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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0162300 |
| Transcript ID | LotjaGi5g1v0162300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase; TAIR: AT2G33255.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q8RYE9|GPPL3_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255; TrEMBL-Plants: tr|A0A151T186|A0A151T186_CAJCA Putative uncharacterized hydrolase YOR131C family; Found in the gene: LotjaGi5g1v0162300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:41642816..41647066) extracted from Lotus japonicus Gifu genome v1.2.
AAATATTAAACTTATTTAAGTATTTTATTGGTCCAGAAAAGGCAATCGTTATTGCACCGGAGGGGTAGGTGGCCCAATAA CTTGTCTCTTCCCTGACTCCTACCGTCACCGAATTCAGATGTGGTGGTGGACTGGTGGCGATCACCGATCACTTGGGGAC CGACACTGTTACACTCACTTACACTCCCCGTCCGAGGAGGATGAATATGGAAGGAAGAACCAGTAGTAGTAGCTAGTAGC TAGTACCATGAAAAATGTCATCATCGGAGTACCACAAACCACAAACACAATCCTCAGTACCCACAACCACACAAACTGTT CATTATCATTATCATTGATTGCTGCCTGTTATTAATCCAAACTCACTCATTCATTCACTCAATGCTGTCCACAACCATTA CAAGGGCTTTCCTCTCCCTCTCCTCCACACTCCCACGACACGCCGCCGCCACGCGCACTATGTCCACCACCACCACCAAA ACGCCTCTCAGAGGCGTCGTTTTCGACATGGACGGCACCCTCACCATCCCCGTCATCGATTTCCCCGCCATGTACCGTGC CGTCCTCGGCGACGATGAGTACCGCCGCATCAAAGCCCAGAGCCCCTCCGGTATCGACATCTTGTCGCATATCGACCGAT GGCCTCAACACCAACAGCAACAGGCCTATGACACCATCGCTGATTTCGAGCGCCAAGCTCTTCTTCACCTCCAAATCATG CCTGGTAATCATCATCATCATCTTCTCTTTTGTTCTTCATGCGGTGCTCATTTTGATTCTCGTACTGCAGGTGCTGCTGA CCTTTGTCGCCTTCTGGATTCAAAGCAAATAAGGAGGGGATTGATAACACGCAATGTGAAATCTGCAGTTGATATATTTC ATGAGCGCTTTGGGGTTAGTAGTTTATCATGGTTTCTGCAAATGTACCTTCTTTCATAAACATGCTTTCTGTTGTTGTGC TCATGCAGTTATGACATGTAGTTTGTGTTATAGGATGTAGTTTGATTATTGTCACAATTTGGCAGTGAGTGTGGCATAAC AGCTTATGTTGTCAAGTTTCGTTGTTGACTGTTCCATTTCATTTTATTTAGGGTGTGTTTGGGTAAACAACTTGATTAAA CGCTTATGACTACACGCTTAATCATAAGCTAATTTGAGATACTAATCGAATTAAGCGAAAAATAGGTTACAGGTATGCAT AAGCTCTTTCTCTTTCATAAGTTATTCCAAACAACTTATGAAAATAAGCTCAAAACAGCTTATAGGTAGACCATAAACTA TTTGCAAGATAAGCTCAAATAAGCTCTTCCAAAGATGACCTTAATCCTATCCTATCTTCAACTGAAGTGAGTAAATAAAT GGAGAAAACAAATTTGCAAAGTGGTTGAAACTGTGGTATCTATGTGGACATTCTACCATTTGGATGCAGACCAAAGAGCA CTTTTTGGAACTTATTTAGTGCATTTTCTAGTAGGTAAGCTCCAATAATCCCGCATCCAATGGGGTTAATTATTCTAAAT GGTTCATCTTTTCTAATTCTAATAGAAGCATAATAAACTGAACATACACACTCCTCTTTCTCTATCCCCCTGTTCTTTTT CACATTCAATACCATTGCTGCAGATTACATTTGCTCCAGCGTTAAGCAGGGAATTTCGTCCTTACAAACCTGATCCAGCT CCACTGCTGCATATTTGTTCTCTTTGGGAAGTTCAGCCAAATGAAGTGATAATGATCGGGGATAGCCTTAAAGATGACGT GAGTGATTCTTTTCCTGATAATGTGATTGATTCTGTGCATTTTCATGGTTTATGACTACTGGGACACTATTAGCGTTGTA ACTTTGCCATTTCAAGTGCATCAGTTCTTACTATTATCTTTATATGGAAATAATGCTTGTGGTTCTTCTAGTATCTCTTT TCACCTCTGTTTACAAACTCAAGGTTCAAGACTAGACAAAACTTTTAAAATTTGTTACCTACTAAACCATTGTACTCAAT GCGGGTGGCGGCAAGCAAAAAATCTGCCATAGAAATATGGCAGATAACGTGGATTATGACAAGCCAGTGAGCATAAAAAA ACCTGGATAGTACAGTAAAAAAAAGAACTAGTAACTTAATATCATGAACGAAAATCTGAGCCGAGAGAAAACCATCAAAT ATTACAGAAATCATATATAGAACACCATAAGTTTCATAAATTCAATAGAAAGTAAAAACCATCAAGTTCAAGTTTCAACT AACATTATAACAACAAAATATAGAAAACAAGAAAAACACAAAGAAGAAATCTATATGTCTCCTCTTCCACCCTGGCATAG TCAACTTCTTTGCCATCAATGGGGCATATCCCTCTTCCTCTGTCTTTCCTAGTCCTCAAAATTACTTCTTCCGATTCCTC AGAATTGTCTTCAAAATCTGGTTCTTCATCATCTTCAACAACTTTCTCCTTCCGTTTGGCAGTTGAAGATGCACCTGGAC CTTTCTTAGAAACCACTCAAGGACTGTTTTCTTTTCATAGTTTACCGCCTAGTATATGTTCTAGTCTCTCCAATTGTTTG TCATCTCCTGTTCTATTTGTCCTGTCCTTTAGGGTGCATCAAATGCAACCATAATCTACACTGCAACTTTTAGGTAAGTT TACACAAACCCTCTATGGTTTGATCCATTCTCATTTTTTCATACATAACTCTGAAACATAACCCCCAAAACTATGGTAAA AAGTGTAACCTTGTATTTTCTCTCAGTGGCAATTTGCACAAGAAGCAGAATAGTAATGATTTTATTTTTGAGAAGCATGT TAAATTAAGTATCATGGTTTTTAATTTGCAGACTTTCACGGTTAAATTTGACTTAAGTACATGATTATTTCTTTTTACCA CTATTTAGGGGGAGATATTTTTCTTTGGTACAGGTTAGGGGGAGATGTATTAGAATACAAAGTTTGTGAATGAAAAAGGA ATTTAGTTAAACCACACGGGTGATTCATAATTTGTCCTAACTTTTATGTATGCTATATTTCTCCTCATTGAACAATGCAC TGGTTACTAGAAGCCATCAACAAATTATTCCTATATAACCAATAACAAGTGAAAACAACGACAATCAAAAGCTTTTCTTA CTGGTGGATAAGTTGGTCTCATATGTGCCTAGATTTTGGACATTTTACACCATCTTTATTCCTACTTGTAACATAGTTAT TCTGTATTTATCTATATAGCTTTCATAGTATGTGAGAATCCTTTTTTGAAATTTTGGCGATTAAGTTATCAATACATAGT TGTATAAATTTCAATGTCTTATTGGAGGATGATGTACTTGTAACTGTGCAAATAGCAGATTTTTTAAAGTGGTACCTAAT TTCACGCTTAGCTTAAAGCAATTCCTTTCCATTTCATGCACACATATCCTAATAAATTTATGGTACTCAAATGCATTTGA AAATGGACGGTATTGATGCCTGCTTATTCGATCTTTTTACAGGTGGTTTGTGGAAGGCAAGCAGGAGCATTTACATGCTT GCTTGATCAAACAGGAAGATACGATTCTTTCCATTATGCAAATGTTGGTTTCAAACCAGATTTTAAGGTGACTTCCCTGG CTGAAGTTTACTCAATTCTGGAGGCAAATTTTGACTTGTCACTATGATGTCAAGTGTCTTTTCACGTGGACCATTTATCA AATCGTGTGGCTGATGCTAGAAGATTTGGAGGTGGCTTATATCTTGGGGTAGTTTTATTCCTTGCCCCTTGTCAGGTCAT GAAACAAATAATTCTTGAAAATTTGTGGGTCGGAGGATTTTACAGGTGCCCCTTTCTATAGAATAACGTTGGAACTTGGA TAGAGGTTAAGTTTTACTGTCTTATTGGGGCAAGTGCTAGGAAATAACTGTTATAAGCATTAATGTCTGTTGTACTGTAG ATGTTTTCACCTCGGTTTCTTGGTCTTGTAGGTTCTGTTTTAGATGTTACCTCTCTTTATTTGGACTCGTTTTGGCCGAT ATGCCTGATTTTGTGAGACTTCCAAGACAGTCATCTCCAAAGAATTGTTAATTGTGGTAAAGATTTTATATACAACAAAT CATCATATGAGTAAATGGCAGAAACCATATGATATAATGTATTAGCAGAATCTGCATATTTTACCAAGGATGCTCCTGAA CATGATAGTAACTTCTGCAACATGTATATTTCTAAAGGAAACTTATTGTTGTAAATCATATTTAAATTTGCAAACTTAGG CTATGTTTGGC
CDS sequence (LotjaGi5g1v0162300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTCCACAACCATTACAAGGGCTTTCCTCTCCCTCTCCTCCACACTCCCACGACACGCCGCCGCCACGCGCACTAT GTCCACCACCACCACCAAAACGCCTCTCAGAGGCGTCGTTTTCGACATGGACGGCACCCTCACCATCCCCGTCATCGATT TCCCCGCCATGTACCGTGCCGTCCTCGGCGACGATGAGTACCGCCGCATCAAAGCCCAGAGCCCCTCCGGTATCGACATC TTGTCGCATATCGACCGATGGCCTCAACACCAACAGCAACAGGCCTATGACACCATCGCTGATTTCGAGCGCCAAGCTCT TCTTCACCTCCAAATCATGCCTGGTGCTGCTGACCTTTGTCGCCTTCTGGATTCAAAGCAAATAAGGAGGGGATTGATAA CACGCAATGTGAAATCTGCAGTTGATATATTTCATGAGCGCTTTGGGATTACATTTGCTCCAGCGTTAAGCAGGGAATTT CGTCCTTACAAACCTGATCCAGCTCCACTGCTGCATATTTGTTCTCTTTGGGAAGTTCAGCCAAATGAAGTGATAATGAT CGGGGATAGCCTTAAAGATGACGTGGTTTGTGGAAGGCAAGCAGGAGCATTTACATGCTTGCTTGATCAAACAGGAAGAT ACGATTCTTTCCATTATGCAAATGTTGGTTTCAAACCAGATTTTAAGGTGACTTCCCTGGCTGAAGTTTACTCAATTCTG GAGGCAAATTTTGACTTGTCACTATGA
Protein sequence (LotjaGi5g1v0162300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSTTITRAFLSLSSTLPRHAAATRTMSTTTTKTPLRGVVFDMDGTLTIPVIDFPAMYRAVLGDDEYRRIKAQSPSGIDI LSHIDRWPQHQQQQAYDTIADFERQALLHLQIMPGAADLCRLLDSKQIRRGLITRNVKSAVDIFHERFGITFAPALSREF RPYKPDPAPLLHICSLWEVQPNEVIMIGDSLKDDVVCGRQAGAFTCLLDQTGRYDSFHYANVGFKPDFKVTSLAEVYSIL EANFDLSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 9 | 17 | 9 | - | – | |
| Phobius | 18 | 21 | 4 | - | – | |
| PANTHER | 18 | 247 | 230 | 1.7E-110 | – | |
| PANTHER | 18 | 247 | 230 | 1.7E-110 | – | |
| Phobius | 22 | 248 | 227 | - | – | |
| SUPERFAMILY | 27 | 242 | 216 | 6.54E-32 | ||
| Gene3D | 37 | 212 | 176 | 3.2E-43 | ||
| SFLD | 37 | 241 | 205 | 4.1E-20 | – | |
| SFLD | 37 | 241 | 205 | 4.1E-20 | – | |
| TIGRFAM | 39 | 202 | 164 | 2.4E-14 | ||
| Pfam | 39 | 206 | 168 | 7.2E-14 | ||
| Gene3D | 49 | 110 | 62 | 3.2E-43 | – | |
| CDD | 116 | 208 | 93 | 5.17444E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0162300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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