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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0217900 |
| Transcript ID | LotjaGi5g1v0217900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine-containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3S0F2|I3S0F2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0217900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:52390096..52392201) extracted from Lotus japonicus Gifu genome v1.2.
GGCATTGGAAGAAATGTATACCTAACATTCTTGACTCTTGAGTAAGTGGTTAAAGCTTGAGATTAGTAATGGATGGTGGT ATAATTCAGCTGCAGAGGCACCTTGTTGATTACACTGCCTCCCTATTCGATGAGGTAGCCATTTTCTACAATTTCCATTC TACATTCATTGCATACACTGAAGTAGAAAGAAAATTAAGGCTAGTTCAATGGATAGTTTTGGTGATGTATTTGTTCTGTT TGAGAAGGGCTTTCTAGATGAACAGTTTAACCAGCTTGAGCTACTTCAAGATGAAAGCAACCCAGATTTTGTGGTTGAAG TGGTCACTCTCTTTTTTCAAGATGCAGAGAGGCTTCTTGATGAGCTCACAAAGGCTCTGTAAGGACACTCACAACAATCC ACAATTCCTGTTTTTTTTTTTATCTCTTTGAAAATCTGTTTCCAAGCTTCATATTTCAATTCATTGGTGACTTATCTCAA CTCAAACAGAGGACAGGCAAGCATTGATTTCAAAAAGTTGGATGCTCATGTTCACCAACTGAAGGGTAGCAGCTCCAGGT AGTTTACATTCATTTCCTGTATGGTGTTCTTACAATTATTATGATTTTGACAAAGTGGTTTGGGTTACTTGGAAATTATG CAGTGTTGGAGCACAGAGAGTTCACAAAGCCTGCATTTCCTTTAGAAATTCATGTGAGGAGAAGAACATTGAAGGGTAAG CTTCTTCACAATTCCATATCGAAATTATTATATTCCGATGGATCATGGATATTGTTCGGCTGAGAAATGCCTAAAACTCC GGGCGTTCTTTAGATTGAGTAAAGAGCAAACCACAACAGTGAACTTGAACACCAAATCTTTCACATATATATTGGTCAAC ACTTCATTTTTCATCAAAAATGAGACTTCTTACTCACACTGGTATCCCAACACATATGATATGAATGTTATCAAAATATG TTGTTAACAAGTTATGTGTTTATGGTTTGATATAAATCAATCTCCATATGCTGATAAAAGGGTTGGTTTTCAGGTGTCTT AAAAGCTTGCAACAAGTAAGACATGAGTATTCCTTGGTGAAAAGTAAACTTGAGACTCTCTTCAAGGTAAAGGGGATATG TGGATATATCTTATCTAGTACTTTCTGTTAAATCTTGTGGAGCTGTTCATTTTTCCTTTGGAATCTCTTTTCTGATTGTA GATGGAGCAACAGCTTTCGGCTGCAAGTGGATCTTTTTCTAGGTAGTGTGATGCAAAGAGCACTAAGAAGAAATCATGTC ACAGTGTGCAAACAGAACAACCATGTTTATGTTGTATTTTTCATGTTGTTTGTGATTTTGTTGAGTCTACCATGGTCTCC AAATTAGATTTGTCATTTAAGCTTGAGTTGATCCATATTTAGTCCAAAAACATTGTGAATATCCCATGGTCCTATGGTTT ACAGAAATTAGAAGCTGGACCTCTCAATTGTGGAATGCTAACTTGGCAATTTTATGGTAAAACATGCTAAAAACTGATTC ACTCATGAATCATATTTTTACTTGTTAAAAAGGTAACATTCAGTATATGTTAAAAAATCATCCTTTTTTGTCAAATTTGA TTTGCAAGGAGAACCATAATATGTTAAGAAATCACCCTTCTATGTCTTTGATTTGCAAGGAGAACCATATTTTCTTGGAA ACAGTAGACAAAGTCATTCTAACTATCTATGAAGGCTGTGTTTGTTTTTCTGTTGACTCTATCTGCAATGTACATTGGTA CAAATTCGGACATAAAAGCCTACAAATGTGAATGGTTGGATTAGACAAACGCTCGTTTACACGCTCATTTTTTTCAACTA ATCAACTTGAGGGCCTTGCTAACTGTCTTTATCTATAATAGAGTGTGGTTGTCGTTTAATACTTGATGCAGAAACTACAG TACCTTGGAAGAGATGTTTGTCAATATCTTAAAGCAACAGTGTTATTAGTACTGAAACTCACTATTTTCTTTAGCACTAT ATGACTTGTCTTGGTCCCAAACACATCAATGAGTTATTGTGAACGCAAAATTGTAAATTGTTTTGGATTTATGTTCCCCT GACACTGCTACTAGAACAGAATCCAC
CDS sequence (LotjaGi5g1v0217900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGGTGGTATAATTCAGCTGCAGAGGCACCTTGTTGATTACACTGCCTCCCTATTCGATGAGGGCTTTCTAGATGA ACAGTTTAACCAGCTTGAGCTACTTCAAGATGAAAGCAACCCAGATTTTGTGGTTGAAGTGGTCACTCTCTTTTTTCAAG ATGCAGAGAGGCTTCTTGATGAGCTCACAAAGGCTCTAGGACAGGCAAGCATTGATTTCAAAAAGTTGGATGCTCATGTT CACCAACTGAAGGGTAGCAGCTCCAGTGTTGGAGCACAGAGAGTTCACAAAGCCTGCATTTCCTTTAGAAATTCATGTGA GGAGAAGAACATTGAAGGGTGTCTTAAAAGCTTGCAACAAGTAAGACATGAGTATTCCTTGGTGAAAAGTAAACTTGAGA CTCTCTTCAAGATGGAGCAACAGCTTTCGGCTGCAAGTGGATCTTTTTCTAGGTAG
Protein sequence (LotjaGi5g1v0217900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGGIIQLQRHLVDYTASLFDEGFLDEQFNQLELLQDESNPDFVVEVVTLFFQDAERLLDELTKALGQASIDFKKLDAHV HQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGCLKSLQQVRHEYSLVKSKLETLFKMEQQLSAASGSFSR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 150 | 147 | 5.1E-78 | – | |
| PANTHER | 4 | 150 | 147 | 5.1E-78 | – | |
| Gene3D | 4 | 151 | 148 | 2.5E-55 | ||
| SUPERFAMILY | 6 | 141 | 136 | 7.46E-39 | ||
| ProSiteProfiles | 40 | 145 | 106 | 16.4 | ||
| Pfam | 46 | 128 | 83 | 1.5E-12 | ||
| CDD | 46 | 122 | 77 | 1.18324E-10 | ||
| Coils | 52 | 72 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi5g1v0217900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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