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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0197200 |
| Transcript ID | LotjaGi5g1v0197200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp|Q7Y1I7|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A; TrEMBL-Plants: tr|A0A0B2RC49|A0A0B2RC49_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi5g1v0197200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:49310776..49319025) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCTTTGAAGGGAATGCCATTGTTTCTTTTTGCATGCATAAAATAAGCACTGGATTTTGCAGGCATCCAATTCAGGTA AGGTTCGGTTTTAATTAATGGAGCTGGTGTGACTGCATACTTCTCAATTAATTATTATGCTTACTTAAGATCACTTGCAT CATTACAACTTGTATCCATTTCTATCTTTCCTGTCTATGTTGTGATCTGTTACTCATTTTCTTTGTTTTTACTTATTTAT CATTTGAATTTAATCATATCTGTCTTTCGTAATTTTTTTGTATCTTTTGACATGTGAAGTATGTTTTGACTACTGTAAAG TGAGGGATACACTTTAAATGATAAAGCAGAAAATTATAATCGTCCGATGATATATCCCATGATAGGGATATGAGCATGAT CCAGATCGCCTTGACGATATCCCATGGTGGACAGGGATATGGGCGTGATCATTAACCTTCACACTCCAGATGTCCTGGGC GTGAGGGGGATGTTAAGTCTCACATTGGCTAGAGATATGACTAATGAAATGTTTATAAGTGGGTAGGAAATCCTCAGCTC TTGAGTTAGCTTTTGGGTTGAGTTAGGCCTCCCAAATTCTAATACATGGCTTAATATACATGTGGATGTCTTTTGTCATT ATTAATCATTGATTTTTCAATCAACCGCCATCCTTTCATTTTACACTCTAAAGTGCACTTCACATTTTAGAGGAGCAAAA TCTGTGTATAAAATTGAAAGAAGTATCTTTCTCTTAGTGTGCGATTGTGTGTAGGTGCTAGTTTATGACACACACTATTC ATTTATTTACTTCCATTAACTTGCTCCCTATACTATCCATGTGTGGTATTCCTGTCTTCTTTTACTTTCTGCCTTCCTAT TTCATAGAACTCCAAAGCAAACAGGTCATATGATGTTCATAGATCTCTTTTATTTCTGTCTCATGACTGTCTCAGTTTCC TTGTGACCATTATACTGCTTAACTTTTTCTTAATCATTGCCTTGGTTTCCTTATGAAATTCATAAAAACTTACGAGTTTT CTGTTTGTTTCTATTAACTGTCAAATTAAGGGATAAGATCAACAAAAATCTGCAGTTTCCAAGGTTGAACAGTTAGTTAT GGCAGGAGATAAAAAAAAGAAGCGAAGTATGTCAGAGAGAAGTGAGCAGCTTTCCGATACCTGCAGAAACCCAAAACAAG CTGTGTCATGTGATAATTTGAAGGAGAGATCCATTTCCACATCTAAGAAGTCTTGTCTTACTGAAATAAAGAAGGATCAG GTTGTGGAAGAAGAACTGGCTGTCCTCCTGACTTCTGATCAGGATGATGGTCGTCCAAATAGAAGAATTACAGACTTTGT TCTGCATGATGAAAGTGGCACAGGACAACCTCTTGAGATGCTGGAAGTGAAGGATTTGTTTATTTCTGGAGTTATATTGC CACTTGAAGTAAGTACTGAAAAGAAAAAAGAGAAACGCATTAGATGTGAAGGCTTTGGACGCATTGAATCATGGGATATA TCTGGTTATGAAGATGGATCTCCTGTGATATGGCTTTCAACTGATATGGCTGATTATGAATGCTTTAAACCGGCTACTAA ATACAAAAGGCATTATGATTACTTTTTTGAAAAGGCTCATGCATGTATAGAAGTATACAAAAAACTTGCCAAGTCTTCTG GTGGGAACCCTGATATAAGTCTTGATGAGTTACTTGCCAGCGTAGCACGGTCTATGGGTGGTAGCAAGTATTTTTCTGGA ACTGCATTTGCAAAGGATTTTGTCATTTCTCAAGGTGAGTTTATTCATAAGCAGCTGATAGGATTAGATGTCACATCCAA GCAAAATGACAGGATGTTTGCAAATATTCCTGTGCTTGCTGCTCTTAGAGATGAGAGTAAGAAACCTAGAAACTATGTAA ATGCAACAGTAATGCCTTCAGGTGAAAGTTTAAGGATTGAAAGCAATAGTGAATTGAATTCTAGGGCTTCTGCACAGGAA GATGGGGATGCAAAATTAGCAAGGCTGTTTCAGGAAGAAGAGTATTGGCAATCAATGCAGAAGAAGAAAAGCCACAGATT AGCTTCTGCTCCTAGCAAATACTATATTAAAATTAATGAAGGGGAGATTGCCAATGATTACCCTCTACCTGCTTATTATA AAACCTCCTCCGAAGAAACAGATGAGTTAATAGTTTCTGGTGATGACTATGATGTGTATGACACTGACAATCTTCCTAGA AGCATGCTGCATGATTGGTCTTTATACAACTCAGATACAAGATTGATTTCTTTGGAACTTCTTCCTATGAAACCTTGTTC AGAGATTGATGTTACCATCTTCGGATCAGGAATAATGACTTCTGATGACGGAAATTGTTTCCATTTGGATACTGATAGCA GTCAAACTTCTTCCATTAGTTCAGGAGCACAGACTGTTGATGGACTTCGAGTTTATTTGAGTGCAATAAAAGAATGGATG ATTGAATTTGGATCATCTATGATTTCCATATCCATCAGAACAGACATGTCCTGGTATGGTGTCTCTTGTTCTGAATAAAC TCTATTTTTTTATTACATTCCTTTGATTTCAAAAGAATTAGTAATTTTTTATTTATGTTAATGCATATTAGGGATGTGGC CTATCATTTTTATGGAAATATTATTTAAAGCAATAAGACTAGAAAATTTCATTTGATACAAATTTGGAAGATCATATAAA AAAAATACTGAATTTACTCTTCTGATATGCATTAGTATGTTATCAGAATCAATGCAGACTATTATAGATAAACTAGTATA AGATCACCCAAAGAAAGTTAAAAAAAGGATACAATATAAACCGTACACTTCAATAGGTCTGGTCTCTCTCTCTCTCTCTC TTCACTTTTTTCCTGCCTTTCTTTTCACATCTCCCCACTTGCCATGCCTGTAGCTGTTATTTAGTTGCGTTACTTTCCAT GCTTACTTGAGGTGCTGATCCTCTACTTCCCCTATGCATTCTCCTAATGTACACCTTAGCATGTGGAGGTTGGCTAACAG TTTGTTGAGGAACTTCTATGTCAAACTATTAATGGAAGTTATCTGCAAACAGAAATATTGCAAATAAATTGGGTTATCTT AAGTGAATTGGAAAGCCACATAAGTGCTTTGCATATTTTACTAGTCTATACTCTATATGTCAATAAGAACTATCTCCAAC CAATTTCATTCCTTTCAGGTATAGACTCGGGAAGCCATCAAAGCAGTATGCTCCTTGGCATGCAGCAATTTTGAAAACTG CAAGGCTTGCTGTTCGTATTATCACCTTATTAAAGGAACAAAGTAGAGTGTCAAGACTTTCTTTTGGAGATGTCATCAGG AAGATATCTGAGTTTAGTCAAAACGATGTTGCGTACATTTCATCTGATCTATCAGCTGTTGAGAGATATGTTACTGTCCA TGGACAAATAGTTCTACAAATGTTTGCGGAGTTTCCAGATGAAAATATCAGAAAGTGTGCGTTTTTAACTGGTCTTATGA GGAACATGGAAGAGCGACACCACACAAAATGGTTGGTAAAAAAGAGTAAAGTTGTAAGAAAGAGTGAACTAAATCTGAAT CCTCGAGCAGCAGTTGCTCCTCTTGAGTCCAAGAGGAAAGCCATGCAAGCTACAACAACAAGGTTGATCAACAGAATATG GGGGCAGTATTACTCAAACTACGTACCAGAGGATTCAAAAGAGGAAACTGCTAGTGAATTAAATGATGATGATGAAGTTG AGGATCAAAAGGAACATGAAGACGGTGATGAAATTGAGGAGGAGACATTACTTTTGGAAGGAACCCAAAAATCACATTCA GTTTCAAAACAACCTGAAATATTTTCTGCAGACAGAGAAGTAAGATGGGATGGGGAGCCTGTAGGAAAAACAAATTCTGG ATATGTTCTTTATAAGCGCGCAATTATTCATGCAGATGTTATTTCTGTGGGGGGATCTGTGTTGGTGGGATTTGATGAAA CAGATGAGCATCCTGCCATTTATTATGTTGAGTATATGTATGAATCACTGGATGGAAGCAAAATGTTTCATGGTAGACTG ATGCAGCACGGATGCCATACTGTTCTTGGAAACACTGCTAATGAGACAGAGTTGTTTTTGACAAATGAGTGCAAGGATTT GGGACTGAGAGATGTTAGGAAGACAGCTGTTGTAGATACTCGGCGAATGCATTGGGGACATCAGCATCGAAAGGATAATA TCACTGCCAATAAAATTGCAAGGGATAGAGCAGTAGAGAGGAAGAAGAAAGGTTTACCTACCGAATATTACTGTAAAAGC TTGTACTGGCCTGAAAGAGGTGCTTTCTTTAGCCTTTCATTTGATACTTTAGGTCTAGATTCTGGCATTTGTCACGCTTG CAAATTAAAGAAAGCCAAGGAGGAGGATGTATTTGAAGTAAAATCATCTCGGAATGGTTTCCTATTGAGAGGAACTAAAT ATTCTCTTGACGATTATGTTTATGTAAGTCCATTTGAATTTGACGAAAGGATAGAGCAGGGAACTTGCAAGAGTGGGAGG AATATAGGGTTGAAAGCTTATGTTGTGTGCCAAATTCTGGAAATAATTGTCAAAATGGAAACCAATCAGGCTGAAATGAA GTCCACCCAAGTCAAAATCCGAAGGTTTTTCCGACCAGAAGATATATCAAATCAGAAGGCATACCGCTCTGATATTCAAG AGGTTAAAGAAACTGATTATTTTGAACTCAATAAAAGAATGCACAGTTTCACACAAACTATCACATGGACACATTAGTTT GTTGAAAGAGCAAGCAAACGATCACATTAATAATCAAAATGATATTATAACTGAGTTTGTATTTTTTAAAATTTCTAAGG GTTTAAAACCATTCACAATTTATTCAATTAACTATATTAAGTGAGCTCCTCTGTTTGCATGTGTTGATAAGTTTCATTGT GCATTGCTTTTATTTTGAGAGTTGTTCAGTTTCTGTATCTGGTCTGTACTGTCTAATATGTCTTAAGTTTTTATATTGAA TTAGGTTCCATGATTTATATCTTTTAGGTATACTACAGTGGAGAAACACATTTAATCTCTGTAGAATCCATATAAGGTAA ATGTGAAGTCAGAAAGAAGAATGATATTCCCACATGCAGTGCCCCTGGAATCTTCCAACATGTGTTTTTCTGTGAGCACT TGTATGATCCTGCCACTGGGTCACTCAAGAAGGTATTGTATTCTTCACCCCCTTTGAGTATGTGTATAATGTGCTTGTGA GTGCATCCTGATTTCTCCATTTGATTGATAGTTTCCAGCTGATGTCAAAGTAAGATACTCAAGTGGACATACAGTTGATG CTGCAGCTATCAAAGGAAAAGAGAATTGTAATGACGGAGAAAGAATAACAGAACCTGATAAGGAAAGAAAGACATCAAAC GAGAAACGCTTAGCAACCTTGGATATTTTTGCTGGTTGTGGTGGTTTATCAGAGGGATTTCAGCAGTCAGGTAATCTTAA ATGCGCTATTATAGCTAGAGATAGTTAGATCTACTATGAATGCATGTTTAATTTGAGTTGCTTCTCAAATGATTCAGGCA TTTCATCAACTAAATGGGCTATTGAGTACGAAAAGCCGGCTGGGAATGCATTTAAAGCCAATCATCCTGAAGCATTGGTG TTTATTAACAACTGCAACGTTATCCTTAGGTAAATTATTACAGTGATAAAATCTCCTTCCCCAAGCCTGAAAAAGTGGAA CCCATTTGTAAGTGACCTATAAATGCATTGTAATGCAGGGCTGTGATGGAGAAGTGTGGGGACGTAGATGACTGTATCTC AACATCTGAGGCTGCCGAATTAGCTACTTCACTAGATGAGAAGGAAATAAATAATTTACCCATGCCAGGGGAAGTGGATT TCATTAATGGGGGGCCTCCATGCCAGGTCCGTCTTGCTGTTTGCTTTGTTGCTATTCTAAAGATGGTAAAACTTTAGTTA GTGATTGAATTGAATAAGTCTCGTGTTCCAGGGCTTCTCTACGATGAATAGATTCAACAGTAGCAGTTGGAGTAAAGTTC AGAGTGAGATGATATTAGCATTTTTATCCTTTGCTGATTACTTCCGGCCAAGGTATTTCCTGTTAGAGAATGTGAGGAAC TTTGTGTCTTTCAATAAAGGACAGACATTCCGGTTAACCTTGGCTTCACTTCTTGAGATTGGTTACCAGGTAAAATTCTA TTACTGCATAATTTTTCCATGCAAGCATCTGCACTCTTAAGTTCAGTTGCTATGTAGAAGAATGAGAAACTAATATACAA ACACCGATTTGCTTATTCAAAGGTGAGGTTCGGTATCCTAGAGGCTGGAGCTTATGGGGTTTCTCAATCAAGAAAACGTG CATTTATTTGGGCAGCCTCTCCAGAGGATGTTCTCCCTGAATGGCCAGAGCCAATGCATGTCTTTTCTTCCCCCATGTTG AAAATTAAGCTTTCAGAAAATGTTCAGTATGCTGCTGCTCGCAGCACTGCTAGCGGGGCCCCATTCCGTGCAATAACGGT TCGCGATACCATTGGTGATCTCCCAACTGTGAAGAATGGAGCCTCTGAAATAAACATGGAGGTAAGTAAAACAGGAAAAA TGTGGATTCTATGTCAATTTACACTTAGCGAATTTGAGTTTCCCATGACTCATAAATCATCTGGTTTTGTATTGCACAGT ATCAAAGTGATCCTGTCTCATGGTACCAAAAGAAGGTTCGTGGGGACATGGCTGTCTTGACGGATCATATTTCAAAAGAG ATGAACGAGTTGAATTTGATTCGATGTCAGAGAATTCCTAAGAGGCCAGGTGCTGACTGGCGTGATCTTCCAGATGAAAA GGTAAAACTAAGTTTTGGTGTGAGATTTAAGCTTAACAATTTATATGTTTTGAGCTTACCCATTGGTTGTCACGTGTACT TGGCATAATGTCCAATGAAAATGCAGATAACATTGTCCACAGGACAAGTAGCTGATTTGATTCCATGGTGCCTGCCAAAC ACAGCTGAGCGGCATAATCATTGGAAGGGACTGTTTGGTAGGTTAGATTGGGAAGGGAATTTCCCAACTTCCATTACAGA CCCTCAACCAATGGGGAAGGTTGGAATGTGCTTTCATCCTGACCAAGATAGGATTCTTACAGTTCGTGAATGTGCCCGAT CTCAAGTAAGTCTTTAACTGGAGTTAGCTATCACTCTGAACTCAAATTCCATTATAAAAAATAAATTCCCAATAATATTA AAACTAATTACTCTGAGGATTAAAACTAATTTAGATTCAGTAGGAAGCTTATTAAATTCAATCTGGACCTGACATATTTA TTCTATTTTGAAATTCTTTTATTAAGGTTCTGTGTGGTGATGGCACATCAACTAAATCTATTTTAGCTAATCACGTGTAA TTAACCATTCGGTTTGATTTCAAAATGAGCTAGAATTAATATCTTTCTCTAATGGCAAGAAGTTTAAATCCTCCTCTAGT CCTAACTGGGTAGGTTTTAATTTGTCAGTGAGCCTCAGGATGTGAGGCTCAGTGTCAAAGATAAAATATCTCTTACTTAC TTGTCTCAGAAGGTTTCACATACAACAGTCCTAACATGCTAGGAATGTCTATAATTAACTTGTGAATGTAATATATGATA ATTTTTAGTTACAGAGCATTAATAATCCTTAATTAGGAAGCTGTGACTTGCGCCAGAAATAGTTAGATTATAAATAATCT GATTTGGTGTAACTTTTGCTTAACATCTTTCTTATTCATACATAAATCCAGGGCTTCCCAGATAGCTACCAGTTTTGTGG TAACATCATACAGAAACACCGGCAGATTGGTAATGCTGTTCCTCCTCCTCTAGCATTTGCACTGGGGAGAAAGCTGAAGG TAGCTGTGGATAGCAAGAGCAAGAGCTCCAAGTAGAAGATTGGGTTACAGGATGGAATCAGCCTTCAAAATATTGTAAAA TATCTTAGTCATGAGTCCAAACATCTAGTCATTGTAAATTGTACAGAGTCCGTGACATCCCTGCCATTCCCTGGATTACT TTAGGCTCATTTCACATCAACTTTGATGTTCATGATCAGGTGATAGTTTAGCTCTTGCAAGTGATTTGTCTCCATTATTT AAAAAAATTAAATTGTACATTTGAAGTTTGAACCATGAAATAGCTAAATTATTATATTATATAATAGACAAAGAATTCTA TCTGATTCAC
CDS sequence (LotjaGi5g1v0197200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGTGTGGGGACGTAGATGACTGTATCTCAACATCTGAGGCTGCCGAATTAGCTACTTCACTAGATGAGAAGGA AATAAATAATTTACCCATGCCAGGGGAAGTGGATTTCATTAATGGGGGGCCTCCATGCCAGGGCTTCTCTACGATGAATA GATTCAACAGTAGCAGTTGGAGTAAAGTTCAGAGTGAGATGATATTAGCATTTTTATCCTTTGCTGATTACTTCCGGCCA AGGTATTTCCTGTTAGAGAATGTGAGGAACTTTGTGTCTTTCAATAAAGGACAGACATTCCGGTTAACCTTGGCTTCACT TCTTGAGATTGGTTACCAGGTGAGGTTCGGTATCCTAGAGGCTGGAGCTTATGGGGTTTCTCAATCAAGAAAACGTGCAT TTATTTGGGCAGCCTCTCCAGAGGATGTTCTCCCTGAATGGCCAGAGCCAATGCATGTCTTTTCTTCCCCCATGTTGAAA ATTAAGCTTTCAGAAAATGTTCAGTATGCTGCTGCTCGCAGCACTGCTAGCGGGGCCCCATTCCGTGCAATAACGGTTCG CGATACCATTGGTGATCTCCCAACTGTGAAGAATGGAGCCTCTGAAATAAACATGGAGTATCAAAGTGATCCTGTCTCAT GGTACCAAAAGAAGGTTCGTGGGGACATGGCTGTCTTGACGGATCATATTTCAAAAGAGATGAACGAGTTGAATTTGATT CGATGTCAGAGAATTCCTAAGAGGCCAGGTGCTGACTGGCGTGATCTTCCAGATGAAAAGATAACATTGTCCACAGGACA AGTAGCTGATTTGATTCCATGGTGCCTGCCAAACACAGCTGAGCGGCATAATCATTGGAAGGGACTGTTTGGTAGGTTAG ATTGGGAAGGGAATTTCCCAACTTCCATTACAGACCCTCAACCAATGGGGAAGGTTGGAATGTGCTTTCATCCTGACCAA GATAGGATTCTTACAGTTCGTGAATGTGCCCGATCTCAAGGCTTCCCAGATAGCTACCAGTTTTGTGGTAACATCATACA GAAACACCGGCAGATTGGTAATGCTGTTCCTCCTCCTCTAGCATTTGCACTGGGGAGAAAGCTGAAGGTAGCTGTGGATA GCAAGAGCAAGAGCTCCAAGTAG
Protein sequence (LotjaGi5g1v0197200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKCGDVDDCISTSEAAELATSLDEKEINNLPMPGEVDFINGGPPCQGFSTMNRFNSSSWSKVQSEMILAFLSFADYFRP RYFLLENVRNFVSFNKGQTFRLTLASLLEIGYQVRFGILEAGAYGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSSPMLK IKLSENVQYAAARSTASGAPFRAITVRDTIGDLPTVKNGASEINMEYQSDPVSWYQKKVRGDMAVLTDHISKEMNELNLI RCQRIPKRPGADWRDLPDEKITLSTGQVADLIPWCLPNTAERHNHWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQ DRILTVRECARSQGFPDSYQFCGNIIQKHRQIGNAVPPPLAFALGRKLKVAVDSKSKSSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 377 | 377 | 2.2E-252 | – | |
| PANTHER | 1 | 377 | 377 | 2.2E-252 | – | |
| ProSiteProfiles | 1 | 375 | 375 | 43.856 | ||
| Gene3D | 3 | 185 | 183 | 5.8E-50 | – | |
| Pfam | 26 | 369 | 344 | 2.3E-44 | ||
| SUPERFAMILY | 35 | 369 | 335 | 5.48E-70 | ||
| TIGRFAM | 35 | 367 | 333 | 5.2E-35 | ||
| ProSitePatterns | 38 | 50 | 13 | - | ||
| PRINTS | 79 | 93 | 15 | 5.0E-7 | ||
| PRINTS | 125 | 138 | 14 | 5.0E-7 | ||
| Gene3D | 191 | 269 | 79 | 2.8E-28 | – | |
| Gene3D | 270 | 334 | 65 | 2.3E-32 | – | |
| ProSitePatterns | 350 | 368 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi5g1v0197200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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