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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0226800 |
| Transcript ID | LotjaGi5g1v0226800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat protein; TAIR: AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q1C3L9|NLPI_YERPA Lipoprotein NlpI; TrEMBL-Plants: tr|I3SUQ3|I3SUQ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0226800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53395176..53403697) extracted from Lotus japonicus Gifu genome v1.2.
TTCAACTAACATAACTTAACTACCTAACATGATTTTTTTTTGCCAAATGAACTGGCTAGGGTTTAAAAAGGCTATCTTAT TGTCTTGGTGCTGTTTCTGTTTTGGGCTTTAAGCCCTCATGTTCAACAAAAAAAGTTAGGCTGTAATGAAACTAAGAGGG AAACATATCTCATATATAAAAAAATAAAAAAAAAAACTTGTTATGCGCCAATTTCTGTTATCAGTTTTCAGTTATCTCTA CCTTACCACCATGTTCACTATCCACAACCTTAAACCCCCAATTTTGGTGTCTCCTTCCCCTTGTTTGCACCACCCTTCAT CATTCCCATTGCAATTACCTTCCAAAGCACCCATCTTCTGCTCCAATCCTTCAATCCTCACCCGAAGACTTTTCCTTCCT TCCGTCTCCGCCATCTGGGACGCCGTCACCGGCGGCAACAACAACAACAATGGCCGTGAAGCCCTTCTTGCAATTCGTCG TGGAATGTCCCTCTTCAGACAGGGTGATGTTTCCGGGTCTGTTGTGGAGTTCGACAAGGCTATTCAGCTGGACCCTCGTC AAAAGGCTTGTAGGTTTATACATTCTTTGGAATATTCATTGATTTTTGAGTCCCATTACATGAATTTGGTCATGGATGAT GATGTGATTCTTACCAGATCTTTGGCAAAGGGGACTCTCACTTTACTACCTTAATAGGTACCCACACCACACTTCACCTC CTAATTTTATTCAATTTCATTCTTCTTTATGGTTAAGAGAAAAAACACTAGTATACTTACTCTCTATTGGGTCTAAATTA ACTCTCTGTCAAGTAACCAATTATTAAGCTTTTGGGTAAGGGTAACATGAATGATTTTATAATTTTATTTCTAACACACC CCATCCCGTTTGGGCTTGAAGCGTGAAGAATGTGCAGACTCACCTACCATGTGCTTTAGTTCATTTTCTATTAGAAGAAT TTAATGTGGCAAGAATCAAACTCTAGAGTCTAGATTGCTTGGTCATAGACGCTCTGATACCATGTCAAGTAACCAATTAT CTCAAAAGCTTAAGCTTTTGGGTACATGTATTATTATTTGTAACACTTTGAGATAAGGTTGCACGTTTGGAATTCTCGTT AGACTGAGAAATCACGTTAGTACATAAGCTACAATGTGGAGCTTCTTTGGTAACGTGCTTGGAGTGTATTCAACACACAT CCAAGCATGCTTAAAAATTAAAATCATTGTTGAAGTTTTAGTAGCAAAACCATGTGCAAATGGGTGTTAGCAAGCACAGT CACAGTATGCTATCAAAAGGAGACGGAGTTGGATTTGGATCCATTTATTTGAATAAACTATCTCCAAAGCTTAAGTTGTG TAGTGAATTGATAGAAATCTGAATGAAGAGGTGGGCTTAGTGGTAAATGCTTCAGTGGGCCAAGAAGAGAACAGGCCCAA GGTTTGGCAAGTCTATAGGAGGAAACGGGGCAAGGCTGCTGAGGTGGCATTGGCTCAACAGAATTAGGTGTTAGTATAAA GTAACCAAGGGAAAGGGAATAAGATTATGCTGGATTGATAATTCTGTTATAGAGAGAGAGTAGCATCTCCCTCGGAGAGA ACGCTCTAGAGCTTCTCTGGGTTGTTAGAGTTTTTCTAACAGCACACCTTATCACAATATCTTATGTAATTGTCCACTTC AATCAATACAATTGCATTTCTATTCCTTCATTTCATCTTCATTACTTGTTAGCTTCCTAATATCCATCAAATTGGTCCGA CCTACCGGATCAACACCGTGGAAGGAGTCTCAACAAGCTGGTAGATGCCACCGAAAATGACCGATCGAATGGAAGCTCTG GAAAACCAGATGGGAAGCGTTACGACGGCGCTGCAAGAGCTCGCTCTCCAACTGCAGCAGCAGAGCTTGACTCTCACTGA ACTGAGCAAGCAAATGGGTCGGAAGGAAACGGATCACGAAGGAGATACCCCGATAGCGGATTCACACCCCGGTGAGTCTC GCTTGGCCGGAAAGAAGGTGAAGTTGCCGGTGTTCGAAGGAGAGGATCCTGTGGCTTGGATCACGAGAGCGGAGATCTAC TTCGACGTGCAGAATACGCCGGATGAGATGCGGGTGAAGTTAACGCGATTAAGTATGGAAGGATCGACGATCCATTGGTT CAATCTGTTGATGGAGACTGAGGATAATCTATCCTGGGAGAAGCTGAAACGTGCGTTGATTGCACGCTACGGAGGAAGAA GATTGGAGAACCCTTTCGAAGAGCTATCGACATTACGACAGAAAGGAAGTGTAGACGAATTCGTCGAATCCTTTGAGTTG TTGTCATCGCAGGTAGGGAGGCTACCGGAGGACCAATACCTAGGATACTTCATGAGTGGGCTGAAGCCTGCGATCAGACG CCGAGTGCGCACACTTAATCCAGGAACTCGAATGGAGATGATGCGAATCGCGAAAGACGTGGAAGAGGAACTAAAGGAAG AAGACGAAGACGATGGCAAGAAAATGGTAAAGAGGAGCGGGTTCGATCGCTCGGGTCAAAGCAATTGGGCCGGGTCATCC GCCAATCGGGTTGGGCTTTTTAGTAGGGATGTGACCCGGTTCTCTAAACCAGGCGGGTCAATTCCAAGTCGCTCCATGAG TTCAGTAGGATCGACGACGAATTCAGCCGCGTCTCTGGGTTCCTCAACTCGAAAAGGAGAAAATGATCTCCGTACAGGAT CATCGGAGAAGTGGAAAGGGGTCCGCAGCTTCCAGGTGGATGAAATCGCTGAGCGGAGAGCCAAGGGCTTGTGCTTCAAG TGTGGGGGAAAGTATCATCCTACCCTGCACAAGTGCCCCGAGAGATCCCTGCGTGTTCTAATCCTTGGAGACGGGGAAAC CGTTGATGAAGAAGGTGAGATTGTGATGTTGGAGGGAGAACCGGAAGTGAGTGAAGAGGACGAGGCAGTGGCTGAGTACA AATTAATGGGGGTTCTGGGTCGTATGGAGGAGCATCATACGATGAAGATTGAAGGGCAGGTTGACAATGTGAACTTACTG GTGCTTATTGACAGTGGAGCTAGCCACAACTTCATCTCCCCAGCAGTCACCAATGCTCTGGGTTTGGTTATCACCCCTAT AGCTTCCCGACACATCAGGTTAGGGGATGGACACAGGGTGGTTACACAGGGAGTGTGTAAGGGAATTAAGGCCAGGCTGG GGAAGATTGAGGTGGTGATTGATGCCTTGGTGTTGGAACTAGGAGGTTTGGACATGGTATTGGGGGTGTCCTGGCTGAGC ACACTTGGAAAAGTGGTAATGGACTGGAAACTACTCACTATGCAATTTGTCCATGGAAATCAGGTAGTCAAGTTGCAAGG GCTAGGAGGAAAAGGGAGTAATCACAGTTTTCTACACTCATTCCTCATGGACAAGCAGTACAGAGGTGGTATGGAGTGGT GGTGGTCTCATCTGAATTCCGCAGAAGTCACCAATACTGAGGTAGAAACACCAAGAGAGCTTATGGAGACACTGGAAGAG TTTCAAGAGGTATTTAGGAGCAAGATTCAACTGCCACCAGAGAGGTCTAAGGTGCATCAGATAAAGCTTTTCCCTGAGCA GGAGACCATTAATGTGAGGCCTTATAGGTATCCTCACCATCAAAAAGAAGAGATTGAGAGGCAAGTGGCAGAGTTAATGG AGGCAGGAATCATCAGACCTAGCATGAGTGCTTATTCAAGTCCTGTGATCTTGGTAAAGAAGAAAGACAAGAGCTGGAGG ATGTGTGTTGACTACAGAGCTTTAAATAAGGCCACCATTCCAGATAAGTATCCAATTCCGATAGTTGATGAGCTGCTGGA TGAATTAAATGGAGCTTCAATTTTCTCTAAAATAGACCTGAAATCTGGCTATCATCAAATCAGGGTGCATGAGGATGACA TAGAAAAAACTGCATTTAGAACCCATAATGGACATTATGAATACTTAGTGATGCCATTTGGGCTGATGAATGCTCCAGCT ACATTTCAAGCAGTAATGAATGATATTTTCAGACCTTACTTACGGAAATTCGTGTTGGTCTTTTTTGATGATATACTAAT CTATAGTAAAGACTTACCTGAACACCTCACTCATTTGAAGTTGGTACTATCTGTCTTGTTAGCTAATTGTTTTGTGGCTA ATCAGACCAAATGCAAATTTGGATGTGCTTCAATTGATTATTTGGGTCATATCATCTCGGGAGCTGGCGTGGCAGTAGAT CCAGAGAAAGTAAAATGCATTATGGATTGGCCTGTGCCCAAGAATGTTAAGGGAGTGAGGGGATTCTTGGGGCTGACCGG ATACTACAGGAAATTCATCAAAGATTATGGGAAAATGGCTAATCCTCTCACTGAGTTGACTAAGAAGGACAGTTTTTCTT GGGGACCAGAGGCAGATAGGGCTTTTCTTCAATTAAAGAGGGTAATGACATCTCCTCCTGTCTTGATACTACCCAATTTC ACTCTTCCCTTTGAAGTAGAGTGTGATGCTGCAGGGAGAGGGATTGGAGCTGTCTTAATGCAACAAAGACAACCTCTAGC TTTCTTTAGTAAAGCTTTATCAGCTGGAAACTTGGCTAAGTCAGTGTATGAAAAAGAATTAATGGCCTTGGTTTTAAGCA TTCAACATTGGAGGCACTACCTATTGGGGAAAGAGTTCATAGTCTATACTGATCACAAAAGCCTTAAGCATTTCCTGCAG CAGAAAGTTTCTTCACCAGACCAACAGTGTTGGTTAGCAAAATTACTGGGTTACCAATTTCAAGTCAAATACAAACCCGG CTTGGAAAATAAGGCTGCTGATGCCTTGTCCAGGCGCTATGATGAGGTGGAGCTGCATTCTCTGATCTCATTTCCTCTCT GGAATGACCGAAAGAGACTCTTGGAGGAGATTACCCAAGATCCCTACATCCAGGACTTGCAATCTGCAGTACAGAAAGAT CCTGCAAGCAAACCTGGATTTGCAGTACAACATGGAGTTTTACTATATCATGGAAGGCTAGTCTTATCTCCTACCTCTCC TTCCATCCCATGGCTACTTGAGGAGTTTCATGGCTCACCTTCTGGGGGTCACTCTGGCTTCCTGAGGACCTATAGACGCT TGGCAACAACATTGTATTGGGTAGGAATGCAAAAGAGGGTCAGAGACTATGTCAGAGCTTGTGATGTTTGTCAAAGACAC AAATACAGCGCCTTAAGCCCTGGAGGCTTGTTACAACCTCTTCCAATCCCTAATGCTGTGTGGGAAGACTTGTCTCTTGA CTTCATTACAGGTCTACCCAAATCCAAGGGCTTTGAAGCAGTACTGGTGGTTGTGGACAGGCTGTCAAAATACAGTCATT TTATTCTGCTCAAGCATCCCTATACAGCCAAGTCTATTGCAGAAGTGTTTGTAAGAGAGGTGGTGCGCCTCCATGGGATT CCTAATTCAGTCATAAGTGATAGGGATCCTATTTTTGTTAGCCATTTCTGGTCTGAACTCTTTAAGCTGCAGGGGACCAA ACTGAAAATGAGCTCGGCTTACCATCCGGAAACTGATGGACAAACAGAGGTCATAAACAGGTGTTTGGAAAGCTACCTGA GGTGTTTTGCTTCTGATCATCCCAAGTCTTGGTCACATTGGATTTCCTGGGCAGAATTTTGGTACAATACTACTTTTCAT AGCTCAATTGGACAGACACCCTTTGAGGTAGTCTATGGAAGACAAGCACCCCCTATTGTCAAGTTCTTATCCAATGAGAC TAAGGTAGCCGCTGTGGCCCTAGAGCTAAGTGAAAGAGATGAAGCCCTGCGACAGCTAAGGGGTCATTTACAGAAGGCTC AAGAACAAATGGCTATTTATGCAAATAAGAAGCGGAGGGATTTGTCCTTTGCAGTAGGAGAGTGGGTATTTCTCAAACTG AGACCCCACAGGCAGCATTCTGTGGTGAAGAGGATCAATCAGAAGCTTGCTGCCAGGTTTTATGGACCTTTTCAGATAGA GGCCAAGGTAGGAGCAGTTGCTTATAGGCTGAAGTTGCCTGCAGAGTCCAAAATCCACCCAGTTTTTCACATTTCTCTGT TAAAGAAGGCTATGGGAAACTATCAAGTGCAGGGTCAGTTGCCAGCGGATTTGGGGGTTGATGACACCACTGATATTTAC CCTGAAGTCATAGTGGGCACTAGGACTGTCAGGCTCGGGGACAGTGAAGTGCATCAGAGCTTAGTCAAGTGGAAGCATAA GTCAATGGAGGAAGTCACCTGGGAAGACAATGTCGTTCTAGCTGGTCAGTTTCCTGAATTCTGCCTTGAGGACAAGGCTG TTCCAATGGAGGGAGGAATTGATAGAAATCTGAATGAAGAGGTGGGCTTAGTGGTAAATGCTTCAGTGGGCCAAGAAGAG AACAGGCCCAAGGTTTGGCAAGTCTATAGGAGGAAACGGGGCAAGGCTGCTGAGGTGGCATTGGCTCAACAGAATTAGGT GTTAGTATAAAGTAACCAAGGGAAAGGGAATAAGATTATGCTGGATTGATAATTCTGTTATAGAGAGAGAGTAGCATCTC CCTCGGAGAGAACGCTCTAGAGCTTCTCTGGGTTGTTAGAGTTTTTCTAACAGCACACCTTATCACAATATCTTCTGTAA TTGTCCACTTCAATCAATACAATTGCATTTCTATTCCTTCATTTCATCTTCATTACTTGTTAGCTTCCTAATATCCATCA TGAATGATCATGGATGGTTTTATATCTGTCACCCTTTTGCCATAGATTTGAAGAAGGAGCTGAGCAGTTTCGGTTAGATG TTGCTCAAAATCCAAATGATACAGAAGAGTCCATATGGTGTTTTCTTTGTGAAGCTCAACTATATGGGGTGGATGAAGTG AGGAAGCGATATCTCGAGGCAAGTCATTGATTCTACAACTATGTGGTTAACATAAAAAAAGAACTTAAAAATATTCAATT CATCGTCATCTTCCTGAGTGAATTTAGGTTGGCAGAGACTCAAGGCCAGTCATGCGGGAAGCATATAACATGTTTAGAGA TGGCGGGGATCCTGAAAAGGTGTGCTTTAATAATACCTTTTCAATTAAAATGCAGTTATCTCTGTTAGATGCGAGACTTT AATAAGTCCTCCCTTATGCTTAAGCTTGGTTTTCGATAGTTTGTCCTTCCTTCCCCCCATGTACATTTACCTGTTTCTAA AGGATATGTATTTTTTTTATTTGTCTCTGTTATTGGTACTCTAAGATTCATCATGCCGATGTACAATCTGACACAAGCAA TTGAATTGCCTGTCTAGCTTGTAGCTGCGTTCTCCAATGGTAGAGAAGGCGAATATTTTTATGCTTCTCTATATGCTGGA CTTTATTACGAATCTCAGGTATTCTTGTAACTTTCATGATCTTTCCTTTCCTGAACATAGTTAAAGATTATATGTGTGGC AAACACAACTTCAGATACATTTTCCAAGCCTACATTTTCTTCTCCGCAGTCTCGATTCTAGAAGCTGTTTTTAACGCTAA CTCTATTTGGTAGAACTAGAAAATGCGTTCATGGGGGTGGTAATTTGTCAAGGAAAATCTTTTTTCTTCTTTTGAGATAA TGAAAATTCAGATATGTGATGTTAAAATAATTTTGCGCATAGTCCTGGTCTTTCCAATTTATAAGAAGGTTGTTATTTAC TCTGTAAGAAACTAAGAATCAACTTGACTTTCTCTGCATGAATAAATTTGTTAATACGAAGCTGGTTTTCTTGGGTAACA TTAGATTGGTTAAAAGATGTTAAGTTACAAAACCCTTTCCTTAAATCCCTGCAACTGCTTTATTTTCGTTTCTAGACACC TTGCATGGTGACTCATTTCCAGCCAAACACGTGCACGCACTATACTCATCGTAGATGTTTAGTTTACTGAATTGTCAGTT TTCTGAATTGTTTAGCATAGTTGCAAAGTTGAAGAAAATGGACCAAACTGGAATGTTGTGTGATGTCATGCCAATTTTTT ACTATGTGAAAAGGCTTGTTCTTTGTGTGCTTTTCATTTGGTCTGAAGCAGATTTGTAAGTTCGTTGATTCATTTTTCCA TGCGTAGAATGAAACGGACGCTGCTAAAGTTCACATGGTTGCTGCATGCCAGTCTTCTTATGGGCAAAGGTTTGGATTTG ATTATGTTCATTTCTTGCTACACAAAAAATGCAACTTAGAAACATGAAAGGTGTCCATGCAATCTTTAATGCAGGTCTGA TGATTATATGGCTTCTCTCTCGAAGGTTCACTGTCTTTGTCGAAATTGGACCATCAGCTAAAATATTTTGTTGTATGTAC ATTGAATTTAGCACGATGAAGCTAATTCATAAGTTGTTATATTTACTATTGAGACGTTTAAAATAATTTATCATATTTCT TTTACCTTTTTGCTTGAGCTTGTGGCCCAAATGAATTTTGATAGACTGTCGTAGTGGAATTTTTTAGTGACATGTAATAA TGAAATGTATAGAATTAGATGAGAAAACTATCGCAACTTGAC
CDS sequence (LotjaGi5g1v0226800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGCCAATTTCTGTTATCAGTTTTCAGTTATCTCTACCTTACCACCATGTTCACTATCCACAACCTTAAACCCCCAAT TTTGGTGTCTCCTTCCCCTTGTTTGCACCACCCTTCATCATTCCCATTGCAATTACCTTCCAAAGCACCCATCTTCTGCT CCAATCCTTCAATCCTCACCCGAAGACTTTTCCTTCCTTCCGTCTCCGCCATCTGGGACGCCGTCACCGGCGGCAACAAC AACAACAATGGCCGTGAAGCCCTTCTTGCAATTCGTCGTGGAATGTCCCTCTTCAGACAGGGTGATGTTTCCGGGTCTGT TGTGGAGTTCGACAAGGCTATTCAGCTGGACCCTCGTCAAAAGGCTTATCTTTGGCAAAGGGGACTCTCACTTTACTACC TTAATAGATTTGAAGAAGGAGCTGAGCAGTTTCGGTTAGATGTTGCTCAAAATCCAAATGATACAGAAGAGTCCATATGG TGTTTTCTTTGTGAAGCTCAACTATATGGGGTGGATGAAGTGAGGAAGCGATATCTCGAGGTTGGCAGAGACTCAAGGCC AGTCATGCGGGAAGCATATAACATGTTTAGAGATGGCGGGGATCCTGAAAAGCTTGTAGCTGCGTTCTCCAATGGTAGAG AAGGCGAATATTTTTATGCTTCTCTATATGCTGGACTTTATTACGAATCTCAGAATGAAACGGACGCTGCTAAAGTTCAC ATGGTTGCTGCATGCCAGTCTTCTTATGGGCAAAGGTCTGATGATTATATGGCTTCTCTCTCGAAGGTTCACTGTCTTTG TCGAAATTGGACCATCAGCTAA
Protein sequence (LotjaGi5g1v0226800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRQFLLSVFSYLYLTTMFTIHNLKPPILVSPSPCLHHPSSFPLQLPSKAPIFCSNPSILTRRLFLPSVSAIWDAVTGGNN NNNGREALLAIRRGMSLFRQGDVSGSVVEFDKAIQLDPRQKAYLWQRGLSLYYLNRFEEGAEQFRLDVAQNPNDTEESIW CFLCEAQLYGVDEVRKRYLEVGRDSRPVMREAYNMFRDGGDPEKLVAAFSNGREGEYFYASLYAGLYYESQNETDAAKVH MVAACQSSYGQRSDDYMASLSKVHCLCRNWTIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 273 | 254 | - | – | |
| PANTHER | 44 | 272 | 229 | 2.3E-136 | – | |
| PANTHER | 44 | 272 | 229 | 2.3E-136 | – | |
| Gene3D | 85 | 260 | 176 | 3.4E-20 | ||
| ProSiteProfiles | 87 | 154 | 68 | 12.831 | ||
| ProSiteProfiles | 87 | 120 | 34 | 8.968 | ||
| SUPERFAMILY | 92 | 238 | 147 | 1.19E-15 | ||
| ProSiteProfiles | 121 | 154 | 34 | 6.018 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0226800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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