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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0198900 |
| Transcript ID | LotjaGi5g1v0198900.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:49633040..49640008) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGTGCATTGTGTCCTCTCAAAAGGATTCTGGGGGAAATAGAAGGAAGCCAGGGAGTATTGGAGAAGTTTCTGTAAA TGTTCCCGGTCTAAGAATTCCTAAACCTGTTGATTTTGCTCACTCACTTGGTGACTGCTTGTCCAAGAGTTTAGTGGAAC GCCTATCAGCACTTAGAACTCGTATAGTTGTAATGGCCGGCCAAGAAGGTCCTACAATTACAAGAACAAAAAGAAAAAGT GCCACCCAGCATGGTAAGTGTTAGCAAGGATGAATCATTTTTTAATAAGTAACTTGCGCTAATTTAATGATGCATCACCC AATTTCATCCTCAGGTGGTTCAACACTGGCTGATCTTCTGCAAGCTCTTGAAGACTACTTGCCAGTACTTTTGGGATTAG TCAAAGATGGTAAAGCATGCTTTTTTCTATTCATACTTGATGTATGTTCCCTCCTCAACATGTCCTGATTAATTCCTTGT CTTTGTTTTGCAGGAAGCCATTTGCAATTCAAAGTACAATTTGTTTGGGTGAATCAGGAGGATGATGCAGAGGTAGTTCC CATTTTGGTAATGAATACAGATGTTTTATGTTTTAATATTTATTTCTGTACACAAGAATACTGACCATTTTTTCTCTCCT CTCCACTTTTCCGCCCTTTTTGGTGCTATTGACACTTTTTTGCAGGAAACAGCTATGTCTAATGCTTGGTACGAAGTGTT GTCAGTTTTGCACTTGATGGCAATGCTATTGTTATCACAGGCTAATTTATTACTTCTTCCAAGAACATCCTCTGATGGTT ATCAGCCAAAAGTAACAGAAGGTGAGTAATACTGAGTTTTTTGGTAGTTGTCAAAATATTCCTTGTTGCTTGCCCCAAAA TTTTATTGCTTATTATACCCAACAACCAAAATACATTTTATCGTAGGATAGTACTTTGGGCCTCCAATTGACTCCCCCCC CCCCCCCCCAACTGATTGAGGTTTTGAAGATTAACTAAAGCTAAACGTAGAATATCCTTGAGGTTTTCTATTAATCTTGT TCTTCTGTGTTTATGATTATTTTACTACATGGAACATTTACTGATTATTTAAATTACCATTATATTTGATTCACTGTCAA AAAATATGACAAAATGTGTTTTAATTACCAGTAATTTTTAATTTGCCTCATTTATTCGTGAACTTTGAAGAAAGATAACC GTACTTCCCTTTTTGTTGCTCTTTGTCTTCTCATGTTTGGTGGATCCTTCCATTAAGTAGACCTAACACACGTGCATTGC GTGTGCTGTACATAATTCTCTTCATATCTGCATTTTAGATTGGAAATTTTATCTTGCCTTAAACAGAAGAATACAAAGTG TACTGTTTTTTCTTTTCAAGTCTTGGTTATATAATGCGGTAGCTGATTAACTGGAAAACATATTCTGCTGTCTTATATAA TACTTCTATTTCTGACAGTGTTGCTTCATTGATTCCCCTATTATGTTTTCCTACTTTGAAGTTTGAACTTTTGGTGATTA CTAATTACTAACAGAAAACAGACGAGCTTCTGTTGATATCTTCTTAAAGTCAGCTGGGTATCTGGACTGTGCTGTCAAGC ATGTTCTCCCACAGTTGCCTGAAGAGCTCAGGTATATGAATATAAACAATGAATTGACTATCACACTGCTGTGTAGTCTA AACAATGTTCTCTTTTTTTATTTCTCTTCTCACTGTTGGTTATGGGTTTTAGGAGAAATTTACCAGTGGACCTTGCAGAA GGAGTTCTTCGAGCACTCTGTCTACAAGCATTGGGACAGGTATTAATGTTTTCTATTTCATGGAGTTACCAGATGAATTT CCTCGCATCTTGTAGTTCATTCTGCATGCTTAAATAGGAAGATACACAGCAGAGAATTAAAACTGAAAACCTATCATATT TAATGGCTAACCTAAAACCAATGGGTCATGTAACTTTATTCAAGGTGGAAGCTTCTTGTTTACTATTCTTGTCACGAATT TATGTTGAACATTAAGTTAACGACTACTAGAAATCACTTTGCTGGGGGTTTATTTATGTATCTAATCTAATAATTGACAC CGGACTTAGGCCTAACTTAACCTGAAAAGCCAGTTTAATGGATGGAGATTGCCCAAGTCACTGCTAGTGGTACTAAGCCC ATATACCCAAACAGTGAGATCTTTGTACACCAACCTCACACCTAGGACTGGAATCTAGGCCATGAAGTTTGCAAGATTGG ACATATGCGAGTGGGCTAACATTAGGGTCGGGACAACCCCTGATATCATATCATAATACAACTTCTTCAAAACTTAAGTT GTTAGGTGAATGCACGTAACTGGCTTTACACCTTTTATATCTATGACATGGTCATTCAAAAGCTTTCTATGCTTAAAACA TGGGAAATGCATAAGGTCCTGAAATTTAAGTTTTATTTAAAAGAAAAAGATGGCGGCAAGGATTAAACTGTTGATACATT GTCATGGCCATGGAGGCTTTGGTACTTATAAACCAACAGGCCATCCCCACTTTAAAATTGATTTCTTCATGTTTAAATCT GTCAGATTGGTTTTTATGCATTCCCCCTCATATGAAAGCCCACTATGCATCACATACTGTTAGAAACTACTCTATAGTCT AATACTAAGCTTTCAACGACGTTTCTAGGGTAGTTTAGTCGTCAAATGTTGACTGTGGACATAGGACCAGTTTTAAAGTG GACATCGCCTGCTGCTTAATAAAGTTTAGGTCTAAAGCTAAAGCCCAATTGTCAGACTAGTTTTGTCTTACTTTTTTTTT GTTCTTTTATGAAGATAAAACTGATATTAGAAGAAAGAGGGATAATGAGCCCAGATTTTCACATGCATAGTGCCAGATAC ATTCTAAAATGACCTGAGAGCCATTCAAATAGAAACTCTTATAGTCGAATTCTTTTAGTTCCACTGGTATGTAAAATGTT CATTTTATTCGAGGGTGAAAATTAAAGCTATAAAGGGATTAAAAGGGGACATTGTCCGATAGCTGCAGTTATCTTGATTT AAGTTTAAAGTCCTATATTTTGTCTTAATAAACATATTAACCATGGTTTTTTAGTCTAAAGGTGTATCTTTTCTATTAGA GAATGTTTGTGATTCAATACCATCAGACTTGTGCATATGTGACTATCCCATTTGTGGTGGCCGAATCCCATGTCAATTGG TACCAATGTTACATAGAAAACTGGAGAAGGGGAACAAAATGATAGAAACCTTCATTCACTCTCTCTCATATCTATTTTTG GGTAAAATTGTTATTCATATCAATATTTTAATAGGGTGTAGATATCCAACTTGGAATGGCAATTGATAGTGCCAAAGCCA CACTTGCTGTGAAGCGTAGACTTGCATGTGAGATGGTGAAATATTGGCAACAGGTACAAATGTAAAATTTATTATCGTTA TAATACCAGACATTGATAGGCATATGTAATGAGATTTTGGGAACTGTCATATTTTACTGCTGGTGCATTCTTCTGAATGC TTTTAGAACTCTGAAGTCTGAACCTCAAACTTTAATTTTTGGTATAAATTTTCAAATTTAATTTAATATCTGTAGGATTA AAGAGAAGCTTGTTTGAATTATATAAGTATTAATAATTTAAAATGTAGGCTGAAATGCACTTTTGGACCCCCAAGTTTAC ATTTTTTGCGATTGTTGACCCTGGTCTTATTTTTCTACGAAACGAGACCCTCTCCAGGCAATTTGTATGCAGAAGATGGC TGGTCTTTTTGCCTGGAGAGGGTCTCGGTTCGTAGAAAAATAAGATCAGGGTCAACAATCGCAAAAAAATGTAAACTTGG GGGTCCAAAAGTGCATTTAAGCCTAAAATGTAGTGAGGATCATTGTGTCCTGTTGTGAAATCTTTTTCTGGATTTGTATT GCGTAAGTTTTTTCAGTATGACCTCTGTTCTGTGGATGAATTTGTTGGTTTCCACTAGTCTTGGTTATTTCTCAATTGAT GCCTTGTTTTATCCCAGATCTCTGATGGGATCTCTAACTTGTTCCGTTGGTTTTATATTTACAACATTTATTTCCGCAGG AAAATCCTTGTTTCAATTCTGTATATGCTGTATGTGCATTAGTAAGTTAACCTTACTTTGTTTATACCGTTTACTTTTCA GGCTCAAGATAATATAATGAACCTTCCTTTAGCTAATGGTTGGGGGAAGAAACATATACTTTATGTTAAATGGAAACATG TTGAAGCAAAGGTTTGTGTTTTTTCTGCCTTCTGGTTATTTGCATCTTGCTATTTAATACTCCCTCCGTTCCTAATTATA AGACCTAATACAAAAAATAGCGCTTATTAAGAAAGTATTAAATGTGTCTAATTAGTGTATTGGTTTTTTAAAAATGCATA CATTCTTCCATATTTACCCTTTGTCATTTTCTCTCACTAATTAATGATAGGTGGTAATTAAAACTTTGAAATTGAAAACA CACAATTAATGTGAGGGGTATATATGGAAGAGTATAATACTTTTTGCTAGATTATTGTAAAAGGTCTTATATTTAGGAAC ATGAAAAATCTAAAACTAGGTCTTATAATTAGGAACGGAGGGAGTATGTGTTATTGTATAGTAGTATGAGTTGAATGGAT TTTCCTTGTTTACTGATTGCATTATGCCAATAAATGTTGGAGTATAAATTGATTGATATAATGCATTGTCCAAGATAAAA TATGGAGCTGGTAACTTGAGAAATTGTGAGATTAAATTTCTATGTTTATTATGAGACCATGTTTAGTTGGAAGTGTCTTT AGGGAGATTTAGTTAATTGATCATGACTCATCTGCTTTTGTATAGTGACTGAAAACTAAAATACTTGGTCCAGCTGATGC TGATGTTTTCATTGAAGAGTTGAAGAGGATGATTAAATATTTTCTAAATTCTAATGATTAATGATCCACAATTACCTTCC CTGGGCCATATTTTACAATTGCTAGCTTTTCTCACATTCTAGGTACAGACCCGAACCTGGTAAATGAATTAGGGACCCTA GAATTATCATGTGTTATGCTGTTCAATTATATCATTAGTTTTCTTCTTTTCTCTTCTGTCATTGACTTGGTAGTGGGTTT CAACTTGGTTAATGAAGTGCTCAGCTGTTCCCATTTCTAGACTCTGACAATAATATGCTGAAATCATTTGATTTATTCTT ATTTTATATGCCCTTAATCCTAGTTGATGAGACCTAAGTCTAACTACCACCATAAGCCTATATAGTTTCTTTTGCTTTCA TCATATTGATGTAAAGTTCAGGAATTGAGTATAGAAGATGCATTCAACTGAAGCAACTGATGTAGATTAATTAATATGTT TATTGTATTGATTTACCAGTCTGCGGCATATTACTATCATGGTATGATTCTTGATGAGGGAAATACAGAGAAATCTCAAG GGATGGCTGTAGCTGCTCTGGAAGCAGCTGACGATTATTTCAAAGAAAGTAAGAAGCTGTGTGAGGCATTCAATGTGGCA CCCCCATTATCAAGGTAATCCATTATATTCCCCGGTGCTCACTAATGTGATAGCATCCTTAGTTATATTTAGCCTGTCTC GAACTGGCACTGAGTGCATGTTAGATGTGTGCCAATTTGCTGTTAACTATGCTGTCTTTTCTGTTTACTGCATAAATGTA CTAGGAAGAAGCATGGATGTCAAGATAATAAAAGGAATAGTAAATAGTTAGAAGAATTGGAATGCACATGATGCCTGTGT GAATGAAGATGGGTTAATGAACTTAGTCTCATGCCTCATCCTTTTGAGAGAACAGCAAGTCTTCTCATGACAATTTTGAC ATCTCAATTTCTTATGCCTTTAGAAAATGAAAGGTATTATATTATACTAAAATTGCTTAGCAGGTGATATACCTGTTTCA AGCTCTGAGCAACTAATTGATTAATGCTAAACTTGGGTCGTTGGTGAACTTTAGTTTGTGACTGATGTCTAAATCTATGT GCATAGCTCAACTAAATATTTGCTTTTACTTTAGTAATGTTTTTGACTTAGATAGTTCAGTATGTTTTGGTTTCGGATAG CTTGATTCTTGAGTTTCTACCTGTATCTTGCACTGTGAAATATTGGTAGTTGTTTCTCCTCTGAAAGGAATGTAAAATAA TAATGAAGAATAAAGTTTGGAAACTGCAGTTTAATCTCAAGTTACTTTGCATATATACAACAAGCTTACGATATTTTGGC ATGAACTTTTGTTATGTTTCTTTAGTTTAATATATTTAGGGAAAATAATTAGGGTTCTCAAGGAAATTGTCCATACCCTT TTCCTCTCCCTTAAATGTAATGCAACACCTTAGGAATTGCTGAAATCATATAACCTTGTAAAGTTGAATAGTTTTCTTCA CCGGTTTCTTGTCCAAAGAAAAGATCAACATTAAGTGAGACATGTAATATACATATGCTCAACTCTTTGTCATGAACATG CCCTATTTTTTCAAGTTCATTTTTCATGCACCATTCTAGTTCCATATTTTTTGTGGTGATATGCTTTATTATGGTCATCT AACTGGCTTATTCATGGTACAGAAATCCACCACTTTGGGGTACAATGAAATATCTCTCTGAGAAAATTCCTAAGGATACC TCGAGCAAGGTTCGAGTAAACCGTGATCTTTACTCTCATGAGAGGTAAACTTTACAGAGTGCAAGATTTAGTGGTTGCCT GAACAACTGTAATTTCAACATTGATAATTATTCTTTCTCAATGAGAAGAAGTAAAGAAGTACAAGGAGTAACTAATTTAT GCATGTTCTTGCTAATGTTTTTTACAGAATCATGGAGACAGCACCAACATTGCCTGATTTTGCCTTGGCTTTGAAACCAG ATGAGTATCAACTTCCTCCAGTGAGTCCCTCTTGGACCGAAAACGTGAAAGGGGGGCTAACTGGCGCCGCCAACCATCTC AAAGGATGA
CDS sequence (LotjaGi5g1v0198900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTGCATTGTGTCCTCTCAAAAGGATTCTGGGGGAAATAGAAGGAAGCCAGGGAGTATTGGAGAAGTTTCTGTAAA TGTTCCCGGTCTAAGAATTCCTAAACCTGTTGATTTTGCTCACTCACTTGGTGGTTCAACACTGGCTGATCTTCTGCAAG CTCTTGAAGACTACTTGCCAGTACTTTTGGGATTAGTCAAAGATGGAAGCCATTTGCAATTCAAAGTACAATTTGTTTGG GTGAATCAGGAGGATGATGCAGAGGAAACAGCTATGTCTAATGCTTGGTACGAAGTGTTGTCAGTTTTGCACTTGATGGC AATGCTATTGTTATCACAGGCTAATTTATTACTTCTTCCAAGAACATCCTCTGATGGTTATCAGCCAAAAGTAACAGAAG AAAACAGACGAGCTTCTGTTGATATCTTCTTAAAGTCAGCTGGGTATCTGGACTGTGCTGTCAAGCATGTTCTCCCACAG TTGCCTGAAGAGCTCAGGAGAAATTTACCAGTGGACCTTGCAGAAGGAGTTCTTCGAGCACTCTGTCTACAAGCATTGGG ACAGGGTGTAGATATCCAACTTGGAATGGCAATTGATAGTGCCAAAGCCACACTTGCTGTGAAGCGTAGACTTGCATGTG AGATGGTGAAATATTGGCAACAGGCTCAAGATAATATAATGAACCTTCCTTTAGCTAATGGTTGGGGGAAGAAACATATA CTTTATGTTAAATGGAAACATGTTGAAGCAAAGTCTGCGGCATATTACTATCATGGTATGATTCTTGATGAGGGAAATAC AGAGAAATCTCAAGGGATGGCTGTAGCTGCTCTGGAAGCAGCTGACGATTATTTCAAAGAAAGTAAGAAGCTGTGTGAGG CATTCAATGTGGCACCCCCATTATCAAGAAATCCACCACTTTGGGGTACAATGAAATATCTCTCTGAGAAAATTCCTAAG GATACCTCGAGCAAGGTTCGAGTAAACCGTGATCTTTACTCTCATGAGAGAATCATGGAGACAGCACCAACATTGCCTGA TTTTGCCTTGGCTTTGAAACCAGATGAGTATCAACTTCCTCCAGTGAGTCCCTCTTGGACCGAAAACGTGAAAGGGGGGC TAACTGGCGCCGCCAACCATCTCAAAGGATGA
Protein sequence (LotjaGi5g1v0198900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCIVSSQKDSGGNRRKPGSIGEVSVNVPGLRIPKPVDFAHSLGGSTLADLLQALEDYLPVLLGLVKDGSHLQFKVQFVW VNQEDDAEETAMSNAWYEVLSVLHLMAMLLLSQANLLLLPRTSSDGYQPKVTEENRRASVDIFLKSAGYLDCAVKHVLPQ LPEELRRNLPVDLAEGVLRALCLQALGQGVDIQLGMAIDSAKATLAVKRRLACEMVKYWQQAQDNIMNLPLANGWGKKHI LYVKWKHVEAKSAAYYYHGMILDEGNTEKSQGMAVAALEAADDYFKESKKLCEAFNVAPPLSRNPPLWGTMKYLSEKIPK DTSSKVRVNRDLYSHERIMETAPTLPDFALALKPDEYQLPPVSPSWTENVKGGLTGAANHLKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 44 | 44 | 3.8E-227 | – | |
| ProSiteProfiles | 1 | 383 | 383 | 11.972 | ||
| PANTHER | 1 | 44 | 44 | 3.8E-227 | ||
| SMART | 25 | 362 | 338 | 2.8E-32 | ||
| Gene3D | 41 | 374 | 334 | 6.7E-43 | ||
| PANTHER | 44 | 380 | 337 | 3.8E-227 | – | |
| CDD | 44 | 359 | 316 | 4.65122E-87 | – | |
| PANTHER | 44 | 380 | 337 | 3.8E-227 | ||
| Pfam | 71 | 318 | 248 | 7.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0198900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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