Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0212200 |
| Transcript ID | LotjaGi5g1v0212200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin protein ligase DRIP2; TAIR: AT2G30580.1 DREB2A-interacting protein 2; Swiss-Prot: sp|Q94AY3|DRIP2_ARATH E3 ubiquitin protein ligase DRIP2; TrEMBL-Plants: tr|K7N522|K7N522_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0212200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51700518..51706022) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAAGTCAAATTGTCAATATCCACACACGAAACCAACAACAAACCTTGGTTTTGTTAGTACTGTGGTTTGTGTGTGTA TTGCTTCTTCTCTTTTCTCTTCATGCTCTCTCTCTTTCTTTGCTTTGGTCCAATTACACAACCAACACCCAACAACAACA CTCAACAGTTTCACCTTCATCTTCACGTGATTTTCATTCCCAAATTCCAAACCCATCTCGCGATTTCACCCCCAAAACCC GCCACTCAATAGATCCACGTCCATTCATTCTTGCTCGTGCTCGTGTTTTGCTATATATTCTGTATCAGTTTCTCTCTGTG TTTGTGTGCGCTGGATTTGAATGCAAGTTCGACATGGTGGCGACAGTGAAAGTGAAGAGCGATAAGCTACGACCATGCAT GACATGCCCTCTTTGCCGTAAACTCTTCAAGGATGCTACCACCATCTCTCTCTGCCTTCATACCTGTTCGTCTCTGCTTT TCACTTTCAATTGCTTTCTCACGTGCCCATGTTCTCTTTCAATTTGATTTTGATTCTGATTAATTGTTTTTGCTTTCTGC ATTCTTTTTTCTCTTAGATTTTGATGTAGTTGTAGCTTATCTTCCTATGCAATGTGTTATTTGTTAACCCTTCTGGGCTC TTGTAATTTTTATGCAATTAGCTGGGTTTTCATGATCTGGGTTTTTTGTTCAATGTAGTTTCGTTGATTCTTTCTCTAAC ACTGTGTGATTGATGATTTGGGTGATCTAGTTTCCTTCCTGGTCTTAATTATTGTGTAATGGTTTTGTGACTTTCTGGGT TTTGCGTGAAGAGAACGTTCAAGTTTAAACAGATGTTTCAATGAAGTGATGAACAATAACACTGCCATGATAGTTATTAC ATCTTTTCCTTTTATGTGCTTCATTGATTGTTTGGGTTTCTACTATTTGATGGGTAAGGAATGGGATGGATCATGCTCAG TGCAGCTTTTTCTTCTGTTAAGTGATTTGGAGTCTAGCTAGCTAGGTGACATTATTTTTATGGTCATCTTCACTTTTAAT GTAGTGTAATTTCATTATATGCTTATTTTACAATTTGAGCAGTGTGTGATATTTATGACATTCCTGAATTGCACACATGC ACCTTGTTTGCATGTGTACAAGGTTCTTCTGTATGAATGATGCATTGAGCAATGAACCCTGTTACAGTTTGCAGGAAATG CATTTATGAGAAGCTCTCAGATGAGGAGTCTGATTGCTGTCCAGTGTGCAATATTGATCTAGGATGTGTTCCAGTGGAAA AACTCAGGTTGGTTATAGTATTTGATTACCAATTTATTATTGCAGTTTGGGTGATTTATGCTTTCTTTGAACTGAATTAA ACAAACATGCGGTTTCAATTTCATGCTGTGAAGAGCTTATTATCTGTTTGTTCATTTATTCTGCTTCTCCTTCCTTCATT TCCCTTAGTATCTCTTGTTTGTTATGTACAAGAGAGCATGCAGTTAAACATTTATAATCAGTGCTTATGATCAAAATCAA CCCATACCTTGCTTTTAGTACAATTCCAACTTTGCCTTAGCAATTTATGGCATTGAATCTCTCTCACAATGTATTGCTGA ATTACCAAACTAAGCTCCTTCCTTTTCCTTTCCCTACTTTCAGAAATGTTCATCAAAAAGTGTCATTTGCCATATCTATC TTCATTTTTGTAACAGAATATTGTTTATCTGTTGAACTGCATATCTATTCAGACACAGAATTTTGTTCAATAAAAATAGT ATCATTGTCATATTTTACAAGACATCTTTCTGCCTAAATCTATAGTCTGAGGATTACCTTATATGTACTTTTCATAAGAT TTCATCTGCAGCTTGTGATTTTTGGGAAAGATTGATGTTTTTATACAATGGATTTTTAGGCATAAAAACCCCAATCAGAG TGGTGTCTTCCTCATTTTTAAGCATGTTAAATTTCAATAAGTTATTATTAAAGATTTGCATGCACATTGTTTTATGAATT TTAAAAACTAGTTTCTTGCAAATCTCAATCATGGGTTCCTATTAATGATATGCAGGGCAGACCACAATTTGCAAGACATA AGAACAAAATTATTTCCTCTCAAGAGAAGAAAGACCAAGGCCCCAGAAGTTTTGTCTCCAATACCCTTGCCTGCAAAAAG GAAAGAAAGATCACTTTCGTCATTGGCGGTTATTGCTCCCAAAGTTTCAATGCAAACTGGCTTCACAGGAAAGCGGACAA AAACCAGTAACAGAAAAGCTGCCTCATTACGTGGATGTAGTTTTATTCTTGAAGACCCCGTAAAGAAGGAAGAAACAAAT AATGAAGATAATAAGGTGAGCTCAATCTTACCTGATTTATCAAATATGAGGAAGTTAAGATTTTGGTTATGACTTAAGAG GTTGGAGTTTTGCTTGTTTATATGTAGCATTAATTAAGACTTGAGTCCATGTGATAACGGTCATGTATAATCAATTCATT ATAATGTTAGGATTCTTCCAAGGCTGGGCAATTTAAGAAGCATAAGCCCAATGAAGACATGGAGAACAGTGTGGAACTTG CAGAAGGGAAGGTTGATCTCTGGACACCATTGAACTGTCTTGTTGAAGCTGCAAACAGAACGAAGTCCTTCAAGGCCAAT TCACAAGCTACGCCTGTTGCCGAATTAGAGTGTCCAACTACTTCTCATGGAGGACTAGATCAACCTGAAACTACAACCAA AACAGGCCTACCTGCTTTTGCTCAGAATGAATTAAACATTCCTAAATGCAAAATTAAGGATACCGGACATAAAAAATTAT TCGGCGTTGACAAGGATGCGAAATGTGTGCCTTCAGGACCAGCAAAGCGAAAAAGGTTGCGTCCTGCTGGTCAGAAAAGA GCTGCAGCATCTGATATGTCTGCCTCAGCCCCAGGCATGCTAAGTGCAACTTGGGGAAAGTGTAACAGAAAAAACAGTCC TATTTGGTTTTCATTAGTTGCTTCAGAGGATCAGTAAGTTAGTTCTTATATATGTAAGTCATATTAATTATGAAATGTTA ATCTTCCAGGGACCTTAAAGGAGTTAATTTTTTTATTCAGGAAAGGAGATGCCTCCTTGCCACAGATCTCATCTTGTTAC TTAAGAATAAGGTAATTCCTCTAACTCTCAGTCCCTCTCTGTTCATCTGATTTATTTTTAATTTTGAAAGTCTTGCTTCA TTATCGCTTGAGTGAGTACAACTTTGGCCTGTGAATTGAACAGAATATAGTTTTTTCTCCTTTTGTCGTGCCAAAAATAG ACTAACTGTGATTAAGATGCAAAATGAAAAAGTGTTTTTGTTAACTAAATTGGTGGTAAATTGCAACCCGAGAGGGTAAA AAATGTTATACGCTTATGCATTTAAAGATAAGATTGATAAATGTTCAGGAAAACACTTCCATGCTGCATTCTAAGAAAGT ATTATGTCACTCAGATCACATTTTGCAAATTAATCTTCTGTTCTTTGTAACTTGATTTGGTCAAATTTTCTTAGAACAGT CATATATGCAGAAAACAACAGATTGATGATCATGGACTAAATCATTAGTTGATTTAATTTTCTGTATTATCCAAGATAGA AAATGCAAAGATTGATGTTAATTGTCTGAGTTACAGTTTTAGCAAAGCAGAACTTTGAAGTGTGTTGATTTTCCTGCCTC TTATGTTCTCTTATTGCTTGCCCTCTTTCTTTCTTCTTTACTAGTTTTCAAATACACTCCCTTTTGATGATAAGGACATA AGTCTTAATTGTGTTTCTGACCTCATCACAGAGATGGTACCGTGCCTGTCTCATTTATACAAAAATACCTTGTGAAGAAA CTCAATCTTGCCAGTGAAACAGAGGTAAGCTCATCATATATCACTCTACCTTCTAAGAATTAAGAATGTTTCTCTCTCTG GCTTTCTATTTTCTTTCTTACTCTTACTAACTTATTTTGGTAGAAGGTTGTAATTATAGAAAGAGTGTGTGTTCCTTAAT TATTTGATGTATAGTGTATGTCTTCTTTATTGTTGTGTGCGAAAGATTGCCCCAGGAGACCAAGAATAGTGCAAACCTTT TGAACATTGTCTGAAGCTATCATAAGAAGTTAGTTCAAATATAAAAGCGTTAATTTAGGACCTGTGAGAATTCTATTAAA CTTGTATTTTTTACTCAATAGAAAACAGCAAGTGATGCAAATTCATAGTTAATGAGAACACCAACAGTGCCTTCAACCTC TACCATATGCGCGCCCACATGATTTGCGATGTAAAGAATTTTTTTTTTTTTGAACTGCTGCGATGTAAAGAAAATAAAAA TGAAGGAAACAAAATTATTATCTTGAAGTTGTAACTCCAAGTCAACCCTGTAGGCAATAGGCACTAGAAACTGAACTAGC ATTTGAAAACATGATTGAAGTCTTTACACCTTGGATCCAGGTTTTACTAGGTGGGTTTTGCCATATATTAGTGTGTTAGG ATACCAGTTGAGTGGAATGTAAGCAGGCTTTCATCTCAATCAATTAAAAGAGTTTGGTTCACTTTTTGTTTTGAAGTGTG TTAAGGTTTGTTTGCACCGGTGGCAACGGATATCCGAACATTGTCTTAGTCTGAAATATTGTTTTCTAGATACAATCCTT GTTTGCTGAAAGTCTCAGATACTATTGGCAGTCCAATGTGCTATGTAAACTTCAATTGCCTTATATGATTTCCAGGGTTG TGATCTGAACTTTTTGTTTTGGCAAACATTATGATTACAATAAATTTTCTTTCCAAATGAAATACACCAAAAAAAGAACT TGCCTGCCTGCTGCATTATTGGATTTAAAGATTGGTACCGTTTTGTAATTTGAACAGGTGGAAATAATGTGCCAGGGTCA GCCAGTGCTCCCTTCTCTGCAACTGCATAACGTGGTAGATCTCTGGTTCCGGACAGCTTCAACCTCAAAGAGAATGCCAG CATCTGTGGGGTCCTCAGCCAAGGATTTTGTAATGGTTTTATCTTATTGTCGAAAGGCCTAGTTCCTTGTTCTGTTTATA CATTTTGCCTCAACTCTTTACATAGGGATTCAACTTTTTTTTCTTCTTCTAATAGCATTCTTATATTCCTGCTTGAGGAT TTGTATATTTAATTTTTACCATGTGAAGAATCTATGTGCTTTTGTTTTGCTCATGACCTGAAAACGTGTACCGAGACCAA ATTTGTTGCATGTACTTTATCTGCTGTTATTCTTAGTATCATGAAACATTTTGTATTTTTTCTGTTGAACTAATGAGAGT GGTATTAAATCATAACAAATGAATGAAAGAGAAGCTATGCAAAACAGCGAGAGATTAATTTTTTGGGACACTGTTAAACT TGCTAATTGCATTTTTTTATAACTTCAATTTGAACTTTCCATTCTAGGTAGATATCTGGACACCACTTCCCTTAGTTACA TCACACTTCACATTGTCATGTTCGAAATTAGGCTTGATTGTGCTTTTAACCTCTCTAGTTTGGAA
CDS sequence (LotjaGi5g1v0212200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCGACAGTGAAAGTGAAGAGCGATAAGCTACGACCATGCATGACATGCCCTCTTTGCCGTAAACTCTTCAAGGA TGCTACCACCATCTCTCTCTGCCTTCATACCTTTTGCAGGAAATGCATTTATGAGAAGCTCTCAGATGAGGAGTCTGATT GCTGTCCAGTGTGCAATATTGATCTAGGATGTGTTCCAGTGGAAAAACTCAGGGCAGACCACAATTTGCAAGACATAAGA ACAAAATTATTTCCTCTCAAGAGAAGAAAGACCAAGGCCCCAGAAGTTTTGTCTCCAATACCCTTGCCTGCAAAAAGGAA AGAAAGATCACTTTCGTCATTGGCGGTTATTGCTCCCAAAGTTTCAATGCAAACTGGCTTCACAGGAAAGCGGACAAAAA CCAGTAACAGAAAAGCTGCCTCATTACGTGGATGTAGTTTTATTCTTGAAGACCCCGTAAAGAAGGAAGAAACAAATAAT GAAGATAATAAGGATTCTTCCAAGGCTGGGCAATTTAAGAAGCATAAGCCCAATGAAGACATGGAGAACAGTGTGGAACT TGCAGAAGGGAAGGTTGATCTCTGGACACCATTGAACTGTCTTGTTGAAGCTGCAAACAGAACGAAGTCCTTCAAGGCCA ATTCACAAGCTACGCCTGTTGCCGAATTAGAGTGTCCAACTACTTCTCATGGAGGACTAGATCAACCTGAAACTACAACC AAAACAGGCCTACCTGCTTTTGCTCAGAATGAATTAAACATTCCTAAATGCAAAATTAAGGATACCGGACATAAAAAATT ATTCGGCGTTGACAAGGATGCGAAATGTGTGCCTTCAGGACCAGCAAAGCGAAAAAGGTTGCGTCCTGCTGGTCAGAAAA GAGCTGCAGCATCTGATATGTCTGCCTCAGCCCCAGGCATGCTAAGTGCAACTTGGGGAAAGTGTAACAGAAAAAACAGT CCTATTTGGTTTTCATTAGTTGCTTCAGAGGATCAGAAAGGAGATGCCTCCTTGCCACAGATCTCATCTTGTTACTTAAG AATAAGAGATGGTACCGTGCCTGTCTCATTTATACAAAAATACCTTGTGAAGAAACTCAATCTTGCCAGTGAAACAGAGG TGGAAATAATGTGCCAGGGTCAGCCAGTGCTCCCTTCTCTGCAACTGCATAACGTGGTAGATCTCTGGTTCCGGACAGCT TCAACCTCAAAGAGAATGCCAGCATCTGTGGGGTCCTCAGCCAAGGATTTTGTAATGGTTTTATCTTATTGTCGAAAGGC CTAG
Protein sequence (LotjaGi5g1v0212200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVATVKVKSDKLRPCMTCPLCRKLFKDATTISLCLHTFCRKCIYEKLSDEESDCCPVCNIDLGCVPVEKLRADHNLQDIR TKLFPLKRRKTKAPEVLSPIPLPAKRKERSLSSLAVIAPKVSMQTGFTGKRTKTSNRKAASLRGCSFILEDPVKKEETNN EDNKDSSKAGQFKKHKPNEDMENSVELAEGKVDLWTPLNCLVEAANRTKSFKANSQATPVAELECPTTSHGGLDQPETTT KTGLPAFAQNELNIPKCKIKDTGHKKLFGVDKDAKCVPSGPAKRKRLRPAGQKRAAASDMSASAPGMLSATWGKCNRKNS PIWFSLVASEDQKGDASLPQISSCYLRIRDGTVPVSFIQKYLVKKLNLASETEVEIMCQGQPVLPSLQLHNVVDLWFRTA STSKRMPASVGSSAKDFVMVLSYCRKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 107 | 106 | 4.2E-16 | ||
| PANTHER | 4 | 427 | 424 | 4.7E-213 | – | |
| PANTHER | 4 | 427 | 424 | 4.7E-213 | – | |
| SUPERFAMILY | 12 | 74 | 63 | 8.72E-11 | – | |
| Pfam | 18 | 58 | 41 | 5.3E-8 | – | |
| SMART | 18 | 58 | 41 | 1.1E-4 | ||
| ProSiteProfiles | 18 | 59 | 42 | 11.589 | ||
| ProSitePatterns | 34 | 43 | 10 | - | ||
| MobiDBLite | 153 | 183 | 31 | - | – | |
| MobiDBLite | 278 | 300 | 23 | - | – | |
| CDD | 321 | 423 | 103 | 1.97929E-52 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0212200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…