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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0226800 |
| Transcript ID | LotjaGi5g1v0226800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat; TAIR: AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q1C3L9|NLPI_YERPA Lipoprotein NlpI; TrEMBL-Plants: tr|I3SUQ3|I3SUQ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0226800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53395163..53403510) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAAACTTGTTATGCGCCAATTTCTGTTATCAGTTTTCAGTTATCTCTACCTTACCACCATGTTCACTATCCACAA CCTTAAACCCCCAATTTTGGTGTCTCCTTCCCCTTGTTTGCACCACCCTTCATCATTCCCATTGCAATTACCTTCCAAAG CACCCATCTTCTGCTCCAATCCTTCAATCCTCACCCGAAGACTTTTCCTTCCTTCCGTCTCCGCCATCTGGGACGCCGTC ACCGGCGGCAACAACAACAACAATGGCCGTGAAGCCCTTCTTGCAATTCGTCGTGGAATGTCCCTCTTCAGACAGGGTGA TGTTTCCGGGTCTGTTGTGGAGTTCGACAAGGCTATTCAGCTGGACCCTCGTCAAAAGGCTTGTAGGTTTATACATTCTT TGGAATATTCATTGATTTTTGAGTCCCATTACATGAATTTGGTCATGGATGATGATGTGATTCTTACCAGATCTTTGGCA AAGGGGACTCTCACTTTACTACCTTAATAGGTACCCACACCACACTTCACCTCCTAATTTTATTCAATTTCATTCTTCTT TATGGTTAAGAGAAAAAACACTAGTATACTTACTCTCTATTGGGTCTAAATTAACTCTCTGTCAAGTAACCAATTATTAA GCTTTTGGGTAAGGGTAACATGAATGATTTTATAATTTTATTTCTAACACACCCCATCCCGTTTGGGCTTGAAGCGTGAA GAATGTGCAGACTCACCTACCATGTGCTTTAGTTCATTTTCTATTAGAAGAATTTAATGTGGCAAGAATCAAACTCTAGA GTCTAGATTGCTTGGTCATAGACGCTCTGATACCATGTCAAGTAACCAATTATCTCAAAAGCTTAAGCTTTTGGGTACAT GTATTATTATTTGTAACACTTTGAGATAAGGTTGCACGTTTGGAATTCTCGTTAGACTGAGAAATCACGTTAGTACATAA GCTACAATGTGGAGCTTCTTTGGTAACGTGCTTGGAGTGTATTCAACACACATCCAAGCATGCTTAAAAATTAAAATCAT TGTTGAAGTTTTAGTAGCAAAACCATGTGCAAATGGGTGTTAGCAAGCACAGTCACAGTATGCTATCAAAAGGAGACGGA GTTGGATTTGGATCCATTTATTTGAATAAACTATCTCCAAAGCTTAAGTTGTGTAGTGAATTGATAGAAATCTGAATGAA GAGGTGGGCTTAGTGGTAAATGCTTCAGTGGGCCAAGAAGAGAACAGGCCCAAGGTTTGGCAAGTCTATAGGAGGAAACG GGGCAAGGCTGCTGAGGTGGCATTGGCTCAACAGAATTAGGTGTTAGTATAAAGTAACCAAGGGAAAGGGAATAAGATTA TGCTGGATTGATAATTCTGTTATAGAGAGAGAGTAGCATCTCCCTCGGAGAGAACGCTCTAGAGCTTCTCTGGGTTGTTA GAGTTTTTCTAACAGCACACCTTATCACAATATCTTATGTAATTGTCCACTTCAATCAATACAATTGCATTTCTATTCCT TCATTTCATCTTCATTACTTGTTAGCTTCCTAATATCCATCAAATTGGTCCGACCTACCGGATCAACACCGTGGAAGGAG TCTCAACAAGCTGGTAGATGCCACCGAAAATGACCGATCGAATGGAAGCTCTGGAAAACCAGATGGGAAGCGTTACGACG GCGCTGCAAGAGCTCGCTCTCCAACTGCAGCAGCAGAGCTTGACTCTCACTGAACTGAGCAAGCAAATGGGTCGGAAGGA AACGGATCACGAAGGAGATACCCCGATAGCGGATTCACACCCCGGTGAGTCTCGCTTGGCCGGAAAGAAGGTGAAGTTGC CGGTGTTCGAAGGAGAGGATCCTGTGGCTTGGATCACGAGAGCGGAGATCTACTTCGACGTGCAGAATACGCCGGATGAG ATGCGGGTGAAGTTAACGCGATTAAGTATGGAAGGATCGACGATCCATTGGTTCAATCTGTTGATGGAGACTGAGGATAA TCTATCCTGGGAGAAGCTGAAACGTGCGTTGATTGCACGCTACGGAGGAAGAAGATTGGAGAACCCTTTCGAAGAGCTAT CGACATTACGACAGAAAGGAAGTGTAGACGAATTCGTCGAATCCTTTGAGTTGTTGTCATCGCAGGTAGGGAGGCTACCG GAGGACCAATACCTAGGATACTTCATGAGTGGGCTGAAGCCTGCGATCAGACGCCGAGTGCGCACACTTAATCCAGGAAC TCGAATGGAGATGATGCGAATCGCGAAAGACGTGGAAGAGGAACTAAAGGAAGAAGACGAAGACGATGGCAAGAAAATGG TAAAGAGGAGCGGGTTCGATCGCTCGGGTCAAAGCAATTGGGCCGGGTCATCCGCCAATCGGGTTGGGCTTTTTAGTAGG GATGTGACCCGGTTCTCTAAACCAGGCGGGTCAATTCCAAGTCGCTCCATGAGTTCAGTAGGATCGACGACGAATTCAGC CGCGTCTCTGGGTTCCTCAACTCGAAAAGGAGAAAATGATCTCCGTACAGGATCATCGGAGAAGTGGAAAGGGGTCCGCA GCTTCCAGGTGGATGAAATCGCTGAGCGGAGAGCCAAGGGCTTGTGCTTCAAGTGTGGGGGAAAGTATCATCCTACCCTG CACAAGTGCCCCGAGAGATCCCTGCGTGTTCTAATCCTTGGAGACGGGGAAACCGTTGATGAAGAAGGTGAGATTGTGAT GTTGGAGGGAGAACCGGAAGTGAGTGAAGAGGACGAGGCAGTGGCTGAGTACAAATTAATGGGGGTTCTGGGTCGTATGG AGGAGCATCATACGATGAAGATTGAAGGGCAGGTTGACAATGTGAACTTACTGGTGCTTATTGACAGTGGAGCTAGCCAC AACTTCATCTCCCCAGCAGTCACCAATGCTCTGGGTTTGGTTATCACCCCTATAGCTTCCCGACACATCAGGTTAGGGGA TGGACACAGGGTGGTTACACAGGGAGTGTGTAAGGGAATTAAGGCCAGGCTGGGGAAGATTGAGGTGGTGATTGATGCCT TGGTGTTGGAACTAGGAGGTTTGGACATGGTATTGGGGGTGTCCTGGCTGAGCACACTTGGAAAAGTGGTAATGGACTGG AAACTACTCACTATGCAATTTGTCCATGGAAATCAGGTAGTCAAGTTGCAAGGGCTAGGAGGAAAAGGGAGTAATCACAG TTTTCTACACTCATTCCTCATGGACAAGCAGTACAGAGGTGGTATGGAGTGGTGGTGGTCTCATCTGAATTCCGCAGAAG TCACCAATACTGAGGTAGAAACACCAAGAGAGCTTATGGAGACACTGGAAGAGTTTCAAGAGGTATTTAGGAGCAAGATT CAACTGCCACCAGAGAGGTCTAAGGTGCATCAGATAAAGCTTTTCCCTGAGCAGGAGACCATTAATGTGAGGCCTTATAG GTATCCTCACCATCAAAAAGAAGAGATTGAGAGGCAAGTGGCAGAGTTAATGGAGGCAGGAATCATCAGACCTAGCATGA GTGCTTATTCAAGTCCTGTGATCTTGGTAAAGAAGAAAGACAAGAGCTGGAGGATGTGTGTTGACTACAGAGCTTTAAAT AAGGCCACCATTCCAGATAAGTATCCAATTCCGATAGTTGATGAGCTGCTGGATGAATTAAATGGAGCTTCAATTTTCTC TAAAATAGACCTGAAATCTGGCTATCATCAAATCAGGGTGCATGAGGATGACATAGAAAAAACTGCATTTAGAACCCATA ATGGACATTATGAATACTTAGTGATGCCATTTGGGCTGATGAATGCTCCAGCTACATTTCAAGCAGTAATGAATGATATT TTCAGACCTTACTTACGGAAATTCGTGTTGGTCTTTTTTGATGATATACTAATCTATAGTAAAGACTTACCTGAACACCT CACTCATTTGAAGTTGGTACTATCTGTCTTGTTAGCTAATTGTTTTGTGGCTAATCAGACCAAATGCAAATTTGGATGTG CTTCAATTGATTATTTGGGTCATATCATCTCGGGAGCTGGCGTGGCAGTAGATCCAGAGAAAGTAAAATGCATTATGGAT TGGCCTGTGCCCAAGAATGTTAAGGGAGTGAGGGGATTCTTGGGGCTGACCGGATACTACAGGAAATTCATCAAAGATTA TGGGAAAATGGCTAATCCTCTCACTGAGTTGACTAAGAAGGACAGTTTTTCTTGGGGACCAGAGGCAGATAGGGCTTTTC TTCAATTAAAGAGGGTAATGACATCTCCTCCTGTCTTGATACTACCCAATTTCACTCTTCCCTTTGAAGTAGAGTGTGAT GCTGCAGGGAGAGGGATTGGAGCTGTCTTAATGCAACAAAGACAACCTCTAGCTTTCTTTAGTAAAGCTTTATCAGCTGG AAACTTGGCTAAGTCAGTGTATGAAAAAGAATTAATGGCCTTGGTTTTAAGCATTCAACATTGGAGGCACTACCTATTGG GGAAAGAGTTCATAGTCTATACTGATCACAAAAGCCTTAAGCATTTCCTGCAGCAGAAAGTTTCTTCACCAGACCAACAG TGTTGGTTAGCAAAATTACTGGGTTACCAATTTCAAGTCAAATACAAACCCGGCTTGGAAAATAAGGCTGCTGATGCCTT GTCCAGGCGCTATGATGAGGTGGAGCTGCATTCTCTGATCTCATTTCCTCTCTGGAATGACCGAAAGAGACTCTTGGAGG AGATTACCCAAGATCCCTACATCCAGGACTTGCAATCTGCAGTACAGAAAGATCCTGCAAGCAAACCTGGATTTGCAGTA CAACATGGAGTTTTACTATATCATGGAAGGCTAGTCTTATCTCCTACCTCTCCTTCCATCCCATGGCTACTTGAGGAGTT TCATGGCTCACCTTCTGGGGGTCACTCTGGCTTCCTGAGGACCTATAGACGCTTGGCAACAACATTGTATTGGGTAGGAA TGCAAAAGAGGGTCAGAGACTATGTCAGAGCTTGTGATGTTTGTCAAAGACACAAATACAGCGCCTTAAGCCCTGGAGGC TTGTTACAACCTCTTCCAATCCCTAATGCTGTGTGGGAAGACTTGTCTCTTGACTTCATTACAGGTCTACCCAAATCCAA GGGCTTTGAAGCAGTACTGGTGGTTGTGGACAGGCTGTCAAAATACAGTCATTTTATTCTGCTCAAGCATCCCTATACAG CCAAGTCTATTGCAGAAGTGTTTGTAAGAGAGGTGGTGCGCCTCCATGGGATTCCTAATTCAGTCATAAGTGATAGGGAT CCTATTTTTGTTAGCCATTTCTGGTCTGAACTCTTTAAGCTGCAGGGGACCAAACTGAAAATGAGCTCGGCTTACCATCC GGAAACTGATGGACAAACAGAGGTCATAAACAGGTGTTTGGAAAGCTACCTGAGGTGTTTTGCTTCTGATCATCCCAAGT CTTGGTCACATTGGATTTCCTGGGCAGAATTTTGGTACAATACTACTTTTCATAGCTCAATTGGACAGACACCCTTTGAG GTAGTCTATGGAAGACAAGCACCCCCTATTGTCAAGTTCTTATCCAATGAGACTAAGGTAGCCGCTGTGGCCCTAGAGCT AAGTGAAAGAGATGAAGCCCTGCGACAGCTAAGGGGTCATTTACAGAAGGCTCAAGAACAAATGGCTATTTATGCAAATA AGAAGCGGAGGGATTTGTCCTTTGCAGTAGGAGAGTGGGTATTTCTCAAACTGAGACCCCACAGGCAGCATTCTGTGGTG AAGAGGATCAATCAGAAGCTTGCTGCCAGGTTTTATGGACCTTTTCAGATAGAGGCCAAGGTAGGAGCAGTTGCTTATAG GCTGAAGTTGCCTGCAGAGTCCAAAATCCACCCAGTTTTTCACATTTCTCTGTTAAAGAAGGCTATGGGAAACTATCAAG TGCAGGGTCAGTTGCCAGCGGATTTGGGGGTTGATGACACCACTGATATTTACCCTGAAGTCATAGTGGGCACTAGGACT GTCAGGCTCGGGGACAGTGAAGTGCATCAGAGCTTAGTCAAGTGGAAGCATAAGTCAATGGAGGAAGTCACCTGGGAAGA CAATGTCGTTCTAGCTGGTCAGTTTCCTGAATTCTGCCTTGAGGACAAGGCTGTTCCAATGGAGGGAGGAATTGATAGAA ATCTGAATGAAGAGGTGGGCTTAGTGGTAAATGCTTCAGTGGGCCAAGAAGAGAACAGGCCCAAGGTTTGGCAAGTCTAT AGGAGGAAACGGGGCAAGGCTGCTGAGGTGGCATTGGCTCAACAGAATTAGGTGTTAGTATAAAGTAACCAAGGGAAAGG GAATAAGATTATGCTGGATTGATAATTCTGTTATAGAGAGAGAGTAGCATCTCCCTCGGAGAGAACGCTCTAGAGCTTCT CTGGGTTGTTAGAGTTTTTCTAACAGCACACCTTATCACAATATCTTCTGTAATTGTCCACTTCAATCAATACAATTGCA TTTCTATTCCTTCATTTCATCTTCATTACTTGTTAGCTTCCTAATATCCATCATGAATGATCATGGATGGTTTTATATCT GTCACCCTTTTGCCATAGATTTGAAGAAGGAGCTGAGCAGTTTCGGTTAGATGTTGCTCAAAATCCAAATGATACAGAAG AGTCCATATGGTGTTTTCTTTGTGAAGCTCAACTATATGGGGTGGATGAAGTGAGGAAGCGATATCTCGAGGCAAGTCAT TGATTCTACAACTATGTGGTTAACATAAAAAAAGAACTTAAAAATATTCAATTCATCGTCATCTTCCTGAGTGAATTTAG GTTGGCAGAGACTCAAGGCCAGTCATGCGGGAAGCATATAACATGTTTAGAGATGGCGGGGATCCTGAAAAGGTGTGCTT TAATAATACCTTTTCAATTAAAATGCAGTTATCTCTGTTAGATGCGAGACTTTAATAAGTCCTCCCTTATGCTTAAGCTT GGTTTTCGATAGTTTGTCCTTCCTTCCCCCCATGTACATTTACCTGTTTCTAAAGGATATGTATTTTTTTTATTTGTCTC TGTTATTGGTACTCTAAGATTCATCATGCCGATGTACAATCTGACACAAGCAATTGAATTGCCTGTCTAGCTTGTAGCTG CGTTCTCCAATGGTAGAGAAGGCGAATATTTTTATGCTTCTCTATATGCTGGACTTTATTACGAATCTCAGGTATTCTTG TAACTTTCATGATCTTTCCTTTCCTGAACATAGTTAAAGATTATATGTGTGGCAAACACAACTTCAGATACATTTTCCAA GCCTACATTTTCTTCTCCGCAGTCTCGATTCTAGAAGCTGTTTTTAACGCTAACTCTATTTGGTAGAACTAGAAAATGCG TTCATGGGGGTGGTAATTTGTCAAGGAAAATCTTTTTTCTTCTTTTGAGATAATGAAAATTCAGATATGTGATGTTAAAA TAATTTTGCGCATAGTCCTGGTCTTTCCAATTTATAAGAAGGTTGTTATTTACTCTGTAAGAAACTAAGAATCAACTTGA CTTTCTCTGCATGAATAAATTTGTTAATACGAAGCTGGTTTTCTTGGGTAACATTAGATTGGTTAAAAGATGTTAAGTTA CAAAACCCTTTCCTTAAATCCCTGCAACTGCTTTATTTTCGTTTCTAGACACCTTGCATGGTGACTCATTTCCAGCCAAA CACGTGCACGCACTATACTCATCGTAGATGTTTAGTTTACTGAATTGTCAGTTTTCTGAATTGTTTAGCATAGTTGCAAA GTTGAAGAAAATGGACCAAACTGGAATGTTGTGTGATGTCATGCCAATTTTTTACTATGTGAAAAGGCTTGTTCTTTGTG TGCTTTTCATTTGGTCTGAAGCAGATTTGTAAGTTCGTTGATTCATTTTTCCATGCGTAGAATGAAACGGACGCTGCTAA AGTTCACATGGTTGCTGCATGCCAGTCTTCTTATGGGCAAAGGTTTGGATTTGATTATGTTCATTTCTTGCTACACAAAA AATGCAACTTAGAAACATGAAAGGTGTCCATGCAATCTTTAATGCAGGTCTGATGATTATATGGCTTCTCTCTCGAAGGT TCACTGTCTTTGTCGAAATTGGACCATCAGCTAAAATATTTTGTTGTATGTACATTGAATTTAGCACGATGAAGCTAATT CATAAGTTGTTATATTTACTATTGAGACGTTTAAAATAATTTATCATATTTCTTTTACCTTTTTGCTTGAGCTTGTGGCC CAAATGAATTTTGATAGACTGTCGTAGTGGAATTTTTTAGTGACATGTAATAATGAAATGTATAGAATTAGATGAGAAAA CTATCGCAACTTGACAAGCAAAGGAAAG
CDS sequence (LotjaGi5g1v0226800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGCCAATTTCTGTTATCAGTTTTCAGTTATCTCTACCTTACCACCATGTTCACTATCCACAACCTTAAACCCCCAAT TTTGGTGTCTCCTTCCCCTTGTTTGCACCACCCTTCATCATTCCCATTGCAATTACCTTCCAAAGCACCCATCTTCTGCT CCAATCCTTCAATCCTCACCCGAAGACTTTTCCTTCCTTCCGTCTCCGCCATCTGGGACGCCGTCACCGGCGGCAACAAC AACAACAATGGCCGTGAAGCCCTTCTTGCAATTCGTCGTGGAATGTCCCTCTTCAGACAGGGTGATGTTTCCGGGTCTGT TGTGGAGTTCGACAAGGCTATTCAGCTGGACCCTCGTCAAAAGGCTTATCTTTGGCAAAGGGGACTCTCACTTTACTACC TTAATAGATTTGAAGAAGGAGCTGAGCAGTTTCGGTTAGATGTTGCTCAAAATCCAAATGATACAGAAGAGTCCATATGG TGTTTTCTTTGTGAAGCTCAACTATATGGGGTGGATGAAGTGAGGAAGCGATATCTCGAGGCAAGTCATTGA
Protein sequence (LotjaGi5g1v0226800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRQFLLSVFSYLYLTTMFTIHNLKPPILVSPSPCLHHPSSFPLQLPSKAPIFCSNPSILTRRLFLPSVSAIWDAVTGGNN NNNGREALLAIRRGMSLFRQGDVSGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLNRFEEGAEQFRLDVAQNPNDTEESIW CFLCEAQLYGVDEVRKRYLEASH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 183 | 164 | - | – | |
| PANTHER | 44 | 181 | 138 | 6.9E-75 | – | |
| PANTHER | 44 | 181 | 138 | 6.9E-75 | – | |
| Gene3D | 84 | 183 | 100 | 5.0E-16 | ||
| ProSiteProfiles | 87 | 154 | 68 | 12.831 | ||
| ProSiteProfiles | 87 | 120 | 34 | 8.968 | ||
| SUPERFAMILY | 92 | 173 | 82 | 3.08E-13 | ||
| ProSiteProfiles | 121 | 154 | 34 | 6.018 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0226800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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