATCCTCTTACGTTGGTCCTGGGATTCTTGTTTGTTTTCACA GGGTTTTGAGGGAGGGTAGGTTTTGTCCTTATTAGACTGGAGGTGACCAAGTTATTTTTTTTTTGACCAGAGCAAAGAAT ACATGTTTATTCTGACTAGCTAGGAAGATCCTCATCCAGTGTAAAGTTGATGGGATAGTGATCATACTGATGATAGTTAA GAAATTAGAAATGTTTAGGGCAAGAAGAAAACATTGATCACTTTAATTGTACTCAAAATTGAAGTATATATATGTTAATT TTTTGTTTCTTTTGCCACTTTTGCTTCTGATTAATTGTTTTTCCCTTAGTTATGCTGT
CDS sequence (LotjaGi5g1v0154800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGCTCTCAACAGCAAATGCTGTCACAACCACACTCTTGTGCTTCTTCATCTTCTTCATCTCCCTCTCTCACCA GCAACCACCGCTCGATTCCGCTGAACAGGAAGCAGTTTACGCGGTGCTGAACTCCCTCAACCCCACCATCCCCTGGCGCA CGCTCTTCTCCGACGATCTCTGCCTCTCCGCCCCACACGGCATTGTTTGCGATTACCCTCTTCCATCTTCTTCTTCCACC ACCGAACAGTCACAAAGCGCACACGTTGTGGAGCTCAGCTTCGGCTACGTTTCGGACGAGACTCCGAACCCACCTTGCTC CGATAACGCCACCCTCAACCCTCTGCTTTTCACCTCTTTCCCTTACCTCCGGAAACTCTTCTTCTACAAATGCTTCAACA GCACGCAGAGTTCACACCTTTCTGATCTTCCCCCTCTTCCTCCAACTCTGGAGGAGCTTGTTTTCATCGAAAACCCTGCT TTTGTTACCCCTCTTGCCCCCTTTCTCCGTAACCTCACCGCTCTCAGGAGGCTTGTTTTGGTCGGAAACGGATTCTCCGG CGAGGTTCCGCCGCAGATTGGTGCTTTCGCCGACTTGGAAGAGGTTACCCTCTCCGGAAATCAGCTCAGCGGCGAGGTTC CGGCGAGTTTGGGGTTGTTGAAGAAGGTGAAGATTCTTGATCTGAGCCACAACACGTTCAAAGGGTGTGTCCCTGAAAAG CTTGGGAATCTCACTCAACTTCTGAAGCTTGATTTGAGCTACAATGGTTTTGGTTGCAAGATTCCAGAGAGTTTGAGGGG CTTGCAATGCTTGGAATTTTTGGACATGAGCTTCAATGGTTTTGGTAACTTTGGGGTTCCTCTGTTTCTTGGTGAGATTC CCAGGTTGAAGGAAGTGTACCTGAGTGGGAACTTGCTATCTGGGGTGATTCCAGAAATATGGGAAAATCTTGGGGGTGTT GTGAAAATTGGATTTTCAGAGATTGGTCTGACTGGGAAAATCCCTGCATCAATGGGGGTGTATCTGAAAAATTTGTCTTA TCTTGGGCTTGATAACAACAAGCTTGAAGGGCCTGTGCCAGAGGAGCTTGGGCTTCTGGAGTTTGCTGATGAGATCAACT TGGAGAACAACAATTTGACTGGTAGAGTCCCATTCTCAGCTAAAAATGGGCACAAGATCAAGTTGGCAGGGAACAGAGGA CTCTGTTTTCACAACCAAATTAGTTGTTCTGGTGAAAATGGAGGCAGAGTGGGTCAACTCAAGCCCTGCAAGAAAACAGC TGTTACTGTTCCTGCTGCTGTCCTTTTCAATGGGGCTTCTTTGGTTGGTTTTGATCCTCTTACGTTGGTCCTGGGATTCT TGTTTGTTTTCACAGGGTTTTGA
Protein sequence (LotjaGi5g1v0154800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVLSTANAVTTTLLCFFIFFISLSHQQPPLDSAEQEAVYAVLNSLNPTIPWRTLFSDDLCLSAPHGIVCDYPLPSSSST TEQSQSAHVVELSFGYVSDETPNPPCSDNATLNPLLFTSFPYLRKLFFYKCFNSTQSSHLSDLPPLPPTLEELVFIENPA FVTPLAPFLRNLTALRRLVLVGNGFSGEVPPQIGAFADLEEVTLSGNQLSGEVPASLGLLKKVKILDLSHNTFKGCVPEK LGNLTQLLKLDLSYNGFGCKIPESLRGLQCLEFLDMSFNGFGNFGVPLFLGEIPRLKEVYLSGNLLSGVIPEIWENLGGV VKIGFSEIGLTGKIPASMGVYLKNLSYLGLDNNKLEGPVPEELGLLEFADEINLENNNLTGRVPFSAKNGHKIKLAGNRG LCFHNQISCSGENGGRVGQLKPCKKTAVTVPAAVLFNGASLVGFDPLTLVLGFLFVFTGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 34 | 34 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 9 | 22 | 14 | - | – | |
| PANTHER | 19 | 436 | 418 | 1.2E-140 | – | |
| PANTHER | 19 | 436 | 418 | 1.2E-140 | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| Phobius | 28 | 433 | 406 | - | – | |
| Gene3D | 75 | 415 | 341 | 2.4E-59 | ||
| SUPERFAMILY | 120 | 403 | 284 | 2.72E-46 | – | |
| Pfam | 222 | 280 | 59 | 6.8E-8 | ||
| Phobius | 434 | 457 | 24 | - | – | |
| Phobius | 458 | 460 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0154800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…