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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0179900 |
| Transcript ID | LotjaGi5g1v0179900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT2G31240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7GMN0|A0A1J7GMN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0179900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:45755524..45762365) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTTACCACTGCTACCGACATTGGTGGGAAGATGAATCATATGAACTAGGAATTTATTTTGTTGTGAAAATTATAAT ACCCTAAAATCAAATGAAATGAAACGACAACGTTCTCAAGCTTCACCACTTTATTTTCTTCTCCCCCATCTCTTTCAAAT GGAGGGTTTTGCAGAGGTTTAACCCTGTAAACTTTCATTCGTCAACATGAGAAAACTCAGAAATTCGATCGCGTTGTTCT CTCTCCTCACTCGCCAGAGCTCAAGCTCTCTCTCTCCTCTCCGTTCCAAACTGCACTGTTCCGATGCACCCTTCAACCCA CTCACCAGACCCACCAACTTTGCATTCACCCAGTTCCGAACCATTGATACCCTCGTTGAGAAACCCACTCAAATCCCCAC CAGGCAGCGCAAAATCATGGAAAGATCGCAGCTCGAGGAAGCTTTCGAGGCGGCGGAAACCACCGAGCAAATGCTCAAAG CGTTCAGGGACATGGAGGGTGTTTGCAATGAGAGAGAAATTGGGTTGGCTGCTTTGAAGATTGGACTCAAGCTTGATCGC GAAGGCGAGGATCCCGAAAAGGCTCTTTCATTTGCTAATAAAGCTTTGAAAGCATTGGATAAAGATAACAACAACAACAA TAATGCTTCTATGCCTGTTGCTATGACTTTGCAGTTGATGGGGTCTGTTAATTTTAGCTTGAAAAGGTTTAGTGATAGTT TAGGCTACCTTAACAAGGCGAATAGGGTGTTGGGTAGGTTGCAGGATGAGGGTTTTAGTGCTGGTGATGTTAGTCCTGTG CTTCATGCTGTGCAGCTTGAGTTGGCGAATGTTAAGACGGCGATGGGGCGGAGGGAAGAGGCACTTGAGAATCTTAGGAA GTGTTTGGAGATTAAAGAGATGACTTTTGAGGAAGAAAGTGGGGAATTGGGCAAGGGAAATCGCGACTTGGCTGAAGCGT ATGTTGCGGTTTTGAACTTTAAGGAGGCGTTGCCTTATTGTTTGAAGGCGTTGGATATTCATATTAAGCTTTTGGGGCAG AACTCTGTGGAGGTTGCACATGATAGGAAGCTTCTTGGGATTGTGTATAGTGGGTTGGAGGAACATGAGAATGCACTCGA GCAGAATGTTTTGGCGCAGAGGATTTTGAAGAATTGGAATCTTAACTCTGAGTTGTTGCGCGCTGAAATTGATTCAGCGA ATATGATGATTGCTCTTGGAAGATATGATGAGGCTGTTGGTACTTTGAAGAATGTTGCACAAAACACGGATAAGGACAGT GAGACTCGAGCACTTGTGCTCATTTCAATGGCAAAAGCATTGTGTTATCAGGAAAAGTTTGACGAATGCAAAAAGTGTTT AGAGATTTCTCTTAGAATTCTTGACAAAGGAGAACAGAGGACAGTGGAAGTTGCAGAGGCATACTTAGAGATATCAATGC AGTATGAAACCATGAATGAGTTTGAAACTGCAATTTCATTGCTGAAGAGGACACTTTCTTTGCTTGAGAAGCTCCCACAA GAGCAGCACTCAGAGGGAAGTGTCTGTGCAAGAATAGGGTGGTTACTTTTGCTGACAGGCAAGGTGCAGCAGGCAATTCC TTACTTGGAAAGTGCTGCTGAAAGAATGAAAGAAAGCTTTGGTCCCAAGCATTTTGGAGTAGGTTATATTTACAACAATT TGGGGGCTGCATATTTAGAGCTGGATAGACCCCAGTCAGCGGCGCAGATGTTTGCAGTAGCAAAGGATATCATGGATGTG TCCCTTGGTCCACATCATGCAGATACAATTGAAGCTTGTCAAAACCTTTCAAAGGCTTATGGTGAGATGGGAAGGTATGT GTGTTTTTATTGGTTTGACTTCATATCTTGATATTGTTACTCTTGATTTGATTCTGTGAAATATTTGTTTGAGTACTTTT ACTATCTTTTAAGAATGATACTTCATTTTGTGAGCCGTAGGGGTTTAGGTATGCAACGGAACGTGTCCTTTTTAAAAAAT GTTCAAAAATGTATGGAGTCTGGTACAAATTGATATGTATTGGGTGCCAGTTAAACCATTTTTTTCCAACAATACCACAG CTTTGCAGTTAGGATGAGGTCTCCCCACCCCCTACTTTCACTCTAGCTTTTATGTCTAGTATGCAATTTGACCCATTTAA TAAGTTTCGTTTTTCCCCTTCTTTAATATTATGAATTTTGTTCCCTTAAGAGTAAGTTTTTTTCCTTATACTATAAATGT TTTGACAATTTTTTCCCAAAATTTCATATTATATTTCTTGCTACTAATTTTATGTATTCTTATCTTCCGTGCAATTTTGC CTTGTTTGATGATATGAACTTTAATTTCCTATCTGTACATATTAATTTTTGAAAATTTATATTAACATGTACTTTAAATT TTATCGAATTATGATTTCCCTTATCTAAATCGGTACTACCTGAATCTATGCAACATAGAGTACTATAACACATGCTGTAT GTCAGCATCCTCTGTAACTCCAGTGGAAACTCAACTTTTGAATTTGCATATGATAAACTCCTGAAATTTAGTAAAGGGAA GCAGAATGCAAACGCAGAATCACAGTCGTTGATGGTATTATTCAAATCTAGATTCCAGAAAACCAGAGAATTAGAATACT ACTTCCTTCTGGCTATTTAAGTCTAGGGCCCAAAATTGGACAACAGATTTCTGCTTGTGTGGTCTGAGTTTTAGAAACGC CCAATTTGTGCACTTCCTTTCGTCTTTGGTCGGCATACTGTATCATCCCCTCCTCCCCCCTAAAAAAATTCTCTATTGTT TGAGAGGGCCCATATCATACAACAAATTTCTGCTTGTGGTCTGAGTTTTAGGAACACCCCCCCACAGCAAAGTTTCGTCT TTTGTCAACACCCTAAACCCTCTTAACCATTACTTCTACCCAACCTTGTTATAAAGTTCATTAAAGTATGACTCCAAATT TGTGTAGGAATGTGTAATGGCTGCAGCAATCCATTGGCAGTAGTAGCAGGATATTTCGGCCTCTAGCATATATCACATGC CCTGACAAATACCTTCACCCTCTCTTTCACTCTTGGCCAAAATATATTCCCAGCAAAGCAAGCCTATGGTAAGTTCGAAG GTTGCCTGAATATCCTCCACCAGGAGAGGTTTTGAAATTCTTTAAGGAACATGGGAATCATCGGTGGCCAATCTGTCTGC CTAATGTAGCACTCCTCCCTTAATAGAGTACCCTGGTCTGGCTTTGAGATTCTTTTGCAAATCATGAATGATATTTTTTT AATTAGTGGATCATTAAGAATCTTAGTTTGTATGTCTCTGCCCTGCTGCCAAATTGGATAATAAGCAATGGTTTTTAACT CCCCCTCCTCATGTTCTCTTGATAAAGTATCTTCCACTGCCACCTTATTTATCACCCTTGCTTTATGTAGCACATCGATT TAGAACCCAAGAAGCTTGATTATCTACTCTTGTTGATTTTTTGTGGTTATAAGATTGTCATGCTTGTGAATCTACATAAG TCCAGGCTGCTAAATCCGTACCCTTGAGGGAAGGAAACTCTACCTTCTTTCAATCGAAACTCAGCTAACTTGTTATTGCC CGTTGTCGATGAAGGCCCATTACCACTGTCTGAACTCCCCTGGTCATTTGTTGATTGCTTCCCAGATAGCCTATCCATCT CTGCCAACTAGACTGTTTCACATCCTCCATTCCAGTTCCAAATTCTCTTTTTGAATCTCGAGCTTCCACAGCATCCATTT GGGTTGACAGCTCTGGTGGAGTGGTGGTATGGTACGAAGAACGTAAACATTGGCCCAAATAACTGCAGCAATTCTTCTCA ACTCATTTCCTGGCAATGGCAGATGGTAGACACCAGAAAAGTAGAAAAGTGAAACCAAATGCAAAAACAGAATTACTAAT GTTGATCGTATTAATGGAATCTACAAAACCAGGTAATTACAATTATCTTACAAGAGCCAAGCTCATTTGAGAGGCTGTTC TTAGTCACCAAAACCCGATAATTCTCCACACAACGCCCTCATTCCACCACAACCCTCTATTATGATAGCTAGCCTAACTA ACTTGGCCAGCTCAGCAGATGCGTATCCCCCGCACACGACCAGCCCTCCCTTCTGAAATATACATTCCATTTGGGTGGCT TACTTAGACCAGTGCCCAACAATTTATCCTCCACTAAATCTCTTACATTATTCAGACATGGGTTCCTATCAGTAAAGCCG CTTTCCTCTCTCCCTCTCTCTCACTTATAATAGGAGTTCTCTTAGTAGTTGGATAGTGCACAGTTTTATTCTTCATATAT TATACATAATTTGATTGATGAAATCCTTGAGCATGGGTCTTGAGTATAAGGAATTATGCCCTGAGCCCATATTTGCATAT GGAAATGCTACAAATATAGATGCAACCAAAGTTGCTGAAGTTTCTTCCAAATTTCATGATTGAGTTTAATCCATTGAGCT CAATTGCTGATGTTATTTTACTTGCAGTTGACAGTACTTTTAAGTAAAGCTAATATATGCATGATCTTATCATGGGAATT TCTATTGGAATTTATCCTATATCTGCACTTATGTTTGCCACCATCTGCATGTGTTATTCCATATTTCTGCAAGTAATACC CATGTAGTTTCGCTTGAGTCAATGTAGTAATTAAGAAAGCAAGGATTGTTATTCTTAACTCTTAAGCTATAATATCAGCA TTCAATTGTGTATATATACATATATATATATATATATATATATATATATATATATATATATATCCCTTTCTGCTACTGAA TGACATTCTATAATTTCTCTTGGAATTGCAGCTATGTCCTTGCAGCTGAGTTTCAACAGCAAGTTATTGATGCTTGGGCA AGCCATGGAGCAAGTGCAGAAGATGAACTTGGAGAAGCCCGCCGACTTCTTGAAGAGTTAAAGAAAAAAGCCCGCGATGC CTCTGCAAATGTTCCTATGAAGGCTTTGCCCTTACCTTATACACCTGAAGCATCCAGGAGCTCCCAGCCTGACATACCAT TACAGAAGCCCCGAGCAGTTTAGCAGTCTTCTTTCATATTGTCATTGCAGATTCTAATCAATATTTATAGCACTGGTAAT TCGTTTGCTGGTTTTGATTTCCTCACAGATTTATCGAGTTAATTAATTCATATTTTTAGGGTTTCCACTATATTAATCAT ATTTTTTTCTTTTGTATTCTAAATCAGTACTTGGTTTTTGTCATTACATATGGGAAATATGGAACTTCTCATTGATTAAT ATAATACCTCCCTTATTTGTTTCTAACCTTGTTGCAAGCTAGTGGCATTGTTAGTTATTGTGCAATGGAAGAGATACTGT GTTGAGTATATCACTGACTTGTGTTGTTTATCTTCCTACTTTGTTAGAGATTCCCACATACCAATAGGTAGTCACAACTC ACAAGTCAACTAAGTAGAATAGCTGTAGTTAGAAAAGTTAGTTGCTTTATTCGTAAGGTTTGAAGGAATGAAGGGGTATA GCAAAAATAGGAGGCTAAAGGAGAGGCGATTCAGATTTTTTACTTTGGAAAAGAGCTGTGACTCAGTTGTAAAAGGAGAA AACATTGGAGGAGAATTCATTCCCCTATCATCTGTATTCATTAAGATTGTTCTTTACCTTTTCTTCTATCAATTTCTCAT TTTTCATTTCCGGAAAAACCGAAACTAGCTTGCACATGTTCTATTGTATGATGATTATTAACCTTTAGAGATGGCAAGTT CAAATTTGAAGTTTGTATGATGTCCTTGAACTTTGTTCTTTTATAGCTATATCAGTTTTTGGCTTTGTAAAGCCAATGCC CCTCTATATATTCGGTTGTGTACTTGAAATTTCACTTGCCTCTCCTTGCGTTTTCCCTGGGCTTGCCATGTATAAGTGGT TTAGGCTCTAGGGAATGAGGAGAATAATAGCATGTGTTGTTTCTTGATTTTGATTTCTATTTCTTCTAAGCTGCTGCTCA ACAAGGTTTCATATAGTGGGGAGGATGTCCACAATATAACATGGATGGATGAGGTACGAATCTTTCGCCATTTCAGTAAT GGACATGGACCGGTTTAAAGACAATTATTTATCAAGTCATACAAAGTCAAATATAAAAGCATCTACGACTTGGATATAAG TGGAGTCTTCTTCTTTCTACGATATATTTTTTTTTTGTGAGAGTTTTTTTTTTTCATCCATAAAATTCGAACCCGAAATG TTGCTTAGAAGAATTAAACATGTATTATTAGAACCAACCACCGTGTTGGTGAATAATTAGATTTTTCTTATTATAATATA TGTAACAATATAATGTGAACTATTTTTTAATTCACAAAATAATGTTAACCGAGTAGTAACAAGTGATAAAGAATAATTTG TCTATTTTTATGAGTAAAATAAATATTTTTACCATTTAAAATTAGTCAATTTTTTAATTAAAATTAGTGAAGGGCTTGGT CTCAAGAGTGGATTTTTTTAGAACGATCTTAGTGCATCAATGAATTTATCAGTTAATCATTATCCACCATGCCCTGAACC AAGTTTGACAATGGGAATACCGAAGCACTCAGATGCTATATAACCTCATAACCTTTTTACTGCAAGATCATGTGTGTGGC CTTCAGGTATTCATGGATGGAGATTGGATCGCTGTTGAGCCTCTTCCTCATGCATTTGTGGTAAACATAGGCTACCAATT GCAGGTACATACACTTCTCTAATAAATTAAATCTATTGAATATTTTCATGTCAATGAACTAATTAATTGATGCAATCAAG AATTCATTAGTTGAGATAGTGCTAGCACTTAGATGCTAAGTT
CDS sequence (LotjaGi5g1v0179900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAAAACTCAGAAATTCGATCGCGTTGTTCTCTCTCCTCACTCGCCAGAGCTCAAGCTCTCTCTCTCCTCTCCGTTC CAAACTGCACTGTTCCGATGCACCCTTCAACCCACTCACCAGACCCACCAACTTTGCATTCACCCAGTTCCGAACCATTG ATACCCTCGTTGAGAAACCCACTCAAATCCCCACCAGGCAGCGCAAAATCATGGAAAGATCGCAGCTCGAGGAAGCTTTC GAGGCGGCGGAAACCACCGAGCAAATGCTCAAAGCGTTCAGGGACATGGAGGGTGTTTGCAATGAGAGAGAAATTGGGTT GGCTGCTTTGAAGATTGGACTCAAGCTTGATCGCGAAGGCGAGGATCCCGAAAAGGCTCTTTCATTTGCTAATAAAGCTT TGAAAGCATTGGATAAAGATAACAACAACAACAATAATGCTTCTATGCCTGTTGCTATGACTTTGCAGTTGATGGGGTCT GTTAATTTTAGCTTGAAAAGGTTTAGTGATAGTTTAGGCTACCTTAACAAGGCGAATAGGGTGTTGGGTAGGTTGCAGGA TGAGGGTTTTAGTGCTGGTGATGTTAGTCCTGTGCTTCATGCTGTGCAGCTTGAGTTGGCGAATGTTAAGACGGCGATGG GGCGGAGGGAAGAGGCACTTGAGAATCTTAGGAAGTGTTTGGAGATTAAAGAGATGACTTTTGAGGAAGAAAGTGGGGAA TTGGGCAAGGGAAATCGCGACTTGGCTGAAGCGTATGTTGCGGTTTTGAACTTTAAGGAGGCGTTGCCTTATTGTTTGAA GGCGTTGGATATTCATATTAAGCTTTTGGGGCAGAACTCTGTGGAGGTTGCACATGATAGGAAGCTTCTTGGGATTGTGT ATAGTGGGTTGGAGGAACATGAGAATGCACTCGAGCAGAATGTTTTGGCGCAGAGGATTTTGAAGAATTGGAATCTTAAC TCTGAGTTGTTGCGCGCTGAAATTGATTCAGCGAATATGATGATTGCTCTTGGAAGATATGATGAGGCTGTTGGTACTTT GAAGAATGTTGCACAAAACACGGATAAGGACAGTGAGACTCGAGCACTTGTGCTCATTTCAATGGCAAAAGCATTGTGTT ATCAGGAAAAGTTTGACGAATGCAAAAAGTGTTTAGAGATTTCTCTTAGAATTCTTGACAAAGGAGAACAGAGGACAGTG GAAGTTGCAGAGGCATACTTAGAGATATCAATGCAGTATGAAACCATGAATGAGTTTGAAACTGCAATTTCATTGCTGAA GAGGACACTTTCTTTGCTTGAGAAGCTCCCACAAGAGCAGCACTCAGAGGGAAGTGTCTGTGCAAGAATAGGGTGGTTAC TTTTGCTGACAGGCAAGGTGCAGCAGGCAATTCCTTACTTGGAAAGTGCTGCTGAAAGAATGAAAGAAAGCTTTGGTCCC AAGCATTTTGGAGTAGGTTATATTTACAACAATTTGGGGGCTGCATATTTAGAGCTGGATAGACCCCAGTCAGCGGCGCA GATGTTTGCAGTAGCAAAGGATATCATGGATGTGTCCCTTGGTCCACATCATGCAGATACAATTGAAGCTTGTCAAAACC TTTCAAAGGCTTATGGTGAGATGGGAAGCTATGTCCTTGCAGCTGAGTTTCAACAGCAAGTTATTGATGCTTGGGCAAGC CATGGAGCAAGTGCAGAAGATGAACTTGGAGAAGCCCGCCGACTTCTTGAAGAGTTAAAGAAAAAAGCCCGCGATGCCTC TGCAAATGTTCCTATGAAGGCTTTGCCCTTACCTTATACACCTGAAGCATCCAGGAGCTCCCAGCCTGACATACCATTAC AGAAGCCCCGAGCAGTTTAG
Protein sequence (LotjaGi5g1v0179900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKLRNSIALFSLLTRQSSSSLSPLRSKLHCSDAPFNPLTRPTNFAFTQFRTIDTLVEKPTQIPTRQRKIMERSQLEEAF EAAETTEQMLKAFRDMEGVCNEREIGLAALKIGLKLDREGEDPEKALSFANKALKALDKDNNNNNNASMPVAMTLQLMGS VNFSLKRFSDSLGYLNKANRVLGRLQDEGFSAGDVSPVLHAVQLELANVKTAMGRREEALENLRKCLEIKEMTFEEESGE LGKGNRDLAEAYVAVLNFKEALPYCLKALDIHIKLLGQNSVEVAHDRKLLGIVYSGLEEHENALEQNVLAQRILKNWNLN SELLRAEIDSANMMIALGRYDEAVGTLKNVAQNTDKDSETRALVLISMAKALCYQEKFDECKKCLEISLRILDKGEQRTV EVAEAYLEISMQYETMNEFETAISLLKRTLSLLEKLPQEQHSEGSVCARIGWLLLLTGKVQQAIPYLESAAERMKESFGP KHFGVGYIYNNLGAAYLELDRPQSAAQMFAVAKDIMDVSLGPHHADTIEACQNLSKAYGEMGSYVLAAEFQQQVIDAWAS HGASAEDELGEARRLLEELKKKARDASANVPMKALPLPYTPEASRSSQPDIPLQKPRAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 5 | 607 | 603 | 0.0 | – | |
| PANTHER | 5 | 607 | 603 | 0.0 | – | |
| Phobius | 7 | 15 | 9 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 619 | 599 | - | – | |
| Gene3D | 66 | 186 | 121 | 3.0E-6 | ||
| SUPERFAMILY | 77 | 229 | 153 | 5.06E-6 | ||
| SMART | 152 | 185 | 34 | 310.0 | ||
| Gene3D | 187 | 318 | 132 | 6.8E-15 | ||
| SUPERFAMILY | 193 | 344 | 152 | 1.96E-15 | ||
| SMART | 200 | 233 | 34 | 1.5 | ||
| ProSiteProfiles | 200 | 233 | 34 | 7.475 | ||
| ProSiteProfiles | 200 | 233 | 34 | 7.198 | ||
| Pfam | 203 | 237 | 35 | 3.6E-4 | – | |
| SMART | 242 | 275 | 34 | 47.0 | ||
| Pfam | 247 | 280 | 34 | 0.0018 | – | |
| Gene3D | 335 | 591 | 257 | 2.3E-29 | ||
| SMART | 362 | 395 | 34 | 20.0 | ||
| SUPERFAMILY | 400 | 547 | 148 | 1.04E-18 | ||
| ProSiteProfiles | 403 | 436 | 34 | 8.821 | ||
| ProSiteProfiles | 403 | 519 | 117 | 9.732 | ||
| SMART | 403 | 436 | 34 | 16.0 | ||
| SMART | 444 | 477 | 34 | 26.0 | ||
| Pfam | 454 | 512 | 59 | 1.1E-9 | – | |
| SMART | 486 | 519 | 34 | 170.0 | ||
| ProSiteProfiles | 486 | 519 | 34 | 6.048 | ||
| SMART | 528 | 561 | 34 | 130.0 | ||
| Coils | 562 | 589 | 28 | - | – | |
| MobiDBLite | 583 | 619 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0179900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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