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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0170500 |
| Transcript ID | LotjaGi5g1v0170500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G63280.1 NIMA-related kinase 4; Swiss-Prot: sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2; TrEMBL-Plants: tr|V7BJC8|V7BJC8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0170500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:43897593..43902838) extracted from Lotus japonicus Gifu genome v1.2.
TAGGTATTGTGACTATTTGTGAGTGAGAGGGCGGCAAATGAAAAGAGAATTGGAAAAAGAAGTAATGCAAGCAAACTGAA AAAGAAAAAGACAGAGCCAGAAATGGTTCAACAAACACATCACATAGAAATAGGAGCAGGTCAAAGTCTTCAAAAGTGTG TGTATTCCGGGAAAAGGACGCAAGCAACAAAAAGAGAGAGAAAGAAATAAATTAAAGAGAGAGCAGAGCACGGGAACACT GATGTAAGGACACTAGCTAGGGGGTCCTCACGCTTCTCTTCCACTCCACATTTACTTCAAATCACCATTTTCAACTTGGT GATTATTTTTTTAGTTTCACTCTTTCTCTCTGAATGAAGTGAAGTGAAGTGGGTTTGATTTTCAGCTGAAAAAATGGAGC AGTATGAAGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAACAAAAAG TAACCACCCCATTCTACTCTCATTTCTTCTAAGTTCTAACTCAGTAATCTATGTTTGATTCAACTAGGTTATTTTACTTC AAATGTTTTATTTATCATGTTTGGTTATACTAAGCTCCTATGTTAATTTTTATGTATTCAGGTATGTTCTTAAGAAGATT CGCCTTGCCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGGTAGTAGTAGTAATAATGCTCCTTGTTTTTTT TCCTTTTTTTTTAGTTGAAGTTTAATTTTTTTGGCAGCTTGAGATGTTTTAGCCTAAGTTTTATAATTGATTTTTAGTCC ATAACGTATAATAGTTACAATGCAGTTCTTTCTAATTATTGGGTTACATTCTAAAATGTGATACTGGATGCTTGCTATTC TTATATGCTTTGTTGGACTCTGGTTTTGCAGATGGAGCTCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAG ATTCATGGGTAGAAAAGGTCAGACATTTAAAAAAATCAATAATTTTTTTTTGTAAAATATTGTTGCTTTTTCTTGTTCTG TTGTGTTCTGGTTAATTTGATTTACTAAGATTTTCAGGAGACCCCCCATTTTAGTTTAAGTTGACAAAAGTGAATAATAT TCACTTGTTTCTTCATAAATGCTGATACTTTTAGTTGATGGTGGAACATCCTAATGTAACACGGTATATGGTTTTATACT ATTTTATTAATTTTGATTCTGAAATTTGCAATCTGGTACCTTCACCTCCAGGGTTGTTTTGTATGTATTGTCATTGGCTA CTGTGAAGGAGGAGATATGTAAGTCATGGTTCACATTGAATTCAAGCATTTGAGGAACTCAGAATATTTATGGAGACATT TTATCTTTCCTTTGCTAATAATACATTCCCTCTATAATTTATATGCTGCACAGGGCTGAAGCTATTAAAAAGGCCAATTG TGTTCATTTTTCGGAAGAGGTTTGTCACTCTTGCAGCAGCTTCTTTTACTTCTGAATAATTTTCATTCCTATGTGAAAAC CTGTTGGTGCTTTTAACTAATTGATATCTATAAACTTTTGTACGCAGAGGCTTTGTAAATGGCTTGTTCAACTGCTGATG GCACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGGTGAATGATTTCTCTAAATTCAATAACCGATG GGGTTATGTAGCTGGCTATCTGAAACCTTCGAGAACCTACTTTATACTGATGTTTATCCACATCAATTTCAGTGTTCAAA TATCTTTTTGACAAGAGATCAAGATATACGTCTAGGTAATGACTTTCTTCATTCTATCCTTTAGCCTCACTCAGACTTCA TGAATGTGTTCAAAGTGTAAACATCTCTAATTTGTGCCTTGTTTTGGTAACCTATTCTTATGCATGGATGCAGGTGACTT TGGTCTTGCCAAAATGTTAACATGTGATGATCTTGCTTCCTCGGTACGTGTTTTGGTCAAAATATTCTTTTGATCACTTT TACTTTATCTCTTACTGTGTTCTTGACTTGCTTTACACTTCAGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCC TGGCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGTAAGATAGTACTATTTGTACTCTCAAGATCCTGT GGGCATAAAAACCCTTCCCCTTTCCCTGTTACAATTTTCTGTCAATTGCAATTGAAATTGGGTATAACATAAACATTGTG TCAGGATGCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGTAAGTTACTATGACTGCCAGTTGTT CACTTCTATTTTAATGAACCATTATTTGCAGAACTTTTTTATCATAAGGGGAACCTGGTGGGGGGTCAAATAATTCATTT GAAATGTTGAACAAAATATTTACGTTACTTCATCATTCATGTCCATGGTGATGTCTGAGTTATTTCATTATGGAGAACAA CATCAAATCAATGACTTTTTGTTGTCTTCTATTCGAGCAGGATATGCAAGCATTGATTAACAAAATAAACAAGTCTTTAG TGGCTCCACTACCAACAATGTATTCTGGTTCTTTGTGAGTACTCTATTTACTAAGAATCTTATGTTAATCTTTATCTGTA TTTTCCCCATTTTATGAAGCGGTTATGTTAGTTCCCATACCTGCAGCATTTGAGTGATGTCTGTGCCTGGTTTATTGGGA TATGCATATATTGCTGATCCTGAAAAAAATGCATCCATTAGTTTGTCAGACGGAGACCTCCATTAGATTTTGTCTTACAT TTTCTAATGGACCCAAAGTTGTTGCGAATTGGAAATTTAAGTGATCTTGCATCCATGAAGTGTTTATGTCATCATTTTGA AAACATCTACACCTTATCTTTCAATTCACTTAGTATTAGCATTCTTTGTGTCAGAAACATGTACAGTATGGGGTTTGGTT TACCAATTTACATTGTGCAATGATAACCTGCTGGTTTAGCAGCAATCAACCTTGAAACAAATCCTAATACACTCCCAGAT GTGGATATATCTTATTGACTCATTCTCAGTCTTTGTACTTGTTATTTGTTGCTGTTTATTCCATTGACCCATTAAATGAC TTTATGTAACTTGATGTATATTGTTTTCTTCTTTCAGTCGAGGCCTTGTGAAGAGTATGCTACGGAAAAATCCAGAGCTT AGGCCAAGTGTATGTTTTCTCTCGAGAATTTCTTTTATATTTTTCTATATGTAGATTAACTTAGGAAAAACTGGTCTATA CAAAGTAAGTGTAATGCATATCTTGAGTTATAAAGATGAGTCAGATGTCCTAACAGCAGAATATGTTTAGAAGCAGAATA TGAGCCAATTGTTATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAATTGTTTGTCAGCGTGTAATT TGCTCTTTTTCCATCATCATATAATGTGTTTGTGCTTATTCTGCTTGGTTACTTTGTTTTGGTAGATTTATTCAAAATGA GTTAAGCGCAATTTGTTTTCGCAGGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACAT AAAACTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAG AGCCAGCATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCT AGTATTTCTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACA TTATGAACAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCA GACGACACACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCAGTAAGTTTAAGCACACTAACAACACAG CAGCTCCATTTGTATTCATTTGATAATATAGTGCTAATTACGGAGTTTTCTAATTACATATCACCTATATTTCCTAACTC GAGTTTAGTTACTCTTATACGCAGATTCTCTTATCCATATTAATTTTCAATAGAGCTTAACTTGTCTGGGTTTCTTTGTT GAATTAATAGTGTGTGTGTGTGTGTGTGTTACTGAAGATTCTGTGCATCGATTTATTTGTTTGCTTATCATCATTTCAGC TTCCAGCATCTTATACTCCAGCTGGTAAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATG GCCACTACTACCCCTTATAGAACCAGTGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACG AATCGACAAGATGGCTGAATTCCCTCTGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACAT CAGCTCAGTGCTCTTCTGGTTCCCCAAGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTG GACAAAGCCAGTGTCCCTACCAGTGGCAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGC AACTGCTGTTTCAAGCCGTAGCCATTCCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGC GAGCGGAGGCATTGGAGGGGTTGCTTGAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTG CTGAAGCCGTTCGGGCAAGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGT ATGAGGCTTTCTGATGCACATGCACTTTTGTGATCACTAACAACAGTGTAAATCAATGTAGCAGTAGACAGTAGTACTTT ATATGTAGCTAGAATTTGAAGGGTAACTTAGCTTCTAATCTTATAATTCTAGTTGACTCCGTAGGTAGGCATTTCTTAGA CAGTTTCAACTTTCAAGTTTAATGTTAATGACTTTCTCATCAAAATATCAGTATAGATGTTCAAATTCTTCTGTTTGCGG GAAAAGAAACTCTAATTTAGTTTGTAATGTAGGCAATGTCAGTATGAAAAAAGTTTATCCTTCCATTTTGTGATGTATTT TCACATTATCGAAGTTTTTTTTAGGATACACATTATCTAAGAAGTT
CDS sequence (LotjaGi5g1v0170500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAGCTATTAAAAAGGCCAATTGTGTTCATTTTTCGGAAGAGAGGCTTTGTAAATGGCTTGTTCAACTGCTGAT GGCACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATCTTTTTGACAAGAGATCAAG ATATACGTCTAGGTGACTTTGGTCTTGCCAAAATGTTAACATGTGATGATCTTGCTTCCTCGGTTGTGGGAACACCAAGT TATATGTGCCCAGAGCTCCTGGCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGATGCTGTGTATATGA AATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGATATGCAAGCATTGATTAACAAAATAAACAAGTCTTTAGTGGCTC CACTACCAACAATGTATTCTGGTTCTTTTCGAGGCCTTGTGAAGAGTATGCTACGGAAAAATCCAGAGCTTAGGCCAAGT GCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACATAAAACTAAATAGCCCCAGAAGAAG TACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAGAGCCAGCATCTTTTTCCACTCTTT CTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCTAGTATTTCTGGAACTGAACAAGGT TCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACATTATGAACAATCTGTTGGCTGTGT CAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCAGACGACACACAATACCATCGAAGA TACCCCGAATTAGTTCCAAATATGATTCACTTCCAGCATCTTATACTCCAGCTGGTAAACTTACCCCACCAACTCGCAGA GCTTCCCTTCCACTGCCTACAACAACCATGGCCACTACTACCCCTTATAGAACCAGTGTCGGTTTTCTTCGTAGTGTGGA TTCTCCTAATATTTCTGTTAATGCGCCACGAATCGACAAGATGGCTGAATTCCCTCTGGCCTCCGGTGAGAATATTCCTC TCTTCCCTGCTCGTAGAGCTTCATCAACATCAGCTCAGTGCTCTTCTGGTTCCCCAAGGAGCATTATTGACTGCACAATC ACAAAGGACAAATGCACAATCCAGGTTGTGGACAAAGCCAGTGTCCCTACCAGTGGCAGTGATGGTGGTGCTGCAGTTTC ACATAGCAACGAGTGCTCTGAACATGTAGCAACTGCTGTTTCAAGCCGTAGCCATTCCTCCTCTGCTGAGTCTTGCCAGC GCAGGTTTGACACCTCGTCTTACCAGCAGCGAGCGGAGGCATTGGAGGGGTTGCTTGAGTTCAGCGCACGGCTCCTGCAA CAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCTGAAGCCGTTCGGGCAAGAGAAGGTTTCTCCAAGGGAAACAGCTATTTG GTTGACTAAGAGCTTCAAAGAAACTGTGGTATGA
Protein sequence (LotjaGi5g1v0170500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAIKKANCVHFSEERLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLTCDDLASSVVGTPS YMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQALINKINKSLVAPLPTMYSGSFRGLVKSMLRKNPELRPS AAELLNHPHLQPYILKVHIKLNSPRRSTFPFQWADSNYARRTRFVEPASFSTLSVSDRGKRLSFSNDRALNPSISGTEQG SLCSTQRAQGFSACSKDKHYEQSVGCVSEECNMPRMRTAKESATPRRHTIPSKIPRISSKYDSLPASYTPAGKLTPPTRR ASLPLPTTTMATTTPYRTSVGFLRSVDSPNISVNAPRIDKMAEFPLASGENIPLFPARRASSTSAQCSSGSPRSIIDCTI TKDKCTIQVVDKASVPTSGSDGGAAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLLEFSARLLQ QQRFEELGVLLKPFGQEKVSPRETAIWLTKSFKETVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 516 | 516 | 9.9E-250 | – | |
| PANTHER | 1 | 516 | 516 | 9.9E-250 | – | |
| Gene3D | 1 | 204 | 204 | 8.5E-55 | – | |
| ProSiteProfiles | 1 | 170 | 170 | 33.7 | ||
| SMART | 3 | 170 | 168 | 5.8E-22 | ||
| SUPERFAMILY | 5 | 212 | 208 | 5.53E-58 | ||
| Pfam | 11 | 169 | 159 | 1.3E-42 | ||
| ProSitePatterns | 37 | 49 | 13 | - | ||
| MobiDBLite | 307 | 331 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0170500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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