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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0211200 |
| Transcript ID | LotjaGi5g1v0211200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi5g1v0211200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51563302..51570380) extracted from Lotus japonicus Gifu genome v1.2.
GTCAATGCTGTACTGTTGTTTAGTGGAACACCATCAATGTTGTTGCGTTTGTGTTTTGATAAAAAAATAAAAAGTGGAGA GTAGACTTTCCATGAACTTGCCGAGTTTGACTTCATCTTGACTTGACACCAAATCAGCGTTTAAAGCATGGATCTTGGGG GAAGGATTATCATAAATGTGTATTCTGTTTGAGTGAATCCTATAACGAGTAGAGGAACTCCATCACTTGTTCCTGCAATA TCTTCTTCGACTTCAAGTGAGTTCAAATTCCATCCATTAACTTTTCTTTCGTATCCTTTTGAACACTACTACTGACTACT GATTCTGTGATTGTCTTCCTGCAAATCTGTACAAGTTTCACAACAACCCCTTTGCCCATACTTTATGGGCACAATAACAT ATATATTTTTCTTTGCTATGATATATATAATATATCCAGATCCTATATATATATGACAGCATGCATGCCTAATTAAGTAC TATTATATATCTTTTCTGGAGTTAATTTGTTCAATTTTTCTTTTTTGCTCTTGATTCATTTTCTTTTGATTTGTTGCATA AAAATAAGACGTGTCTGGATTAAGGGTTGAATGATTATTTTTCAGGTTACTTTTGTTTAAATGGAAAATGACATCTCTTC TATTTTGGAGCTACTCATTTCATTACTATGTGAAGGAATACATGAGATTTTTCCCAGAAAAGTCATCAAAAAAGTGGTTA TTGGGAAGGAGGAGTTGATTTCAAATCGAGATCTTGTAAAGCTAAAAATGGTTGAAGCTACAAACAGAACAGAAAAGGTC AATGATGATGTTCTAGAGTGGCTAAATGATGCAGAGAAGTTCATAGAAGAGGTGGAGGAGCTTGAAATAGAAATGGAGAC TCACGATCGGGCCGATGCTTGTTTTGCACAACCACGTGTGCTTGGTGGTGAGAAGAAATATTGGTTGTACAAAGGAATGC TAAAGAAAATAAAGAGGTTGAATGCCAAATGTGAATTTGAGCCATTTTCCACCCCAATTTCAGGTCTAGAGTACTTCTCT TCTGAATATTTTGTGTCTTTCAACTCTACTAAAGAGGCTTCAGATCAACTTATGAAAGCTCTAAAAGATGATAGTAACCA TATCATTGGATTGTATGGGAAGCGGGGCTCTGGCAAAACAAAATTGGTAGAAGTAGTGGGTAAGAAAGCCAAATGTTTAA TGGTTTTTAATGAAGTTATATTTGCCACTGTGTCCCAAAATGCAAATAATGTCCGAAGGATTCAAGACCAAATTGCTGAC TCCTTGGATCTGACATTTGAAAGATATTCTGAAGCAGCTAGAGCAAGGACAATATCTTCAAAAATTGAAAGTAAGGGTCG AGTTCTTGTTATCTTAGATGATGTTCGGGAAAAACTTGAGCTTAAGGATTTAGGTATTCCTATTAATGGTAATAGATGCA AGGTCCTTTTGACCACACGTAGCCAACAAGAATGTACCTTAATGGATTGTCAGAGAGAAATTCCTCTGTGTCCCTTGTCT GAAGAGGAAGCTTGGGCTTTGCTAAAAAAACATTCAGACATTGATGATGAGTCCTCGTCCGACCTATTAACCGTGGCACG AGAACTTGCTAATGAATGTCAAGGGTTACTTGGTACAATTAAAGATGTGGGATCTTCCTTACAATGTCAACCCATTGAGG AGTGGAAAGCATTAATAGATAGCTTGAGACATTCGGCTCGCTACCAAATCTTTCTCAGCTTTAGGGGAGATGATACTCGC TACTCTTTTACTGGTTCTCTCTATGATGCTCTGTGCCGAGAGGGATTCAAGACCTTCATGGATGATGGGGGATTGGAGGG TGGCGACCAGATTTCACAAACTCTTATCACTGCAATTGAAGCATCAAGGCTTTCTATTATTGTTCTATCTGAAAATTATG CAAAATCCGCATGGTGTCTTGATGAACTTGTCAAGATCGTGGAGTGTATGAAGACAAAGAATCAATTAGTTTGGCCAATC TTTTACAAGGTGGAACCATCAGATGTAAGATATCAGAAAAATAGTTACGGAGAAGCCATGGTTGCACATGAAAATAGATT TGTGAATGATTCTGAGAAGATTCAAAGATGGAGGTTAGCTTTGTTTGAAGTTGCTGGCTTATCTGGAATGGCTTATTGTA ATGGGTATGTGCTATACTTTTAAATGTTTTTAGTTATGTTCCATATTTGACGTCTAGTCTACTAGCACTAGTGGTTAATA CTATGCTAATTAGTTACTTAGTTTTTAGTTTTTGAAGTTCTTTGATATGTTTACAAAGAAATGTAGGCTTCTAAGTGTCA TTTTAAAGGTGACTTTGTTAACAGGAATGATTTTAGCTTCAATGCAGTTTTGTATGATGCATGACAATCCGTTTTGTGTG TGATTAATTAGTCAAGCTTATTGTTTTCATATTCTTTTAATGATATAAATTATGTATAATGAAAATTTTGTGCAGAGACG TGATTTAAAGTGCCTTGTATCTTTCATTGCAGGTATGAATATAAGTTTATTCAAACAATTGTGGAAAGGGCCAAGAATAA TAAGAATCGCTTGTATCTACAAAGCACATATATGGAGTAGAAGGTAGACTAAGTGTCGCACAAGATAATTTATCACAAGT GTTTGCTAGCTCAAAATCGGATGGTGGTTCTATTGTGTGTTAAGTATGAGGAAGTAGTTTTGGACACTTTTCATATTCAG AAATGGTTTAAAAAATTTCGAGTGGTTTATTTGTGAGAATTGTGTCTGTTCTAAAATATCCAGGAGCTGTTAATCTTGAC TTGCTCTTTTATATGATAAATCCAGTTTAGAGGATTCACTTGTATTTTGGATTCTTATCTGAACAGGCAGTGAAATCCAT GGTTATGTTTATATGGTAAATCTTATATATTATGACTTGAGGGGATTTTCCCCAATTTCAATATGATTAGTCTTTTCCCC TTTTTAGTTTATCATTCCATAGTTATCTACTATGTGATGCTCTTCAATATGGGTACAGGTAAAAGATATGCAGTAGTGTT ACAAAACTGCATTTATCAAAGTGGCTGCCATTTCTAATGAACAGAGGGTAAGTGTTTCTCCACTCCTAGGGGCTAATCAC TATACTATCTGAAATCTAATCCAAACCACTGGTATAAACTGTACCAAGAGATCTGAACCAGTAAAAAATTCCAATGCCAA CGAACTAGTGCCCTTTGCCTTTTGCTTGTATGCAGAAGTCACATGAATAATTTTACATTATTATTTTTATCAGATAGAAG AGGTAAACAACCCCTTTGCCCTTTGCCTTCAGGGCATAGCACCAGATTTTTCTTTGCTATGATCCTAGTAGCAGTTTGCC TAAGTTTTATATATATTTTCTCTAAACTGTTGCAGTTTTTATCTTGCACTTTAGTTCATTCATTTTGTTTTGATTTGCAT AAAAATGCAGCCCAGATTGAAGGGTTTAAGTTTATTATTTTCCAGGTCAATTTTGTTTGAATGGAAAATTTAGTAGTTAT TGCTGGTGCTATTTATACGTGAAGGAGCTTATCCATTTCGTGTTTGGAAAATCATTAGAAGCGTGGACATTGAAAAGGAG AAGCTGATTTCAAATCTAGGCATTGTGCTGAAAATGGTTGAAGATACAAACAGAACAGAAAAAGTCAATGATGCTGTTAT GGAGTGGTTAAATGATGCCGAAAAACTCATAGAAGAGGAGATGTTGAAAATAAAAATGGAGGCTGGAAAATCCAATATTT CTTTCACAGGTCTGTTGTTAGTGAGAGTGGGAGGAGATATATGGTGCACTTCTCTTTCACGGGTACTTCTCTTTTGGAAA TTTTGTATGCTTCAAGTCTACTAAAGAGGCTTCAGATCAAAGTTAAATAAACAAACAAGTCTGACATGGACAGTTCAAGA GCAAAATAAAGGTTTAAAAGAGCGGGTGTTTTAAGGGATTTTGAATCATACTATACAATACATATTCTTCAAGCCCACTC TCCCTGAATCAACTGCATAGATTTGGGCCCTACGCACCCTAAATTCAACAAGTGGTATTAGAGTTCACTTTCCCAACAAC CCACTATTCAAGAACAATAAAACCAATAATTCTTTTTTAGAAATTACATCAAAATAAAACAATTTGGACTCAGATAAGAA AATAGAATCAGTCATAGGCCTCCGAAACTCAGTTCGCACAAAAAAGAGTACCCACAACAACTGTCTTTGAGATTCCACTT AGGCACAAGTAGAACAAGTCTAAACTCGATTACTCTGGTTAGACTTGTGGGTGAGGATGAAAGTTAAAGAAACAAACAAG TCTCACATGAGTCAGTTCTTCAAGTCACTCTACTTGGATCAACAACATAGTTCTTTACTGTTACTATTCATCATTTTTCG GCCGAAGGACTAAAATTAAACTCTTTTACAAAATTATTACCTAATTTGACCATTAACCATACTTAATACTCCATTCATTC CTATTTATAAAACCATTTCGAGATATCTTTAGTGTCCCTTTATATAAGACTCATACTAAGTTTAAGGAATATTTATCGGC ATCTTCTTTCATATATCATCCGTGTATTTATTTAGCTATTGTAATTCTAAAGTTTTGATTACTACTTATAATTAATTATT TCACACTACCTAATATATTAATTAAGGGTAAATACATTAGTTGATTTCATTACATATTTTATTAACAAACTCATAATTGT CTTAAGAATGTCTTATAATATAAACAGAGGGGTTAGTAGTAACAAATTTTTATAGGAGTTGATTTTAATGTCACATTTAT TCAATTAGACACCACACTTATAAGTGCGGAATATAAAATATACATTCCGCTTAGTAAAAGACTAAAAGCGCACAAGAGAA TCACATAGAGATGACATAAATATATAGAGGAGACATTAAAATCAAATCCCAATTTTTATTGCAAAAATGTTTCAGATGAA GTAAAAGGAAGATGAAAATAGGTGAACAAACCCTAAAGCATAAGTGAGGGAATCATTGATTTTCCTAAGCTCAAAGCTCA GCCACAGACATCAATGGCATCCCAAAATTAAAGTTTAAGAGTATTACATTGATTTTCCAAAACCAACAATAATAAAGCAT GTTAATTTATACTCTGGACATCCAGAGTATAACCATTGGAAATTTAGTCAGGGGATGCAATTCAGGTCTAGATTTATATT TATCCTACTCTGAATTCAAAGGATGGGGAGACATTGGATGTGTGATAAAGGGAGATAATTTGAAGTATTACTAGTATCCT GATGATTGCTGGCAGATTGGAAATTATGGAGAATTCATTGGGTTTTGGGCATATATTGTATTGGGCTCTACTTGAAGATT TCATTTTGATCTTAGAGAACTTGTACTCTTTTTCCTTACTAGGTTTTCCCAAGGGGGTTTTGTCCTAGTAAGGTTTTAAT GAGGCTTGTTCTCTAAGATTTTTCTTCAAGGAGAGGTGGGGGTATCTTAGTAGTAGATGGATCTTTGTCTACTATACTGT TAGTCATCGATTATTCCTCTTTTCTTTTGTCTCTCTCTTTGTATTGGGTTGAAGTACCCTTGTACTTCATCTTAATATAT TCTTTTTTGCCTTTCAAAAAAAAAAGAGTATTACATTGAAATTTTTATTTTGATACATCGAAAAATTACATTGAGAATTT TTTAACAAAAAGAACCTTTTTTTTTTAATTTGTTAATTTTTTTCCTTTGGAAGAATCCATTTTCAGCTTTCCAAATTGGA TTTTTGTTCAGTGTGTATATGTCTATATGAAAAAGAAGACACAACTCTAACCTAAGACAAGGTCTTGGGCACACTCTCAC TGACCAGGAAGCTGTTGTTGCAAAAGCTGAGGTTTGAGCATGCTTCACAGTGCGCGCACGGTGTTGTCTGGGCACACCAG CACTTCAGCTTTTGCGTTCAAACCTTGTCATCCGTCTACAAACAAAGCCTCTTCTTCACTCGGATTCTACATGGACCAAC CACCTCACCTTTCATCTTCTTTGAAGCTGAAGCAGTGTCGCCACCCTCACCTCACTATTCAAGCATCAAACCAGCAGGGT GCAGTTTCCTCAAGGTTAAGTTTTGCATCTTTATTAATGGGGTTTGTTTAAAACTTGTTTTGACAATAGCCCTTCACACC CTTTTGAGAATTGAGGCATATGGATGTGAAAATTTATAGTTTTGAGGTTTCTGGAAGTGAAAAGTAATGTCTTTTGAGTT CTGACCATGTTGTTGTTATGTGTTGTAGCAATGATGAGGTACCTGTTCATGGACTGTCTGAAGCGGTTGTTGGGGTTCTG GGAGGAGGTCAACTGGGTCGCATGCTTTGTCAAGCTGCTTCTAAGATGGCAATTAAAGTTATGGTTTTGGATCCACAGGA GAACTGCCCAGCGAGTTCGCTTTCTTATCAGCATAGGGTTGGAAGCTTTGATGACAGTGCTACTGTGGAGGAATTCGCAA AGAGGTTATAGTTTTTATGTGAAAATAGATTTGTGAATGATTCTGAGAAGATTCAAAGATGGAGGTCAGCTTTGTTTGAA GTTGCTGGCTTATCTGGAATGACTTATAGTAATGGGTATGTGCTATACTTTTAATGTTTTTAGTTATGTTTCATATTTGA CGTCTAGTCTACTAGCACTAGTGGTTAATACTATGCTAATTAGTTACTTTTAGTTTTTGAAGTTCTTTGTTATGTTTACC AAGAAATGTAGGCTTCTAAGTGTCATTTTAAAGGTGACTTTGTTAACAGGAATGATTTTAGTTTCAATGTAGTTTTGTAT GATGCATGACAATCCGTTTTGTGTGTGATTAATTAGTCAAGCTTATTGTTTTCATATTCTTTTAAATGATATAAATCTGT ATAATGAAAATTTTGTGCATACGTGATTTAAAGTGCCTTGTATCTTGCATTGCAGGTATGAATATAAGTTTATTCAAACA ATTGTGGAAAGGGCCAAGAATAATAAGAATCGCTTGTATCTACGAAGCACATATATGGAGTAGAAGGAAGACTAAGTGTT GCACAAGAGAATTTATCGCAAGTGTTTGCTAGCTCAAAA
CDS sequence (LotjaGi5g1v0211200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATGACATCTCTTCTATTTTGGAGCTACTCATTTCATTACTATGTGAAGGAATACATGAGATTTTTCCCAGAAA AGTCATCAAAAAAGTGGTTATTGGGAAGGAGGAGTTGATTTCAAATCGAGATCTTGTAAAGCTAAAAATGGTTGAAGCTA CAAACAGAACAGAAAAGGTCAATGATGATGTTCTAGAGTGGCTAAATGATGCAGAGAAGTTCATAGAAGAGGTGGAGGAG CTTGAAATAGAAATGGAGACTCACGATCGGGCCGATGCTTGTTTTGCACAACCACGTGTGCTTGGTGGTGAGAAGAAATA TTGGTTGTACAAAGGAATGCTAAAGAAAATAAAGAGGTTGAATGCCAAATGTGAATTTGAGCCATTTTCCACCCCAATTT CAGGTCTAGAGTACTTCTCTTCTGAATATTTTGTGTCTTTCAACTCTACTAAAGAGGCTTCAGATCAACTTATGAAAGCT CTAAAAGATGATAGTAACCATATCATTGGATTGTATGGGAAGCGGGGCTCTGGCAAAACAAAATTGGTAGAAGTAGTGGG TAAGAAAGCCAAATGTTTAATGGTTTTTAATGAAGTTATATTTGCCACTGTGTCCCAAAATGCAAATAATGTCCGAAGGA TTCAAGACCAAATTGCTGACTCCTTGGATCTGACATTTGAAAGATATTCTGAAGCAGCTAGAGCAAGGACAATATCTTCA AAAATTGAAAGTAAGGGTCGAGTTCTTGTTATCTTAGATGATGTTCGGGAAAAACTTGAGCTTAAGGATTTAGGTATTCC TATTAATGGTAATAGATGCAAGGTCCTTTTGACCACACGTAGCCAACAAGAATGTACCTTAATGGATTGTCAGAGAGAAA TTCCTCTGTGTCCCTTGTCTGAAGAGGAAGCTTGGGCTTTGCTAAAAAAACATTCAGACATTGATGATGAGTCCTCGTCC GACCTATTAACCGTGGCACGAGAACTTGCTAATGAATGTCAAGGGTTACTTGGTACAATTAAAGATGTGGGATCTTCCTT ACAATGTCAACCCATTGAGGAGTGGAAAGCATTAATAGATAGCTTGAGACATTCGGCTCGCTACCAAATCTTTCTCAGCT TTAGGGGAGATGATACTCGCTACTCTTTTACTGGTTCTCTCTATGATGCTCTGTGCCGAGAGGGATTCAAGACCTTCATG GATGATGGGGGATTGGAGGGTGGCGACCAGATTTCACAAACTCTTATCACTGCAATTGAAGCATCAAGGCTTTCTATTAT TGTTCTATCTGAAAATTATGCAAAATCCGCATGGTGTCTTGATGAACTTGTCAAGATCGTGGAGTGTATGAAGACAAAGA ATCAATTAGTTTGGCCAATCTTTTACAAGGTGGAACCATCAGATGTAAGATATCAGAAAAATAGTTACGGAGAAGCCATG GTTGCACATGAAAATAGATTTGTGAATGATTCTGAGAAGATTCAAAGATGGAGGTTAGCTTTGTTTGAAGTTGCTGGCTT ATCTGGAATGGCTTATTGTAATGGGTATGAATATAAGTTTATTCAAACAATTGTGGAAAGGGCCAAGAATAATAAGAATC GCTTGTATCTACGAAGCACATATATGGAGTAG
Protein sequence (LotjaGi5g1v0211200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENDISSILELLISLLCEGIHEIFPRKVIKKVVIGKEELISNRDLVKLKMVEATNRTEKVNDDVLEWLNDAEKFIEEVEE LEIEMETHDRADACFAQPRVLGGEKKYWLYKGMLKKIKRLNAKCEFEPFSTPISGLEYFSSEYFVSFNSTKEASDQLMKA LKDDSNHIIGLYGKRGSGKTKLVEVVGKKAKCLMVFNEVIFATVSQNANNVRRIQDQIADSLDLTFERYSEAARARTISS KIESKGRVLVILDDVREKLELKDLGIPINGNRCKVLLTTRSQQECTLMDCQREIPLCPLSEEEAWALLKKHSDIDDESSS DLLTVARELANECQGLLGTIKDVGSSLQCQPIEEWKALIDSLRHSARYQIFLSFRGDDTRYSFTGSLYDALCREGFKTFM DDGGLEGGDQISQTLITAIEASRLSIIVLSENYAKSAWCLDELVKIVECMKTKNQLVWPIFYKVEPSDVRYQKNSYGEAM VAHENRFVNDSEKIQRWRLALFEVAGLSGMAYCNGYEYKFIQTIVERAKNNKNRLYLRSTYME
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 64 | 91 | 28 | - | – | |
| Gene3D | 139 | 294 | 156 | 1.8E-22 | – | |
| SUPERFAMILY | 145 | 366 | 222 | 3.25E-34 | ||
| Pfam | 155 | 366 | 212 | 1.8E-32 | ||
| PRINTS | 168 | 183 | 16 | 2.0E-6 | – | |
| PRINTS | 242 | 256 | 15 | 2.0E-6 | – | |
| PRINTS | 333 | 347 | 15 | 2.0E-6 | – | |
| Gene3D | 361 | 536 | 176 | 1.1E-62 | ||
| SUPERFAMILY | 362 | 509 | 148 | 1.18E-39 | ||
| PANTHER | 364 | 530 | 167 | 4.6E-80 | – | |
| PANTHER | 364 | 530 | 167 | 4.6E-80 | – | |
| ProSiteProfiles | 366 | 507 | 142 | 28.468 | ||
| SMART | 367 | 507 | 141 | 2.5E-39 | ||
| Pfam | 368 | 533 | 166 | 1.9E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi5g1v0211200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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