Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0190600 |
| Transcript ID | LotjaGi5g1v0190600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat domain protein, putative; TAIR: AT3G23280.2 hypothetical protein; Swiss-Prot: sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35; TrEMBL-Plants: tr|A0A072VLQ0|A0A072VLQ0_MEDTR E3 ubiquitin-protein ligase XBAT35, putative; Found in the gene: LotjaGi5g1v0190600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48320068..48325650) extracted from Lotus japonicus Gifu genome v1.2.
CATAAGTCCTTCACCGAAAGCGTCCATTTCCTTCATCCCCAAGAAATAATTAACGCGAGTTTTGTTTGGAAATAAGCATT TGTCATAATCATTTCTTGCATAATTACACTTTTACCCCCACACTATCCCCAATTATTGTCCTTCTTCACTTCCAATTTCC CCATTTTCTCACTACTTCACATTTTCCAGGAAATTTCTCTGATTTTCCTGGAAAATCATTTTATCATTCAATTCAATTCT ACCTATTTTCCCATTTCATACCCAAAAAAAAATCAACTTCTCATTTCCTGTGAAATTTTATACATAAAGTAAACCAAAAA AAAATCCCAAAATTTGGTTGGGAATTCGTATTTACCTGATGGGGCAAGGACAATCCAAAAGCGAGTTGCTCTACCAGCAA GTCAGTTATGGGAACTCCGAAGGAATCAAAACCCTTCACAGAGAAGGTGCAGGCCTTGAGGTAAATCAACTGTACCAAAT TTTCCATGAAAAATGTGATTTTTCATCATCATCATCATCACTATTAAATTATATGTATTTGGCATTATTATTACTTTTTA TTAAGGGGGTGATGATTTTGGATTTGGATCCATTGGTTTTGTTGTTGATTGTGATAAAAATGTTTTTTTTTTTGATGCAG TGGATGGACAGAGAAGGGAAGACACCTTTGATTGTTGCTTGTATGAATCCTGAGCTTTGTAATGTTGCTAAAACTTTGAT AGAACTTGGAGCCAATGTCAATGCTTATCGTCCCGGTATTGGTTACTTTCTAGCTTGTTATGGTTTCTGGCTTTGTATAT TAGCTTATGGGGAAGTGATTTTAATTTTGAATTGCCAATTTTCCATTGGATAAAACTTGATAATTTGTAGCATAAGTAAC CCCAGAAGTGTCTGAAAAGTGAAAATGAAGTAACCGAGTTGCCTAGTTTTAGTTTTAGATGTTTGCATAGACTGTAGATT TCTTAGTTGAGATAGTTGTTCGTCTCTGCTGTTATACTTAATTTGTCTGAATAAGTATTGTAGTGGAAATTGAAAAATGA AGCTGATTTTTATTTTGATATTTTCTATTTGCTTCATTGATTGCTTTCAACAATTGTGCAGGACGTCATGCTGGGACTCC ATTGCATCATGCAGCTAAAAGGGGCCTTGAAAGTATTGTTAAGTTACTTCTAGCGAGTGGAGGTATGTTCATGTGTCCAT ATATCTGCAAAGATGTGCCTATTTTCAGTCATTTGAATTTTGGAAACTCCAATGAATGTTATTTATATGGGGTTTTGCTG CTCAACTTTTCAGCCAATCCTTTGGTCTTGAATGATGATTGTCAAACTGCTCTTGAGGTTGCCAGGGCTAAAGGACACAG CAATGTTGTTCGGGCAATTGAGGTAACATTTAAACTTTTGGAATTTTATATCATCCTGTTGCTACATCAAGTTAAATGGG CTGTCTGTTTTCTCCTTCTTCTCTATATCATGACACCTGAAGTACCTAACTTATTCAAGTGACGATTATTGTTTTGCAGA GCCATCTATGCTTGTTCTCCGGTTGGTTGCGGGAGTTTCATGGACCTGGGTTTCTAGAAGTTGTAGCTCCGCAGTTGGTA TCAAGAAAAGTGTGAGTATCATGTGACATATTGTTGAAGCATCTCAGTTCACTTCTGCATTTGCTATTTTATTTCTAGTT GTTCTAGCTTTATTGCTAGATGATTGGGTTTACATCCAGACAACTTGCAATTTAGTATTTACTTTTTGCTAAGGAGGAAC TTTTAGTAAGACATTTGTGATTATGCTCATCGATTAATCTTCTTTGCAGTTGGGTGGCTGTTTTACCAGTTGGCTCCCGT AATCTTACCCGACCTTACAAGTTGGAGCTTGCCGTGTATTCTTCTTTGCAGGTATTCTTACCATTTAATCGTTCTTTCAC ATATCACACGCACCAAGAGAAATAATAATTAAGTTCCATTAACAAGAAGATGTTTGAGCTACTACCTTGTTTTACTTTTC TTCGAAGAGGAAAAAATTTTAGACTATAATAGGGACATTGAAATGCTTGTAACTACTGGTGTCTGTTTACCTTTGCAAAT AACACATAAGACTTGAATTGGTGCTTTTCTAGTTTCTGGATATTTCCCTCTTCATCATCTCTATTTACATGTACTCTGAA AGCATATGAATATATAATTAAATGAGCAGGAAGCACAACCACGGACAATTATTCCTCTGTGGAAAGCCAATTTGGAAGAA CCAAAGCTTCACCAGTCTGATCCGTCGGTGACAATCGCTGATTTCACTTCAAGTAATCTCCTATACTGAGTTTTTTTTCT CTTTTCCTGAGTGTCTTCATTTTTCTGTTTTTGTTACCCATCCCTTATCACGGACCTTTGGTATTTTTTTTTTATATCAC TTGAAAGTAGTAGATATACTTGTCAACTTGTGTATATTTAAGAGAAAAAATAGTGGTGATCAGAGTAGAGGAATATAAGG GAAGTTGAGATAAAGATAAAGTACTGGAGTCTGGGTATTTAGAAATCTCAATTATATAATTCTTACATTAGATTTTCTTT TATAACCATATACTTTTTTATTTAACAATATTTGAACTCTACAATTTAAAAAAAAATGTGACAAGAAATGAAGATTGAAA ACTTCCTTGCTTTTCCCTAAAATCCAGAAATATATGCGAGCGGTCCTTCAATGTGTATTGTTGAGTATTACACTCTACTC CAAAGTTTTAGTAAACTCGTGTCTAGTGATGTAAGAGATTACATCCTTCAAAAATTTCTATAGAAAATAGATCCTAGTAC CCAGACATAATTGAATGTCTTATTCATAATCAACAATCAGCATAACAAAGTAATAGATTGAAAAACATATCTCAAACAAG ATCCAACTGTTATATTATACTAGCCCAGTACTTAATAGTTTTTCGTCATTTAACTAAACAGAAAAAATACGGAAGATATA AAGCCTATGCATGTTACATAATGTAGGCGACTCCACCGAAGGACACAACAAAATCAATGAAAGCTGTGTTTTTTGAGGCC CAAACCATGTGCCAACCCAAACTTGAAAACTCACTTCTATAATCTAGAGTTTACTGAATTTTTTCAAAGTTCACTTGAAC TCGAGCAAGTTTGACTATCAGCGAGTTTACATGCAATTTAGTAGAGTCTATTTTTTCCCTAGGATCATAATTTCGGTAGA GTTTGACAGTGACAGCATGGTTTTCCATAAAGGAAATGCTTCCTTCCTTCCATCTTGACTGATTTTTATTCTGTTAATTT CTGTCTGCCTCTTTCCAGGAAAACGCTTTAAATTTGGGCCTGCAAGTGAGAATGATAGGCAACAACTTACATGGTTTTCT AATGCTTGCAAAGGAATTCCGCAGGTTTGTCACATGCCATGTACACTTATGTTATTCTGTCTGTAAATTTTGTTTTAAAG TGTAACTGTATAATCTCTCCTGTGTTTTCTTTGGAATATTGTGCTTAATAGTTTTCTATATGTTGTTATTGATCTAAGGC ACACCCATCAACCAGAAAAAATGGCAAACAAAGAATTCCCATAAGTTGAGCAAGTGCCATAGTTCATGACTCATATCTTG ACAAAGAGCCTTGTATGGTCTATGAGATCCTACACACCATGAATAGTAGTTCTTTTAAGTTTTAAGCACCACATTACTAA TAAAAGACTTGGCAGTAGAGGGAATTTTGGACTTCACAATGGGGTTTTATCTTAGATGGAAAGGAACCGTATTGAAGCTC AATGAATAAGTTAGAAACTGGGAAAAAGATTTTTCTCAAAAACAGCCCAAAAGTGTAAAAGGAAAAAACAACAACCCTGC AATATGAATTTTCAATGATATGCTACTGAAGTTTTGGGTTTTGAAGATACTTTGTAAATTAGCAAATAGCCTAATTTCTC ACTGTCCTTGTGTCGTGAAAGAGGGAAGGCGAATGTTATACTCAAAGATGGAGGGATTTTTTTCTCTCAGAAAATCAGAA TTTGTTTTGCTTCGCGATATCTACAAAATCCGTGCAATTTTAATGTAATTAACGATGAAAATTTTCTCAATCTCATTATT TTCCTGAAAACCAAAAAATGGTGCAAACATTCTGATTTCCTCTCCATCAAAATGTTGTTTTGGTTATTACTTCCTCTGGC GATTGACCTTGATTTTCTGTATCAATTCAAATCTTCAAAGCATATATTATGGCCTTCCCATTATCTTTATTTACACTATC TTCTTGGAGTGTATATTTCTTGAATCAAATTTCTAATGGTTGCTTTTCAAAATGATTAATAAAAAAATAGTTCTGATATT TTTCTTGTAGTTCTCCTTAGTTATTTGCAGCCAAGAAAATGTTTACAAAGGTTCGCAGATATTTGATGCTTTACTCCCTT GCCCATTGCGTGATGCTTTAATTTTCAATTTTTTCAGGCAAATCCAGCATTTTTGCTAAGTAATGTGACTACAGTTCCCC CAACAGCACCACCAGCTGCAGAAGATCCAGAGTTGGCTATGGCTATCAATGCATCCATTCAGCATGCCTTGCAAGAAAGG CCAACCGTTCCTGACGCCCATCCAAACATCGAAGCAAGCTCTTCAGTCAGTGGAGTGGATACAAGCAAGCATGGTTTTCT GGGTACACCAAATCCAGGCACAAATTTTAGTGAGTCTGTACATGAAGCTAACACAGGTGTCAGTGTTTCAGCTGGCCTTC CTAGTGGTCTGGATTTCAATCCATCGGCTCCTCCTATTAATGATGAAATTCCAGTAGATGGCCCCATTCATTATCCATCA ATCGATTTAAGCCCTCTGGATATATCATCATCATCTTCAGCTGTTGAGAAGCTACCTGAAGAAGGACAAAGTGCTGGTGA AATCGGTTCAACATGCGTGATATGTTTAGATGCTCCTGCAGAAGGGGCATGCATACCTTGTGGCCATGTTGCTGGATGCA TGTCTTGCTTGAACGAGGTGAAAACAAAGAAATGGGGTTGCCCTGTGTGTCGAGCTAAGATAGACCAGGTCATAAAGTTA TATCGTGTTTGAGATTCAAAACACTGTCGAGAAGCCTGCAATGCCCTTGCCTGTTGCATGAGAGTAGTAACATATGTTTA TCAAGAAAAATGAAAATGAATTCCCAGTGAAAATTTGTTTACAGCTTGAGAGATGCCAAACAGAAAAATATTTATACTAG AATTATCCAGATCCCACATGGGGATTTTGTGAATAGGTTGATTTCATATGCTTCTTTCTGAGTACTTGTGGGTCCAAATT ATCTCTTCTGGAAGGTAAATTGTGTCTGGTGTAAGTTATTGATCTCAAATACACTGCTTAGACTCTGTAAATTGTGGAAA TTCTGAGGTCTGAAGACTCGGAGGTTTTGTTTTCAAACACATGAAATTTGATGTGCCCTACTAGATATGCATTGCATTCT TTAATTAAAGTTTAAAAAAGATTAAAACACCACTAACCATTTAATCTCTTCGCCATCTTCCTTTTCTTCACAGCTACAAC TATCGCATTCACAAATCTAGCACATCTTCACAACTAATGCATTCTAGTTTGCATTTCAAGTTA
CDS sequence (LotjaGi5g1v0190600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCAAGGACAATCCAAAAGCGAGTTGCTCTACCAGCAAGTCAGTTATGGGAACTCCGAAGGAATCAAAACCCTTCA CAGAGAAGGTGCAGGCCTTGAGTGGATGGACAGAGAAGGGAAGACACCTTTGATTGTTGCTTGTATGAATCCTGAGCTTT GTAATGTTGCTAAAACTTTGATAGAACTTGGAGCCAATGTCAATGCTTATCGTCCCGGACGTCATGCTGGGACTCCATTG CATCATGCAGCTAAAAGGGGCCTTGAAAGTATTGTTAAGTTACTTCTAGCGAGTGGAGCCAATCCTTTGGTCTTGAATGA TGATTGTCAAACTGCTCTTGAGGTTGCCAGGGCTAAAGGACACAGCAATGTTGTTCGGGCAATTGAGAGCCATCTATGCT TGTTCTCCGGTTGGTTGCGGGAGTTTCATGGACCTGGGTTTCTAGAAGTTGTAGCTCCGCAGTTGGTATCAAGAAAAGTT TGGGTGGCTGTTTTACCAGTTGGCTCCCGTAATCTTACCCGACCTTACAAGTTGGAGCTTGCCGTGTATTCTTCTTTGCA GGAAGCACAACCACGGACAATTATTCCTCTGTGGAAAGCCAATTTGGAAGAACCAAAGCTTCACCAGTCTGATCCGTCGG TGACAATCGCTGATTTCACTTCAAGAAAACGCTTTAAATTTGGGCCTGCAAGTGAGAATGATAGGCAACAACTTACATGG TTTTCTAATGCTTGCAAAGGAATTCCGCAGGCAAATCCAGCATTTTTGCTAAGTAATGTGACTACAGTTCCCCCAACAGC ACCACCAGCTGCAGAAGATCCAGAGTTGGCTATGGCTATCAATGCATCCATTCAGCATGCCTTGCAAGAAAGGCCAACCG TTCCTGACGCCCATCCAAACATCGAAGCAAGCTCTTCAGTCAGTGGAGTGGATACAAGCAAGCATGGTTTTCTGGGTACA CCAAATCCAGGCACAAATTTTAGTGAGTCTGTACATGAAGCTAACACAGGTGTCAGTGTTTCAGCTGGCCTTCCTAGTGG TCTGGATTTCAATCCATCGGCTCCTCCTATTAATGATGAAATTCCAGTAGATGGCCCCATTCATTATCCATCAATCGATT TAAGCCCTCTGGATATATCATCATCATCTTCAGCTGTTGAGAAGCTACCTGAAGAAGGACAAAGTGCTGGTGAAATCGGT TCAACATGCGTGATATGTTTAGATGCTCCTGCAGAAGGGGCATGCATACCTTGTGGCCATGTTGCTGGATGCATGTCTTG CTTGAACGAGGTGAAAACAAAGAAATGGGGTTGCCCTGTGTGTCGAGCTAAGATAGACCAGGTCATAAAGTTATATCGTG TTTGA
Protein sequence (LotjaGi5g1v0190600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQGQSKSELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNAYRPGRHAGTPL HHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIESHLCLFSGWLREFHGPGFLEVVAPQLVSRKV WVAVLPVGSRNLTRPYKLELAVYSSLQEAQPRTIIPLWKANLEEPKLHQSDPSVTIADFTSRKRFKFGPASENDRQQLTW FSNACKGIPQANPAFLLSNVTTVPPTAPPAAEDPELAMAINASIQHALQERPTVPDAHPNIEASSSVSGVDTSKHGFLGT PNPGTNFSESVHEANTGVSVSAGLPSGLDFNPSAPPINDEIPVDGPIHYPSIDLSPLDISSSSSAVEKLPEEGQSAGEIG STCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 454 | 454 | 1.1E-185 | – | |
| PANTHER | 1 | 454 | 454 | 1.1E-185 | – | |
| ProSiteProfiles | 6 | 128 | 123 | 26.868 | ||
| SUPERFAMILY | 9 | 133 | 125 | 3.81E-25 | ||
| Gene3D | 9 | 132 | 124 | 2.8E-27 | ||
| ProSiteProfiles | 39 | 72 | 34 | 10.259 | ||
| SMART | 39 | 69 | 31 | 0.012 | ||
| Pfam | 60 | 116 | 57 | 7.5E-8 | – | |
| ProSiteProfiles | 75 | 107 | 33 | 11.915 | ||
| SMART | 75 | 104 | 30 | 0.014 | ||
| Gene3D | 379 | 453 | 75 | 3.0E-15 | ||
| Pfam | 401 | 448 | 48 | 4.3E-13 | – | |
| SUPERFAMILY | 402 | 448 | 47 | 5.3E-10 | – | |
| SMART | 403 | 441 | 39 | 0.0014 | ||
| ProSiteProfiles | 403 | 442 | 40 | 11.235 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0190600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…