Domain Predictions — View

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PS51679

Source: ProSiteProfiles

Description

C-5 cytosine-specific DNA methylase (Dnmt) domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0008168 View details of GO:0008168 AmiGO InterPro QuickGO	Molecular function	Methyltransferase activity	Catalysis of the transfer of a methyl group to an acceptor molecule.	Subterm of GO:0016741

Associated Lotus transcripts 21

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0024609.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi\|502154028\|ref\|XP_004509555.1\|	Domains G3DSA:2.40.50.40 G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR000953 IPR001025 IPR001525 IPR016197 IPR018117 IPR023780 IPR029063 NON_CYTOPLASMIC_DOMAIN PF00145 PF00385 PF01426 PR00105 PS00094 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00298 SM00439 SSF53335 SSF54160 SignalP-TM_GRAM_POSITIVE TIGR00675 cd00024 mobidb-lite	33
Lj0g3v0198479.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi\|502164095\|ref\|XP_004513047.1\|	Domains G3DSA:2.40.50.40 G3DSA:3.40.50.150 IPR001025 IPR001525 IPR016197 IPR018117 IPR029063 PF00145 PR00105 PS00094 PS51038 PS51679 PTHR10629 PTHR10629:SF28 SSF53335 SSF54160 cd00024 mobidb-lite	18
Lj0g3v0308569.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi\|502164095\|ref\|XP_004513047.1\|	Domains G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR001525 IPR029063 PF00145 PR00105 PS51679 PTHR10629 PTHR10629:SF28 SSF53335	10
Lj0g3v0324919.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi\|356495335\|ref\|XP_003516534.1\|	Domains G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR001525 IPR029063 NON_CYTOPLASMIC_DOMAIN PF00145 PR00105 PS51679 PTHR10629 PTHR10629:SF30 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53335	15
Lj1g3v1290440.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi\|502164095\|ref\|XP_004513047.1\|	Domains G3DSA:2.40.50.40 G3DSA:3.40.50.150 IPR000953 IPR001025 IPR001525 IPR016197 IPR018117 IPR023779 IPR023780 IPR029063 PF00145 PF00385 PR00105 PS00094 PS00598 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF28 SM00298 SSF53335 SSF54160 cd00024 mobidb-lite	25
Lj2g3v0854150.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi\|502164095\|ref\|XP_004513047.1\|	Domains G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR001525 IPR029063 PF00145 PR00105 PS51679 PTHR10629 PTHR10629:SF28 SSF53335	10
Lj2g3v1646590.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi\|356540854\|ref\|XP_003538899.1\|	Domains G3DSA:2.40.50.40 G3DSA:3.40.50.150 IPR000953 IPR001025 IPR001525 IPR016197 IPR023779 IPR023780 IPR029063 PF00145 PF00385 PF01426 PR00105 PS00598 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF30 SM00298 SM00439 SSF53335 SSF54160 cd00024 cd04716 mobidb-lite	26
Lj2g3v1646590.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi\|356495335\|ref\|XP_003516534.1\|	Domains G3DSA:2.40.50.40 G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR000953 IPR001025 IPR001525 IPR016197 IPR023779 IPR023780 IPR029063 PF00145 PF00385 PF01426 PR00105 PS00598 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF30 SM00298 SM00439 SSF53335 SSF54160 TIGR00675 cd00024 cd04716 mobidb-lite	28
Lj3g3v1010970.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA (cytosine-5)-methyltransferase [Medicago truncatula] gi\|357498929\|ref\|XP_003619753.1\|	Domains Coil G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR001025 IPR001525 IPR018117 IPR022702 IPR029063 IPR031303 PF00145 PF01426 PF12047 PR00105 PS00094 PS00095 PS51038 PS51679 PTHR10629 PTHR10629:SF36 SM00439 SSF53335 TIGR00675 cd04708 cd04712 mobidb-lite	25
Lj6g3v2204760.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA (cytosine-5-)-methyltransferase [Medicago truncatula] gi\|357445897\|ref\|XP_003593226.1\|	Domains G3DSA:3.40.50.150 G3DSA:3.90.120.10 IPR001525 IPR029063 PF00145 PR00105 PS51679 PTHR10629 SSF53335	9
LotjaGi2g1v0168300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp\|P34881\|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr\|I1JXB2\|I1JXB2_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0168300	Domains Coil G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR001025 IPR001525 IPR017198 IPR018117 IPR022702 IPR029063 IPR031303 IPR043151 PF00145 PF01426 PF12047 PIRSF037404 PR00105 PS00094 PS00095 PS51038 PS51679 PTHR10629 PTHR10629:SF48 SM00439 SSF53335 TIGR00675 cd04708 cd04712 mobidb-lite	29
LotjaGi2g1v0168300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp\|P34881\|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr\|I1KCC0\|I1KCC0_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0168300	Domains Coil G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR001025 IPR001525 IPR017198 IPR018117 IPR022702 IPR029063 IPR031303 IPR043151 PF00145 PF01426 PF12047 PIRSF037404 PR00105 PS00094 PS00095 PS51038 PS51679 PTHR10629 PTHR10629:SF48 SM00439 SSF53335 TIGR00675 cd04708 cd04712 mobidb-lite	29
LotjaGi2g1v0224800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp\|Q94F88\|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr\|K7K149\|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0224800	Domains G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR000953 IPR001025 IPR001525 IPR016197 IPR018117 IPR023779 IPR023780 IPR029063 IPR043151 NON_CYTOPLASMIC_DOMAIN PF00145 PF00385 PF01426 PR00105 PS00094 PS00598 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF42 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00298 SM00439 SSF53335 SSF54160 SignalP-TM TIGR00675 cd18635 mobidb-lite	36
LotjaGi2g1v0356800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT1G80740.1 chromomethylase 1; Swiss-Prot: sp\|C0SQ89\|CMT3_ORYSJ DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr\|I1J8E3\|I1J8E3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356800	Domains G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR000953 IPR001025 IPR001525 IPR016197 IPR023779 IPR023780 IPR029063 IPR043151 PF00145 PF00385 PF01426 PR00105 PS00598 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF42 SM00298 SM00439 SSF53335 SSF54160 TIGR00675 cd04716 cd18635 mobidb-lite	29
LotjaGi3g1v0150100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp\|P34881\|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr\|I1JXB2\|I1JXB2_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi3g1v0150100	Domains Coil G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR001025 IPR001525 IPR017198 IPR018117 IPR022702 IPR029063 IPR031303 IPR043151 PF00145 PF01426 PF12047 PIRSF037404 PR00105 PS00094 PS00095 PS51038 PS51679 PTHR10629 PTHR10629:SF48 SM00439 SSF53335 TIGR00675 cd04708 cd04712 mobidb-lite	29
LotjaGi3g1v0150100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp\|P34881\|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1; TrEMBL-Plants: tr\|I1KCC0\|I1KCC0_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi3g1v0150100	Domains Coil G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR001025 IPR001525 IPR017198 IPR018117 IPR022702 IPR029063 IPR031303 IPR043151 PF00145 PF01426 PF12047 PIRSF037404 PR00105 PS00094 PS00095 PS51038 PS51679 PTHR10629 PTHR10629:SF48 SM00439 SSF53335 TIGR00675 cd04708 cd04712 mobidb-lite	29
LotjaGi4g1v0146500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp\|Q94F87\|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2; TrEMBL-Plants: tr\|A0A0B2PQY3\|A0A0B2PQY3_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0146500	Domains G3DSA:2.30.30.490 IPR000953 IPR001025 IPR001525 IPR016197 IPR018117 IPR023780 IPR029063 IPR043151 NON_CYTOPLASMIC_DOMAIN PF00145 PF00385 PF01426 PR00105 PS00094 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00298 SM00439 SSF53335 SSF54160 SignalP-TM TIGR00675 cd18635 mobidb-lite	32
LotjaGi4g1v0146500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp\|Q94F87\|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2; TrEMBL-Plants: tr\|A0A0B2PQY3\|A0A0B2PQY3_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0146500	Domains G3DSA:2.30.30.490 IPR000953 IPR001025 IPR001525 IPR016197 IPR018117 IPR023780 IPR029063 IPR043151 NON_CYTOPLASMIC_DOMAIN PF00145 PF00385 PF01426 PR00105 PS00094 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00298 SM00439 SSF53335 SSF54160 SignalP-TM TIGR00675 cd18635 mobidb-lite	32
LotjaGi4g1v0407700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp\|Q94F88\|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr\|K7K149\|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi4g1v0407700	Domains G3DSA:2.30.30.490 G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR000953 IPR001025 IPR001525 IPR016197 IPR018117 IPR023779 IPR023780 IPR029063 IPR043151 NON_CYTOPLASMIC_DOMAIN PF00145 PF00385 PR00105 PS00094 PS00598 PS50013 PS51038 PS51679 PTHR10629 PTHR10629:SF42 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00298 SM00439 SSF53335 SSF54160 SignalP-TM TIGR00675 cd18635 mobidb-lite	35
LotjaGi5g1v0197200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT5G49160.1 methyltransferase 1; Swiss-Prot: sp\|Q7Y1I7\|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A; TrEMBL-Plants: tr\|A0A0B2RC49\|A0A0B2RC49_GLYSO Cytosine-specific methyltransferase; Found in the gene: LotjaGi5g1v0197200	Domains G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR001525 IPR018117 IPR029063 IPR031303 PF00145 PR00105 PS00094 PS00095 PS51679 PTHR10629 PTHR10629:SF48 SSF53335 TIGR00675	15
LotjaGi5g1v0272500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp\|Q94F88\|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr\|A0A151T2T3\|A0A151T2T3_CAJCA Cytosine-specific methyltransferase; Found in the gene: LotjaGi5g1v0272500	Domains G3DSA:3.40.50.150 G3DSA:3.90.120.20 IPR001525 IPR029063 PF00145 PR00105 PS51679 PTHR10629 PTHR10629:SF42 SSF53335	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF53335	SUPERFAMILY	1	4.76