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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0196700 |
| Transcript ID | LotjaGi5g1v0196700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SET-domain protein lysine methyltransferase family protein; TAIR: AT3G56570.1 SET domain-containing protein; Swiss-Prot: sp|P38222|RKM3_YEAST Ribosomal lysine N-methyltransferase 3; TrEMBL-Plants: tr|V7BDL1|V7BDL1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0196700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:49244718..49250200) extracted from Lotus japonicus Gifu genome v1.2.
CCCGCATAGGTTGAATCCTCAACATTGGTAGTAGGAGTGGAAACTCCAAACCTTAAACTCACTCACAGTGACAGTGTTTC TCTCCAGTCTCCACCTATGGCTACCAGGTACACATGCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATAT ATATGTACATGGAGCATGCATTTTCTGTTTCTGAACTCTCTTTCTCTCTGCTTAGGCGTTTGAGGGCATTCAAGCGATGG ATGAAGTCCAATGGATTCGAGTGGAGCGACTCACTGGAGTTTGTGGACACCCCAGAAGAGGGAATAGCTGTGAGAGCTTT GAGCCAGTTGAAGGAAGGTGAGGTTGTGGCCAAGATGCCAAAGGAAGCTTGTCTCACCATCAAGACTAGTGGGGCAAGTG AGATCATTGAAGGTGCTGGTTTGGGTGGTCATTTGGGATTAGCAGTTGCCATCATGTATGAGAGAAGCTTGGGTGGGGAC TCACCCTGGTATGGCTACCTTCAAGTCTTGCCTCAACAAGAGTGCTTGCCTTTGGTTTGGACCCTCAATGAAGTGAATGA CCTTTTGTGTGGTACTGAGCTTCACCAGGTATACCTTATATATATTGTAGAACTATACTAATGTTGAGGGATGGAATAAA ATTGACCATATAGAATTATGACAGTATATACTTTGGTCTGTTGTTTGCTAACAGATAATGGCATGGTGATAATGCTTGTT TCTTGAATGAGTTTTCACATATTTTTTTGTCTTTAAGTGTGTTTGGATTGACGCTGTCATAATTGATTTTGCTATAATTG ATTATGGTAGAAGTGAGTTGAAAGTTAAGCGATCTATGTTCGGATAAATTTATGAAAAAGATGACTTTCTTATGGAAATG TTTGTCTAATCCAATTGTAAAATCTCATAATTGATTATGTCCAATGCAAAATCTACTCTCTCCAGCTTCTATTAGAATTG ATTCAAGTAATTCTTCAAGATGACTCCCAAACATCTATATTGTCATCCAAAAGTGATTTTACTTAGTGAGAGTTGATTAT GAGGTTCACCACCAGGGAACCAAACACACACTAAGTATAATTAATTCGGCTCCCTATGAATGCCTTGTTTTTCTTTTGAT TTGTGTGTTCCAGAGTCCATTGGAATCTTATATTTTGAATGCTGTCAAACAATCTTGTAGTTTAATTACTGTTCTTTATT TGCTATGGCTGGAGTTCATTTGAAATCTGCATTATGTTATATTTCATAATTAAGTCCATTGAAAGGGAGTTTAAGCATTT TAGAAAAGAAAAGGATACATATTAATTACCTTATGATGCTTATTGCTGACTGAGAGGGAAATAAACCGAAAGAATATCAG AAAAAATTGAGTGGCACAGTATATAATTTTCTATTTATGACTGTTCTTTTAGTCCTTGGGACTAAAGTTGAATATAGTGT TTCAAAATACAAAACTATGTGCTTGTCCTTTCATGGAGATTTCTGATCTCTTGCCATTGTAGGCAGACAGTGCAAGAAGA CAAAACTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCTCTGTTGGATTTAGCACCTTCAGAGCTTAACCCAGAAT TCTTTAGCGTAGAACAATACTTTGCAGCCAAAAGTCTTATTACTTCGCGAGGTTTCGAGATAGATGATTACCATGGTTCT GGCATGGTCCCTTTAGCAGATCTGTAAGTAAAGCCTCTGGTGATTACTGTGGTTTTATTTTCCAGGTTCAGATTACCATT TATTTGCTATTTATTACCCTTGTTAAAATACAAGTTCGTAGATGAGTTTAAGTCTTTAAGATGCTCTTTTCTGCCAACTT GACTCCCAAGATCTCAAACATGCATGATTTATTCATTTCAGTTGGTTGCTCAATTTCATGTCAGACTACCATTCAGATTC CCTTTCTAGGGCAAAGCAAGCACAACTGGATAACAGTTATCATATATATGCTGTTCTAACAGTTATTTTAGTCTATGGGT GTCTTGTTTTAGTTACTTAGCATTTCTAATATACATGTAAAATATTCCCTGATGTTAATCAAATCTATAACACCCCTATT TTTCCTGGATGAACCATATGCTGCAAATGTAAAATGAGAATGTTTTTTGTCTAACCTTTTTGGGGTAGTGACTTATTTGA GTTTAAATTGATCTTGTAATTAATTTAAACTTATGAGTAAAAAAATTCCTTGAGAGACTGTGTGTCGGAAACTCTTATCT GCATATAGTGATATTATATGTTTATATTCCTGATCTGAAAGCTATCATGCTCTAAAGATGTCTATACCGTCCTTTGCTCT AGATTCAATCATAAAACGGGTGCGGAAGATGTGCATTTTACTGCTATGCCCTCTAACTATGATGCTGACGATGATGTTGA TGAGGGCATTGTTGATGAAGAGTTGGCTGAAAATTCCTCTGTAGATATGTCTGAGTTAGAGCCTGCTCAAGTAGGTAACT GCATTGGTAGTGACTCGGAGTGTTCTTCAGTTACTGAGGGTGATGCTTCAATACTAGAGATGATTATGATAAAAGATGTC AGCAGTGGAGCTGAGGTACGGATTTTGCTTCATGTTATGTGGGTTTTCTTTACTCTCATAAGTCTTGCCTAGTTTCATAG AAATGAACCTTAGAGTAGTGTATGTTTATTTATTTATATCCTATTTATTGTTTTGGAAACATGGTTCTTGTTTCATTTTG AAATTTTCAATGACCTCCTAGTCATGATGATACTCTTCATTCAATATATTACATATAATTATCTTTGACGTGGTGATCTC TTATTCTTCCATTGGAGACACTTTAATACTCAGGGGTAGAGAACTTGGTGACTAATTGGCTAGCTGTAAGCGCACCAATC GTTATTAGTAATGCAATGGTGGATATGAGTATCGTCCCACAGGTATTAGAAACTCAACAAAGATATCACTAGTTGAATCA AACAATAAACAAAGGTTGACCTCTAAAACCAGAACTAAATTGTAAAATACAAGAGTTAAATGTGAAACCATGAACTAAAA CAATATAAAGTGCAATAAAACTGTAGAACAAATTATTCAAAGAGGTTCTATAGAAGTTAGGGCTAGAATCTCTAAAGCTC GGGTACCCTGTTTTTGGCCCCATACACGTACTATATGCCCTGCTTACGCGGTGGGTATGTACCAGATTTAAATTTAAAAA ATTTATTGGGTACTTTGCAGGGTACTCCTTGGGTACTTTTAATCTAAAACCACGTCCTTTTGTTCACTTTTTTTAAAACC CTTTTCTTAGGGTTTCCTACCCAAAGACAGACCCATGGGCCCCACACAATCTCACACCGCCATTGTTTTCCTTTGCTTCC GGGGCCTTTGTCCTCCGTTTATTGGACCTTTGCCATCCCCTGTCCCGCCTCCTCCTCCTTCTCCTTCAATTTCTAAAGTG TTGTTCCTCCTCCACTGTGATGCTCTCGGTTCAGTGTTGATAATTCTTCTGCCATCAGTCGTTCTTCGTCATTGTTAGGG GTGAAAATAGGCTGAGCTGAGCTAGGCTTTGTGTAAATATGTCCGACCTGCTTAAAAATTCGAGGTCTGAGTCTGGCTTG TTATCTGTCATAAGCTTTTTCTAGGCTTAGCCTGATCTTCTAGACAGCCTGGTCTGACCTGCCAGCCTATTTAAAGGCCT GTTCCATAATGAGAAACTAAGTAGACCAACAAACCTATGTTTAAATAGACCAACAAACTTATAGGCTAATGAACTAAAAT AGAATAAAATGAAACTGTTCATAAATACGCTAACATGATTATATATATGTTAATAAATAGAGTGAGAATAAATGAAGTTG TGTTTGACTTATTAAGACCTGAAAGCTTATTTAAAATGTTACCTCATATTGAGGTATTTAAGGGTCCGGCTCCTCTAAAG TGAGTAGTGGGTAAAATAAGCATGGCAACCATTGATTGAGTTATTTATTGACTTTATGAAAGCAGCAGGTAATCACTGTT AATGGTTTTGATGCTTACTTTACCCTCTAAAGTGAGTCAGCCAAATCTGGTATTTAAATAGGTTATAAGTTCATTTTTAC ACTTAAATCATTACCGTGTTTAAGTCTATGAATATGTCAATACCTATATAATTTCAAGATATTAAAATAGAAATATTATT TACCAATAATAATAATAATATGTTAAATCTCAGTACAATGTAGGTGGGCTTGTGCAGACCCACACTTCATGCCAAATGAG CTCTTCGGTGATGAGAGTGTTAGAAATGCAATATAAAACCATTCACATGTCTTCATTCAATAGCTTGAGCTTTTGGAATT GTTGATTCATGAAAAATTAAAGTAGGAAATTACCCAATTCTTCCAAATGCACATAAATTTCTATTGTTGAGACCACAAAA ATCACTATCTAATTCACTAAACTCTTAGCAAAATTATGTCACTCATTATGGGTTCCTCTTGCCACTCAGGTGTTTAATAC TTACGGGATAATGGGTAATGCTGCTTTGCTTCACAGATATGGATTTACTGAACAAGATAATCTATTTGATATTGTGAACA TTGATTTGGAGCTGGTACTTCAATGGTGTTCGTCTTTGTTCTCCGACCGCCAATGTAGAACAAGAGTCTCCCTTTGGAGA AGGTTAGGCTATTCTGCAAGTGACAGTGAAAACTCTGAATATTTTGAGATCTCATTTGATGGAGAACCACAGACTGAACT CCTCATTTTATTATACATCATGCTATTACCAGATGATGCCTACCATAAGTTAGACCTATCAGTATCAGTTGCTGGAAATT GTCATGAATCAAGTGAAACAAGTCTTTCTAATATGAGCAAGAAATCTGTGCTGACTAAAGAAGTTTGTAATGCTCTGTTG TCGCTAGCCGATATGAGGGAGAGTCTCTATGGTTCAAAATCAATGGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTC AGTAAGTGAGAGAAAGCTGTATAATTCTTTGGTGCTGCGCATTAGTGAACGGAAGATCCTTCAAAAACTCAGAAGTTATG CTTCACAGTCACATAAATCTAAGATCACTAATCATAGTTCTGCAAGGAAGAAGTTGAAAAGGACAACAAAGAAAGACTGA AAGAGAGTTGATTCTTTTTTAGCATTTTTCTTCAATTTTTTCCCCCTGAGATTCTGTTACATGTCTCATTTATTTATATT TTATGACTTGAGTCTTTGGCCTATGTGAAGTAGCAAAGCTACCTCTCATTTGTGCCGTTTGGTTTTGGATCAAGCTAACA AATTTTGTATCGCTTCCTTTTGTTAGTTTTTAATGAACCGTTTGCCTTTTTATAATTTGTTGATGATCATTACTTTCTTG CACGCTCTTATTTGATATATTTTCTTCTTGCACATTGATTATTTTAGAAAAATGGTATATTGATCTTTAAAAATTCGATA TTCGAACTCGTTTTGTGTTAATCCCTATGCGAAAAGCGACAAG
CDS sequence (LotjaGi5g1v0196700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACCAGGCGTTTGAGGGCATTCAAGCGATGGATGAAGTCCAATGGATTCGAGTGGAGCGACTCACTGGAGTTTGT GGACACCCCAGAAGAGGGAATAGCTGTGAGAGCTTTGAGCCAGTTGAAGGAAGGTGAGGTTGTGGCCAAGATGCCAAAGG AAGCTTGTCTCACCATCAAGACTAGTGGGGCAAGTGAGATCATTGAAGGTGCTGGTTTGGGTGGTCATTTGGGATTAGCA GTTGCCATCATGTATGAGAGAAGCTTGGGTGGGGACTCACCCTGGTATGGCTACCTTCAAGTCTTGCCTCAACAAGAGTG CTTGCCTTTGGTTTGGACCCTCAATGAAGTGAATGACCTTTTGTGTGGTACTGAGCTTCACCAGACAGTGCAAGAAGACA AAACTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCTCTGTTGGATTTAGCACCTTCAGAGCTTAACCCAGAATTC TTTAGCGTAGAACAATACTTTGCAGCCAAAAGTCTTATTACTTCGCGAGGTTTCGAGATAGATGATTACCATGGTTCTGG CATGGTCCCTTTAGCAGATCTATTCAATCATAAAACGGGTGCGGAAGATGTGCATTTTACTGCTATGCCCTCTAACTATG ATGCTGACGATGATGTTGATGAGGGCATTGTTGATGAAGAGTTGGCTGAAAATTCCTCTGTAGATATGTCTGAGTTAGAG CCTGCTCAAGTAGGTAACTGCATTGGTAGTGACTCGGAGTGTTCTTCAGTTACTGAGGGTGATGCTTCAATACTAGAGAT GATTATGATAAAAGATGTCAGCAGTGGAGCTGAGGTGTTTAATACTTACGGGATAATGGGTAATGCTGCTTTGCTTCACA GATATGGATTTACTGAACAAGATAATCTATTTGATATTGTGAACATTGATTTGGAGCTGGTACTTCAATGGTGTTCGTCT TTGTTCTCCGACCGCCAATGTAGAACAAGAGTCTCCCTTTGGAGAAGGTTAGGCTATTCTGCAAGTGACAGTGAAAACTC TGAATATTTTGAGATCTCATTTGATGGAGAACCACAGACTGAACTCCTCATTTTATTATACATCATGCTATTACCAGATG ATGCCTACCATAAGTTAGACCTATCAGTATCAGTTGCTGGAAATTGTCATGAATCAAGTGAAACAAGTCTTTCTAATATG AGCAAGAAATCTGTGCTGACTAAAGAAGTTTGTAATGCTCTGTTGTCGCTAGCCGATATGAGGGAGAGTCTCTATGGTTC AAAATCAATGGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTCAGTAAGTGAGAGAAAGCTGTATAATTCTTTGGTGC TGCGCATTAGTGAACGGAAGATCCTTCAAAAACTCAGAAGTTATGCTTCACAGTCACATAAATCTAAGATCACTAATCAT AGTTCTGCAAGGAAGAAGTTGAAAAGGACAACAAAGAAAGACTGA
Protein sequence (LotjaGi5g1v0196700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATRRLRAFKRWMKSNGFEWSDSLEFVDTPEEGIAVRALSQLKEGEVVAKMPKEACLTIKTSGASEIIEGAGLGGHLGLA VAIMYERSLGGDSPWYGYLQVLPQQECLPLVWTLNEVNDLLCGTELHQTVQEDKTLMYEDWKENILPLLDLAPSELNPEF FSVEQYFAAKSLITSRGFEIDDYHGSGMVPLADLFNHKTGAEDVHFTAMPSNYDADDDVDEGIVDEELAENSSVDMSELE PAQVGNCIGSDSECSSVTEGDASILEMIMIKDVSSGAEVFNTYGIMGNAALLHRYGFTEQDNLFDIVNIDLELVLQWCSS LFSDRQCRTRVSLWRRLGYSASDSENSEYFEISFDGEPQTELLILLYIMLLPDDAYHKLDLSVSVAGNCHESSETSLSNM SKKSVLTKEVCNALLSLADMRESLYGSKSMEDDIEALGRCSSVSERKLYNSLVLRISERKILQKLRSYASQSHKSKITNH SSARKKLKRTTKKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 473 | 473 | 1.2E-131 | ||
| PANTHER | 4 | 472 | 469 | 6.6E-100 | – | |
| SUPERFAMILY | 4 | 205 | 202 | 1.41E-42 | – | |
| PANTHER | 4 | 472 | 469 | 6.6E-100 | – | |
| ProSiteProfiles | 22 | 284 | 263 | 10.877 | ||
| Pfam | 33 | 284 | 252 | 5.2E-10 | ||
| SUPERFAMILY | 263 | 302 | 40 | 9.81E-8 | – | |
| Gene3D | 311 | 478 | 168 | 1.3E-6 | ||
| SUPERFAMILY | 323 | 481 | 159 | 4.84E-7 | ||
| MobiDBLite | 472 | 494 | 23 | - | – | |
| MobiDBLite | 478 | 494 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Protein-lysine N-methyltransferase activity | Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate. | ||
| Biological process | Peptidyl-lysine monomethylation | The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine. |
Expression pattern of LotjaGi5g1v0196700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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