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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0198900 |
| Transcript ID | LotjaGi5g1v0198900.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endosomal targeting BRO1-like domain protein; TAIR: AT1G73390.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q4V8K5|BROX_RAT BRO1 domain-containing protein BROX; TrEMBL-Plants: tr|A0A0L9TYL6|A0A0L9TYL6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0198900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:49633040..49640098) extracted from Lotus japonicus Gifu genome v1.2.
ATAGAAACTCGGTTGTATGCACAGAAACACAAAATTCTTGGAGTTGATTAACTGTATTTTCTTTGTATCAGCAGGTGTAG TATTCAGGACATGGGGTGCATTGTGTCCTCTCAAAAGGATTCTGGGGGAAATAGAAGGAAGCCAGGGAGTATTGGAGAAG TTTCTGTAAATGTTCCCGGTCTAAGAATTCCTAAACCTGTTGATTTTGCTCACTCACTTGGTGACTGCTTGTCCAAGAGT TTAGTGGAACGCCTATCAGCACTTAGAACTCGTATAGTTGTAATGGCCGGCCAAGAAGGTCCTACAATTACAAGAACAAA AAGAAAAAGTGCCACCCAGCATGGTAAGTGTTAGCAAGGATGAATCATTTTTTAATAAGTAACTTGCGCTAATTTAATGA TGCATCACCCAATTTCATCCTCAGGTGGTTCAACACTGGCTGATCTTCTGCAAGCTCTTGAAGACTACTTGCCAGTACTT TTGGGATTAGTCAAAGATGGTAAAGCATGCTTTTTTCTATTCATACTTGATGTATGTTCCCTCCTCAACATGTCCTGATT AATTCCTTGTCTTTGTTTTGCAGGAAGCCATTTGCAATTCAAAGTACAATTTGTTTGGGTGAATCAGGAGGATGATGCAG AGGTAGTTCCCATTTTGGTAATGAATACAGATGTTTTATGTTTTAATATTTATTTCTGTACACAAGAATACTGACCATTT TTTCTCTCCTCTCCACTTTTCCGCCCTTTTTGGTGCTATTGACACTTTTTTGCAGGAAACAGCTATGTCTAATGCTTGGT ACGAAGTGTTGTCAGTTTTGCACTTGATGGCAATGCTATTGTTATCACAGGCTAATTTATTACTTCTTCCAAGAACATCC TCTGATGGTTATCAGCCAAAAGTAACAGAAGGTGAGTAATACTGAGTTTTTTGGTAGTTGTCAAAATATTCCTTGTTGCT TGCCCCAAAATTTTATTGCTTATTATACCCAACAACCAAAATACATTTTATCGTAGGATAGTACTTTGGGCCTCCAATTG ACTCCCCCCCCCCCCCCCCAACTGATTGAGGTTTTGAAGATTAACTAAAGCTAAACGTAGAATATCCTTGAGGTTTTCTA TTAATCTTGTTCTTCTGTGTTTATGATTATTTTACTACATGGAACATTTACTGATTATTTAAATTACCATTATATTTGAT TCACTGTCAAAAAATATGACAAAATGTGTTTTAATTACCAGTAATTTTTAATTTGCCTCATTTATTCGTGAACTTTGAAG AAAGATAACCGTACTTCCCTTTTTGTTGCTCTTTGTCTTCTCATGTTTGGTGGATCCTTCCATTAAGTAGACCTAACACA CGTGCATTGCGTGTGCTGTACATAATTCTCTTCATATCTGCATTTTAGATTGGAAATTTTATCTTGCCTTAAACAGAAGA ATACAAAGTGTACTGTTTTTTCTTTTCAAGTCTTGGTTATATAATGCGGTAGCTGATTAACTGGAAAACATATTCTGCTG TCTTATATAATACTTCTATTTCTGACAGTGTTGCTTCATTGATTCCCCTATTATGTTTTCCTACTTTGAAGTTTGAACTT TTGGTGATTACTAATTACTAACAGAAAACAGACGAGCTTCTGTTGATATCTTCTTAAAGTCAGCTGGGTATCTGGACTGT GCTGTCAAGCATGTTCTCCCACAGTTGCCTGAAGAGCTCAGGTATATGAATATAAACAATGAATTGACTATCACACTGCT GTGTAGTCTAAACAATGTTCTCTTTTTTTATTTCTCTTCTCACTGTTGGTTATGGGTTTTAGGAGAAATTTACCAGTGGA CCTTGCAGAAGGAGTTCTTCGAGCACTCTGTCTACAAGCATTGGGACAGGTATTAATGTTTTCTATTTCATGGAGTTACC AGATGAATTTCCTCGCATCTTGTAGTTCATTCTGCATGCTTAAATAGGAAGATACACAGCAGAGAATTAAAACTGAAAAC CTATCATATTTAATGGCTAACCTAAAACCAATGGGTCATGTAACTTTATTCAAGGTGGAAGCTTCTTGTTTACTATTCTT GTCACGAATTTATGTTGAACATTAAGTTAACGACTACTAGAAATCACTTTGCTGGGGGTTTATTTATGTATCTAATCTAA TAATTGACACCGGACTTAGGCCTAACTTAACCTGAAAAGCCAGTTTAATGGATGGAGATTGCCCAAGTCACTGCTAGTGG TACTAAGCCCATATACCCAAACAGTGAGATCTTTGTACACCAACCTCACACCTAGGACTGGAATCTAGGCCATGAAGTTT GCAAGATTGGACATATGCGAGTGGGCTAACATTAGGGTCGGGACAACCCCTGATATCATATCATAATACAACTTCTTCAA AACTTAAGTTGTTAGGTGAATGCACGTAACTGGCTTTACACCTTTTATATCTATGACATGGTCATTCAAAAGCTTTCTAT GCTTAAAACATGGGAAATGCATAAGGTCCTGAAATTTAAGTTTTATTTAAAAGAAAAAGATGGCGGCAAGGATTAAACTG TTGATACATTGTCATGGCCATGGAGGCTTTGGTACTTATAAACCAACAGGCCATCCCCACTTTAAAATTGATTTCTTCAT GTTTAAATCTGTCAGATTGGTTTTTATGCATTCCCCCTCATATGAAAGCCCACTATGCATCACATACTGTTAGAAACTAC TCTATAGTCTAATACTAAGCTTTCAACGACGTTTCTAGGGTAGTTTAGTCGTCAAATGTTGACTGTGGACATAGGACCAG TTTTAAAGTGGACATCGCCTGCTGCTTAATAAAGTTTAGGTCTAAAGCTAAAGCCCAATTGTCAGACTAGTTTTGTCTTA CTTTTTTTTTGTTCTTTTATGAAGATAAAACTGATATTAGAAGAAAGAGGGATAATGAGCCCAGATTTTCACATGCATAG TGCCAGATACATTCTAAAATGACCTGAGAGCCATTCAAATAGAAACTCTTATAGTCGAATTCTTTTAGTTCCACTGGTAT GTAAAATGTTCATTTTATTCGAGGGTGAAAATTAAAGCTATAAAGGGATTAAAAGGGGACATTGTCCGATAGCTGCAGTT ATCTTGATTTAAGTTTAAAGTCCTATATTTTGTCTTAATAAACATATTAACCATGGTTTTTTAGTCTAAAGGTGTATCTT TTCTATTAGAGAATGTTTGTGATTCAATACCATCAGACTTGTGCATATGTGACTATCCCATTTGTGGTGGCCGAATCCCA TGTCAATTGGTACCAATGTTACATAGAAAACTGGAGAAGGGGAACAAAATGATAGAAACCTTCATTCACTCTCTCTCATA TCTATTTTTGGGTAAAATTGTTATTCATATCAATATTTTAATAGGGTGTAGATATCCAACTTGGAATGGCAATTGATAGT GCCAAAGCCACACTTGCTGTGAAGCGTAGACTTGCATGTGAGATGGTGAAATATTGGCAACAGGTACAAATGTAAAATTT ATTATCGTTATAATACCAGACATTGATAGGCATATGTAATGAGATTTTGGGAACTGTCATATTTTACTGCTGGTGCATTC TTCTGAATGCTTTTAGAACTCTGAAGTCTGAACCTCAAACTTTAATTTTTGGTATAAATTTTCAAATTTAATTTAATATC TGTAGGATTAAAGAGAAGCTTGTTTGAATTATATAAGTATTAATAATTTAAAATGTAGGCTGAAATGCACTTTTGGACCC CCAAGTTTACATTTTTTGCGATTGTTGACCCTGGTCTTATTTTTCTACGAAACGAGACCCTCTCCAGGCAATTTGTATGC AGAAGATGGCTGGTCTTTTTGCCTGGAGAGGGTCTCGGTTCGTAGAAAAATAAGATCAGGGTCAACAATCGCAAAAAAAT GTAAACTTGGGGGTCCAAAAGTGCATTTAAGCCTAAAATGTAGTGAGGATCATTGTGTCCTGTTGTGAAATCTTTTTCTG GATTTGTATTGCGTAAGTTTTTTCAGTATGACCTCTGTTCTGTGGATGAATTTGTTGGTTTCCACTAGTCTTGGTTATTT CTCAATTGATGCCTTGTTTTATCCCAGATCTCTGATGGGATCTCTAACTTGTTCCGTTGGTTTTATATTTACAACATTTA TTTCCGCAGGAAAATCCTTGTTTCAATTCTGTATATGCTGTATGTGCATTAGTAAGTTAACCTTACTTTGTTTATACCGT TTACTTTTCAGGCTCAAGATAATATAATGAACCTTCCTTTAGCTAATGGTTGGGGGAAGAAACATATACTTTATGTTAAA TGGAAACATGTTGAAGCAAAGGTTTGTGTTTTTTCTGCCTTCTGGTTATTTGCATCTTGCTATTTAATACTCCCTCCGTT CCTAATTATAAGACCTAATACAAAAAATAGCGCTTATTAAGAAAGTATTAAATGTGTCTAATTAGTGTATTGGTTTTTTA AAAATGCATACATTCTTCCATATTTACCCTTTGTCATTTTCTCTCACTAATTAATGATAGGTGGTAATTAAAACTTTGAA ATTGAAAACACACAATTAATGTGAGGGGTATATATGGAAGAGTATAATACTTTTTGCTAGATTATTGTAAAAGGTCTTAT ATTTAGGAACATGAAAAATCTAAAACTAGGTCTTATAATTAGGAACGGAGGGAGTATGTGTTATTGTATAGTAGTATGAG TTGAATGGATTTTCCTTGTTTACTGATTGCATTATGCCAATAAATGTTGGAGTATAAATTGATTGATATAATGCATTGTC CAAGATAAAATATGGAGCTGGTAACTTGAGAAATTGTGAGATTAAATTTCTATGTTTATTATGAGACCATGTTTAGTTGG AAGTGTCTTTAGGGAGATTTAGTTAATTGATCATGACTCATCTGCTTTTGTATAGTGACTGAAAACTAAAATACTTGGTC CAGCTGATGCTGATGTTTTCATTGAAGAGTTGAAGAGGATGATTAAATATTTTCTAAATTCTAATGATTAATGATCCACA ATTACCTTCCCTGGGCCATATTTTACAATTGCTAGCTTTTCTCACATTCTAGGTACAGACCCGAACCTGGTAAATGAATT AGGGACCCTAGAATTATCATGTGTTATGCTGTTCAATTATATCATTAGTTTTCTTCTTTTCTCTTCTGTCATTGACTTGG TAGTGGGTTTCAACTTGGTTAATGAAGTGCTCAGCTGTTCCCATTTCTAGACTCTGACAATAATATGCTGAAATCATTTG ATTTATTCTTATTTTATATGCCCTTAATCCTAGTTGATGAGACCTAAGTCTAACTACCACCATAAGCCTATATAGTTTCT TTTGCTTTCATCATATTGATGTAAAGTTCAGGAATTGAGTATAGAAGATGCATTCAACTGAAGCAACTGATGTAGATTAA TTAATATGTTTATTGTATTGATTTACCAGTCTGCGGCATATTACTATCATGGTATGATTCTTGATGAGGGAAATACAGAG AAATCTCAAGGGATGGCTGTAGCTGCTCTGGAAGCAGCTGACGATTATTTCAAAGAAAGTAAGAAGCTGTGTGAGGCATT CAATGTGGCACCCCCATTATCAAGGTAATCCATTATATTCCCCGGTGCTCACTAATGTGATAGCATCCTTAGTTATATTT AGCCTGTCTCGAACTGGCACTGAGTGCATGTTAGATGTGTGCCAATTTGCTGTTAACTATGCTGTCTTTTCTGTTTACTG CATAAATGTACTAGGAAGAAGCATGGATGTCAAGATAATAAAAGGAATAGTAAATAGTTAGAAGAATTGGAATGCACATG ATGCCTGTGTGAATGAAGATGGGTTAATGAACTTAGTCTCATGCCTCATCCTTTTGAGAGAACAGCAAGTCTTCTCATGA CAATTTTGACATCTCAATTTCTTATGCCTTTAGAAAATGAAAGGTATTATATTATACTAAAATTGCTTAGCAGGTGATAT ACCTGTTTCAAGCTCTGAGCAACTAATTGATTAATGCTAAACTTGGGTCGTTGGTGAACTTTAGTTTGTGACTGATGTCT AAATCTATGTGCATAGCTCAACTAAATATTTGCTTTTACTTTAGTAATGTTTTTGACTTAGATAGTTCAGTATGTTTTGG TTTCGGATAGCTTGATTCTTGAGTTTCTACCTGTATCTTGCACTGTGAAATATTGGTAGTTGTTTCTCCTCTGAAAGGAA TGTAAAATAATAATGAAGAATAAAGTTTGGAAACTGCAGTTTAATCTCAAGTTACTTTGCATATATACAACAAGCTTACG ATATTTTGGCATGAACTTTTGTTATGTTTCTTTAGTTTAATATATTTAGGGAAAATAATTAGGGTTCTCAAGGAAATTGT CCATACCCTTTTCCTCTCCCTTAAATGTAATGCAACACCTTAGGAATTGCTGAAATCATATAACCTTGTAAAGTTGAATA GTTTTCTTCACCGGTTTCTTGTCCAAAGAAAAGATCAACATTAAGTGAGACATGTAATATACATATGCTCAACTCTTTGT CATGAACATGCCCTATTTTTTCAAGTTCATTTTTCATGCACCATTCTAGTTCCATATTTTTTGTGGTGATATGCTTTATT ATGGTCATCTAACTGGCTTATTCATGGTACAGAAATCCACCACTTTGGGGTACAATGAAATATCTCTCTGAGAAAATTCC TAAGGATACCTCGAGCAAGGTTCGAGTAAACCGTGATCTTTACTCTCATGAGAGGTAAACTTTACAGAGTGCAAGATTTA GTGGTTGCCTGAACAACTGTAATTTCAACATTGATAATTATTCTTTCTCAATGAGAAGAAGTAAAGAAGTACAAGGAGTA ACTAATTTATGCATGTTCTTGCTAATGTTTTTTACAGAATCATGGAGACAGCACCAACATTGCCTGATTTTGCCTTGGCT TTGAAACCAGATGAGTATCAACTTCCTCCAGTGAGTCCCTCTTGGACCGAAAACGTGAAAGGGGGGCTAACTGGCGCCGC CAACCATCTCAAAGGATGA
CDS sequence (LotjaGi5g1v0198900.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTGCATTGTGTCCTCTCAAAAGGATTCTGGGGGAAATAGAAGGAAGCCAGGGAGTATTGGAGAAGTTTCTGTAAA TGTTCCCGGTCTAAGAATTCCTAAACCTGTTGATTTTGCTCACTCACTTGGTGACTGCTTGTCCAAGAGTTTAGTGGAAC GCCTATCAGCACTTAGAACTCGTATAGTTGTAATGGCCGGCCAAGAAGGTCCTACAATTACAAGAACAAAAAGAAAAAGT GCCACCCAGCATGGTGGTTCAACACTGGCTGATCTTCTGCAAGCTCTTGAAGACTACTTGCCAGTACTTTTGGGATTAGT CAAAGATGGAAGCCATTTGCAATTCAAAGTACAATTTGTTTGGGTGAATCAGGAGGATGATGCAGAGGAAACAGCTATGT CTAATGCTTGGTACGAAGTGTTGTCAGTTTTGCACTTGATGGCAATGCTATTGTTATCACAGGCTAATTTATTACTTCTT CCAAGAACATCCTCTGATGGTTATCAGCCAAAAGTAACAGAAGAAAACAGACGAGCTTCTGTTGATATCTTCTTAAAGTC AGCTGGGTATCTGGACTGTGCTGTCAAGCATGTTCTCCCACAGTTGCCTGAAGAGCTCAGGAGAAATTTACCAGTGGACC TTGCAGAAGGAGTTCTTCGAGCACTCTGTCTACAAGCATTGGGACAGGGTGTAGATATCCAACTTGGAATGGCAATTGAT AGTGCCAAAGCCACACTTGCTGTGAAGCGTAGACTTGCATGTGAGATGGTGAAATATTGGCAACAGGCTCAAGATAATAT AATGAACCTTCCTTTAGCTAATGGTTGGGGGAAGAAACATATACTTTATGTTAAATGGAAACATGTTGAAGCAAAGTCTG CGGCATATTACTATCATGGTATGATTCTTGATGAGGGAAATACAGAGAAATCTCAAGGGATGGCTGTAGCTGCTCTGGAA GCAGCTGACGATTATTTCAAAGAAAGTAAGAAGCTGTGTGAGGCATTCAATGTGGCACCCCCATTATCAAGAAATCCACC ACTTTGGGGTACAATGAAATATCTCTCTGAGAAAATTCCTAAGGATACCTCGAGCAAGGTTCGAGTAAACCGTGATCTTT ACTCTCATGAGAGAATCATGGAGACAGCACCAACATTGCCTGATTTTGCCTTGGCTTTGAAACCAGATGAGTATCAACTT CCTCCAGTGAGTCCCTCTTGGACCGAAAACGTGAAAGGGGGGCTAACTGGCGCCGCCAACCATCTCAAAGGATGA
Protein sequence (LotjaGi5g1v0198900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCIVSSQKDSGGNRRKPGSIGEVSVNVPGLRIPKPVDFAHSLGDCLSKSLVERLSALRTRIVVMAGQEGPTITRTKRKS ATQHGGSTLADLLQALEDYLPVLLGLVKDGSHLQFKVQFVWVNQEDDAEETAMSNAWYEVLSVLHLMAMLLLSQANLLLL PRTSSDGYQPKVTEENRRASVDIFLKSAGYLDCAVKHVLPQLPEELRRNLPVDLAEGVLRALCLQALGQGVDIQLGMAID SAKATLAVKRRLACEMVKYWQQAQDNIMNLPLANGWGKKHILYVKWKHVEAKSAAYYYHGMILDEGNTEKSQGMAVAALE AADDYFKESKKLCEAFNVAPPLSRNPPLWGTMKYLSEKIPKDTSSKVRVNRDLYSHERIMETAPTLPDFALALKPDEYQL PPVSPSWTENVKGGLTGAANHLKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 421 | 421 | 1.9E-257 | – | |
| PANTHER | 1 | 421 | 421 | 1.9E-257 | ||
| CDD | 23 | 400 | 378 | 1.82283E-92 | – | |
| SMART | 25 | 403 | 379 | 5.0E-42 | ||
| ProSiteProfiles | 29 | 424 | 396 | 13.073 | ||
| Gene3D | 72 | 415 | 344 | 4.6E-43 | ||
| Pfam | 90 | 359 | 270 | 3.0E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0198900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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