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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0227300 |
| Transcript ID | LotjaGi5g1v0227300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT5G27030.1 TOPLESS-related 3; Swiss-Prot: sp|Q84JM4|TPR3_ARATH Topless-related protein 3; TrEMBL-Plants: tr|Q2HW32|Q2HW32_MEDTR Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like; Found in the gene: LotjaGi5g1v0227300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53466518..53476379) extracted from Lotus japonicus Gifu genome v1.2.
AGCAAGTTTGCTTATTATGTCTGATGGATCAGTAGAAAAAGAACTACGACCCCTGAACAAACGCATCGAAGATAGCGAGC ACTTTCTCTCTCCTCTTCTTATCCATCCGCAGTCTTTCAAACCCTAGAAATTCTCCACCTCCGAGCTGAATTTCATGTGA TTTTCGTGGAGTTTAAGGATTTTTGAGCTGGATTTGGAACTGAGAGGGAGTTTGTGTTTTTTTTCTGGTTTGATTTGACG GTGGTTGGTGGAATTGGAGGTGCTCTGTGCTGTTGTTGAGGTGGTTTTTGAAGATCGGGGTTCAGAGATCGAAATTGAAC GGTGGTGTGGTTTCAGATTTGAGGGATGACTTCTTTGAGCAGGGAATTGGTGTTTCTCATACTCCAGTTTCTGGATGAGG AGAAGTTCAAAGAGTCTGTTCACAAGTGAGCCTTCTTTGCCTTCTCTCTATGTTTTTTACTCCATTTATGTTTCAGATGT CTGATACTTTTGGTGTGTGGTTGGAGTTGGTGTTGGAAATTAGATTAAAAGTGAAAATTGTTTGGAAATGAGCTGAATTT AAGAGAATTGAGGGACTGAATGTTTTCAATTTGCTGTCTTGATGTTGTTTTTTTTTTTTTTTTTGTGATTTACTATTTGA ATGTGAACAGTTGAATTATGATGTTTCATTGCAGTGTGTTGTATACTGATAACTGATTTGTATATTGAGGGTTGAATTTT ATATGGCCCTGTTTGGATAGGGACTAAGAACACTTACCGGCGCTTATCTATTAGAATAATCATTGGATAAGCTCCAACAA GTGCTCTTTAATTCGCATTCAAACAGGTTCTATATGATGAATCGATCTCCCTGCCAATTGGGCAGGGGTATTACAATGTA TATTGTTCTTTCTTCGTTGCAGTTGCTGTGCTTGGGAAAACATTTAACTATATTAGTATATGAAAGTTTAAGCATTTTGT CCAAAAATTATAAGGGTTTGTCTGATGCATGGCCACATCGAGGTATAGCACAGGAAGAACAAAGTAGTATAAGTAGCCAA ACTACCACACAACTTTTAGTTCTATGTGCTGTTTGATGGTTGATACTTGATACACAACATCAGTAGATTTGAAGGAGAGA AGGGAGAGGAAGGAAGGAGGAGGAGGGTTGAGGGAGAGAAGGAGATTTAGAGAAGAGAGCTATCAAGAGGAGAAATAAAA GGTGAGGTATTTTTTACTTTTGAATGATGTGTGTGGGAAAAGGAAATTATCCGTTGGTTGATTGAGTAGTAAATTTTAAG ACTTTCGTTGTGTTCTTCATCTTTTTTTTGTCCTGCCCCTAAGATATATAATGCCGTTGCTTGGGAATTTGAATTGAGAT GATAAAAGTATATATTGACTGCTCTTTCTCTTCCTCCTGCTAATATTTCCTGATTTTTGCAGTTTTATGTTGTAAGATTT TTCACTGTCATTTGGCATCAACTTGACTGTTAGATTCACCTTCTTAACTCATGCAGACTTGAGAAAGAATCAGGGTTCTT TTTCAATATGAAGTACTTTGAGGAAAAGGTGCAGGCTGGCGAATGGGAAGAAGTTGAGAAGTACTTAACAGGGTTTACTA AAGTTGACGATAATAGATACTCAATGAAAATATTCTTTGAAATCAGAAAGCAGAAGTATCTGGAAGCACTTGATCGGTAT ATGGAACTTGTTATCCTTTTTAATATCTTCCTTATTTTATTTGAGCTTGTTTTGAAACTTCACATCTTGTTTGGTCTATG TTTTTTTGTAAAATTATAGGCAAGACAAAGCAAAAGCTGTGGAGATATTAGTTGGTGATTTAAAAGTGTTCTCCACCTTC AATGAGGAACTATACAAAGAAATCACTCAGCTGTTAACACTTACTAATTTCAGGTAATATCTTGAATATATAATCTAATA TCAATCAGGGTCTTTTCTTGTCGAGTATGTGTTTGTACATCTCATTCATTCCTTAAATCTCCATGAATCTTGATTCTCAA CTCAGACTAGTTAAATGATAAGGATTTAACTTATGTGCACTGCCAATGTATTTCTTTACACAGTAATCTAGTTTTATTTC GCCACATCAGAAAATAAATTGTTATTTTAATTTAAACAAAAAAAGAATGTCACTACTTCTAGAATGTGGTCCTACGGTGC ATCAAAATTATACTCAAATGGTAAACATGACAATTGAATATATTGTTTCATGACAGAGAGAATGAGCAGCTGTCTAAATA TGGTGATACCAAAACTGCTAGGAGCATTATGTTGATAGAACTAAAAAAGCTCATAGAGGCAAATCCTCTTTTCCGTGATA AGCTTGTCTTCCCTACCCTCAGGTCATCAAGACTGCGAACTTTAATCAATCAAAGGTATATGATTAAGGCGTTTAAGCTT TCTAATCTCTCTGTCTCTCTATTATGCTATTTTTTTATTAATTCTACTTAATTAGTTTGACTCTGTCTTTTTTTACCCAT ATGGCTCATGGTGCCGATGCAACTGGTAAATGAAAAGTAAATTATTTGGCTTTTGTTTTGTGGACGTGTAAATAACTAGC ATATTCAGTATATTTTATGATGTGTTTTTTGTTATCGGTTTAATTGGTCAATAATGAGAATTCTAAATGTTTCAAGCTCC TTTTTTTATTGATTCTTCTAATTTGGACTTTTAGCATGTTATGCCTTGCTTTCTCTATTTTGAATTTTGATCAATTAATC TATTTATGTCACTTGTCAATGCAGTCTGAACTGGCAGCACCAGCTCTGTAAAAACCCGAAGCCAAATCCAGATATAAAGA CTTTATTTACAGATCATACTTGTGCACCTCCTAATGGTCCTCTGGCACCAACCCCCATCAACCTTCCGATTGCTGCACTC GCAAAGCCTGCTGCTTATACTTCACTTGGAGCTCACGGTGTATGATATACCTTGCATTTAAAACAAGTGGCTATTACATT TTCAATTTATTCATAATCTAATTGTTACTTTGTTAATTAATTATTTTGTATAGCCCTTCCCTCCTGTTGCTGCAACTGCT AATGCTAATGCTTTGGCTGGTTGGATGGCCAATGCCTCAGCTTCGTCATCTGTCCAAGCAGCTGTTGCCACAGCGTCAAC TATTCCAGTGCCACAGAATCAAGGTTAAAATAGCAGTAGCCCTATTATTTTTAAAAACATTAAAATAAAATTCTTACCCG ATTTTTTCCAGAATCTCTCTCAAGTCCCATGAAATTTACATGCTATGCACCCTTGTTTCTTATATTCTTTTAGCTTAAGT TCAAGAAAGGTTTGTTATCATTTGTGTCTTTGCAAATGTATTAACTTAGCTAAGTCAGCAGGAGAATATTTTCTTGTTGT AGAATTTACTTATTCAATAATTTCACAAGTGGATGCCATGCCATGGCTTGCTTTTTTAAACAGTGTCTATCTTGAAACGT CCTAAAACACCTCCAGCAACTCCTGGGATGGTTGATTATCAGAATGCTGATCATGAACAGCTAATGAAAAGGCTTCGCCC TAATCATTCTGTAGAGGAGGTAATTTTTTATAAATTTCAGTTCAAGAGAAATACTAGCAATTCACTGTCTAACACGCTTT TTCTAACACTGTTTTAGTTGAAATTCACGTGAGATCCACGACATCATATGGGTCCTACTCCCAATTTGGTCGGACCCACT TGAATTTCAACCAATAAGAAAGAATGTGTTGAAAAAGAGTGTTAGAGATTGTGTACCCATTCTTCTTCTATTTATTTTCT TTGCTTCACATGTTTCACAATACCTGGTATTTTTCTGCTATTTTGACTTCTAATGTTTGGCAACTCATCAGTATGGTTCA TTTATAATATCAGATGTCATATCCTGTGGCTCGACAAGCCTCTTGGTCATTGGATGATCTGCCAAGAACGGTGACTATGA CTTTGCATCAGGGGTCCTCTGTTACAAGCATGGATTTTCATCCTTCTCACCATACCTTACTTCTTGGTATTGTTTATCAT GCTTGTACTATGTGCAATATCTCAGTTGCTAAAATATTGACAAAATAATATAGCTTATTTTTTTCTTCTTCTAATGGTAT ATATTTCCCTGGAGCAGTTGGTTCTAATAATGGTGAGATTACCCTCTGGGAACTCAGTTTGCGAGAAAGGTTGGTCTCAA AGCCGTTCAAGTTATGGGATGCGTCAGCAAGCATGCTACCATTTCAGGTTTCATACAGTGCAGTATTCTTTTTAATGTTG CAGCACCCTTATTTATCAGTACCAAGAAAACTAGTCCAGCTTAAGCTATCATGGCCACTATATGATATAATGCTTGGCCA TTAGTTTTGGTACTTGAAAATTCGGAACTTTTGGAATTTATAATTGAGAACTTTGCAGGCAGCTGCGGTCAAGGATGCAC CTATTTCTGTCAGTCGTGTCACGTGGAGCCCTGATGGAAGTTTTGTAGGTATGTGACTTTTTTCTGAAACCATGTTGAAG CTTTCCTGTCAGGTGTATATCTAACTGGTTGCTTTTCTTTAGGTGTTGCTTTTACTAAACATTTGATTCATTTATATGCC TACACTGGATCAAATGACCTAGCCCAGCGCATAGAGGTGATGTACTTCTCATAAAAAATAGATTAAGTTTTTGTTGCAGT TTGATTTACATTTCTTTGTCGATGCAGGTTGATGCCCATATTGGTGGTGTGAATGATTTGGCATTTGCTCATCCAAATAA ACAGCTATGTATTGTGACTTGTGGGGACGATAAATTGATAAAGGTGTGTGCCTTATAATTTTGGATCTTGCAAAGGTTAT CTAGTTTTCTAAAGAAGAAACTCTTGTAGGTGTGGGATACAAATGGCCGAAGACTATTTACCTTTGAGGGGCATGAGGCG CCTGTATATTCTATTTGTCCTCATCACAAAGAGAGCATTCAGGTAATAAAATAGATATCATTATTGAGGCACCTATAATT TTAATGTTTATTTCGGGATGGTTGCGTGCTATAATTTGATAGATTTTTTGCTCTATGTAATGTACCTGTATGTGTAATTA TTTTTTCATTAAACTCATAAATGTGGCTTTTACTTATAGTAGTCTTTGAAAATTACAGCCACCATCCTATTACTCATATA TTGGCTCCATAACTGGAGAATAATGTGTTTCTTAACTTCTTGCAAGCTATATATACTAATACACATGTGGAAACTAAAGG TGGCTACTGTAACTTTTCAGTTTATATTTTCAACTGCCGTTGATGGAAAAATAAAGGCTTGGTTGTATGATAACATGGGT TCTAGGGTTGACTATGATGCCCCTGGTCATTGGTGTACTACGATGCTTTACAGTGCTGATGGAAGTAGGTAAGTTGGATT TGTATGAGGGTAATTATTTTGTTGTCAAATTCAATGGATAATTGAGTGTATTTTATTGAACTAACTCATGTCTAACAATT TATTTTCCCCTCCTTTCTCCAGATTGTTTTCTTGTGGGACAAGTAAAGATGGAGAGTCTTTTCTTGTTGAATGGAATGAA AGTGAAGGAGCCATTAAGAGAACATACAATGGATTCAGAAAGAAATCTGCCGGTGTTGTCCAGTTTGACACAACCCAAAA TCGCTTCTTGGCTGCAGGCGAAGACGGCCAAGTGAAGTTTTGGGACATGGACAATATAAATCTTCTTGCAAGCACTGATG CAGATGGTGGATTACAGGTCAGTATTATGGTGAACTGTTCTTGTGGAGTATAACTATTCTTTATAAAACATCCTGTGACC TGTATATGATTGTATGAATCTACTCAGGGCCTTCCACGCTTGAGATTCAATAAGGAAGGAAATATTCTTGCTGTTACCAC TATGGACAATGGATTCAAGATACTTGCTAATGCTACTGGTCTTAGATCCTTAAGAGCAATTGAAACTCCAGCATTTGAAG CATTGCGGACGCCCATTGAATCTGCTGCAGTCAAGGTAGTTATATAGTACTCTAAACCTTTGCTTGGTTCCTGATGTTTA GAGCAAAATATGTGAACTGTCCACTTTGTTTATGTCATATAGGTATCTGCCTCTTCTGTTAATGTTAGTCCTATCAACTG CAAAGTGGAAAGAAGCTCTCCTGTCAGGCCTTCTCCAATTCTTGTATGAACTTAATCCTGTCCTGTGACCTTAATAATCA TCATTATGACTTTTACAGTGATATTGGTAGATGGTTCATTTTACGGCATCTTAATACTTGTTTGTAATTCATGGATTGGT TTTGGATTTTTCGATCCAGAATGGAGTTGATCCCGTGGGTCGAAATGTAGAGAGACCAAGAACCGTGGAAGATGTAACAG ATAGGACTAGACAATGGCAACCAACTGAAATTCTGGATACTGTCCAATGTCGGTCAGTTAGCTTGCCTGACAGCATGGAG TCTTTCAGCAAGGTAGATTGACTGATGAACATATGAGATTGTCATTATTCTATTGCAAACTTCATGTGATGTACGCTGAT TTAATGCTCTGATCCATATATAGGTCATCCGACTTTTATATACAAATTCTGGTGTTGGTATTTTGGCCCTTGGTTCAAAT GGTATCCAGAAGCTTTGGAAATGGGCTCGCAATGAACACAATCCTACTGGGAAGGTAGTGTTAAGCAAATAATTACTTGG CATATTTCCTCCCTTCATTCCTTTTTTATTCTTTATACTTTTTATTAGTTTTTTCCTTTAAATAGAGAACTTAATTCTGA AGTTTATTTCATTACAGGCTACCGCCAGTGTTGTTCCACAACAGTGGCAACCCAACAGTGGTCTTCTTATGACTAATGAT ATCTCAGGTGTAAACCTTGAAGAAGCGGTCCCTTGCATTGCACTCTCAAAAAATGACTCATATGTCATGTCTGCCTGTGG CGGAAAGGTTTCACTATTTAACATGATGACATTCAAGGTGTGTCTGGATAAACAACCCTGATGTTCCATTTAATTGCTTG GTTAACTGGTTACTTACAGTTCACATTTTTATAGGTAATGACCACATTTATGCAACCACCTCCTGCATCTACCTTTCTAG CTTTCCATCCTCAGGATAACAACATTATTGCCATTGGGATGGAGGATTCAACCATTCACATCTATAATGTCAGAGTGGAT GAGGTGATTTTGTCTTTAACTGCTTATTTTTTTCTGTTCAGATCTGCACAATCATCTCTAAATAATCTCACAAAACACAA TCCCCCCTGCCTTCCTCCTTTGTGGCTATGTACCAGGTGAAATCAAAATTAAAGGGTCACCAGAAGCGAATAACTGGTTT GGCCTTCTCAACCAATCTTAACATCCTTGTCTCATCTGGTGCTGATGCTCAAGTAAGTCTTTTGACCTTTCTACTTTCTT GCTATATTCAGAGTGGCATGGAAAGCCTTTTATGCCGATTAGTTAGCCCCTAATAATTTGTTTTGGATCTTTTTTGTTGG TTATCCTAGTTTCCATTATTTGTTATTATCATTGTTTTGTTAGATCTGTTTTTCAATTTAAAGGGTGCCAGAAAAAGTCT AGCTTGTGGATTCTGGACTATTATGAAATTAAATAAAAATCTACTTCAGTAGAATTGAGTTACTAGAAGGTGCCAAGTGC CAACACCTGCGGGGTGTTATTCAAAATCATTTTCTCTTTACTTTTGTTTTGCCTAGTTGACTCTAAGCATTTTTTTTGTT CTCTCAGTTTACCTTTTTTATTGTAATGGTTTTGTATCCAGATTGAGTTTAACTAAGTCTTTATTGGATTCTTGTTTTCT GTTTTCCTATATATCTATCCAAGGAGTTCTTTGGTTAGCTGAAAAATGGTTGAAAAGCTTGTACATTATGATTGGATGCA CTTTTGTGCAAGTTTGTTCCTGGTTTGCTGCTCTTGATAAATTTGTGGTTATTCACTTATTCTTTTAGAATATTTGTGCT TCTACTAATGCTCTTTTCAATTCAAATGCTTTATTTTTCCAGTAGGAAACATTGCCCATTGTTATGCTCAACACTTTTGC CATTTCTGGTTTTAAGAATTTCTATTATGTTGGCCAGCTTTGCGTGTGGAGCATTGATACATGGGAGAAAAGAAAATCAA TTCCATTACAACTACCTGCGGGAAGGTCACCTGTTGGTGATACACGGGTTCAGTTCCATTCGGATCAACTTCGCTTATTG GTGGTCCATGAGACTCAGTTGGCAGTATATGATGCCTTAAAGATGGAACGCATTCGGCAGGTAGGCAGTTTTTTCCAGTA ATGATAGAGCTTCTTGTAGCTGACAAAATTGAAATTAAGATATGCTCCTAAATTGTTTTTGCTGCAGTGGGTTCCCCAAG ATGCTCTGTCTGCTCCCATATCATGTGCAGTTTATTCTTGCAACAGTCAGTTAATATATGCTACATTTTGCGATGCAAAC GTTGGGGTTTTCGATGCTGATACCTTGAGACTAAGATGTCGAATTGCACCATCTGTATGCTTGTCATCTGCTGCTTTAAG CGGGTATGTATCAGCTTAGTAGATTGCAATTAAATTAATCTTTATTGTATTTTAAATTTTGAACATTATATACAATGATG CTTTTTGTGAAATGACTCGGTAAAAAATTATAACTTGATACATGATATTGGTTACTTTATAAATTTCTAGATATTAATAT GGTATTCTTAATACTTTCAATTTAAAAGATCATCTGGACTACGTTTTTTTTATGAAAAATTAAGGATTTTACTCCTCTAA CCTCACAAAGTAAGCCATCACAATCAACGGTTGAAATTTTGATCTTATACTTGTACAAGAGTGTTCTTTAAGTCTCACAA AGTAAGTCTCAATCAATGGTTGCAATGCTTTACTTTACTCTCTAAAGTAACTCTCTCATGGGCTAAATCTGAAAAACAAA TATCCTTCCTCTGATTAGGGTGGGTGGTATTGTTTATCTGCCGCTGCAAAATTTGTGCCGGTGACATTTTGATCCGTGTT TGTGTATTGCAGAAACCAGGCTGTGTATCCTTTTGTGGTTGCGACTCATCCACTAGAACCTAACCAGTTTGCTGTTGGGT TAACTGATGGGTCTGTCAGAGTGATAGAACCTACTGAATCAGAAGGTAAGTGGGGATCTTCTCCACCTGTGGACAATGGA ATATTGAATGGTAGGACAGCTTCTTCATCTACAACAAGCAACCACACTGCCGATCAGGCCCAAAGATAAGATTCATTGTA GTATAGTAGCGTAGTTCTTGCCATTTGTAAGTTTATCAGCCTAGGTATTTATATTTTGATTCACCATTTTGTCTCATCAA TATCAGGTCAGCTTGGACATAAAATGATAAATTTTTAGATGTACCCTCTTGTATACCTTAATTTATTCTAGTTAAACTTA AATTTTATGTTTATATTTCATTTCATTGGGATGTTATTGTATTTTTTTAAAGAGGATGTTATTGTTTTTTTTTTAAACAG AGGATGTTAATTTTCCTGGCTTTTTCTTAATATATCTTAGAGTACTACACTTCACTTTCACTACCCTAAGCTTTGCCAAT ATGATGACATTAAACTAAACTCCATTCTTCTTTAAAATTACACTTCACCTCACCTCCTTTCAACTTTAACAATAGAATAT CAGAATTTGTCACAAAATCAATTTGCTAAAACTATTCCTTGAATAAGAATTAGTAATAAATTTTGAAGAGATTTTTTCTG TCGCAAGTTTTGTCACTAATTTACATATTTACTACTTCATCGTAAAATAGTCAATATTAGCGACTAATTTTATTTACATC TCTAGAATATGTCGCTATTTGCATGTATTAGTGACAAATTGTAGAGATGAAAAATAACGTGTAGTTAAATTGACGGATTT AAATTGGTGACAATATTTGCGA
CDS sequence (LotjaGi5g1v0227300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTCTTTGAGCAGGGAATTGGTGTTTCTCATACTCCAGTTTCTGGATGAGGAGAAGTTCAAAGAGTCTGTTCACAA ACTTGAGAAAGAATCAGGGTTCTTTTTCAATATGAAGTACTTTGAGGAAAAGGTGCAGGCTGGCGAATGGGAAGAAGTTG AGAAGTACTTAACAGGGTTTACTAAAGTTGACGATAATAGATACTCAATGAAAATATTCTTTGAAATCAGAAAGCAGAAG TATCTGGAAGCACTTGATCGGCAAGACAAAGCAAAAGCTGTGGAGATATTAGTTGGTGATTTAAAAGTGTTCTCCACCTT CAATGAGGAACTATACAAAGAAATCACTCAGCTGTTAACACTTACTAATTTCAGAGAGAATGAGCAGCTGTCTAAATATG GTGATACCAAAACTGCTAGGAGCATTATGTTGATAGAACTAAAAAAGCTCATAGAGGCAAATCCTCTTTTCCGTGATAAG CTTGTCTTCCCTACCCTCAGGTCATCAAGACTGCGAACTTTAATCAATCAAAGTCTGAACTGGCAGCACCAGCTCTGTAA AAACCCGAAGCCAAATCCAGATATAAAGACTTTATTTACAGATCATACTTGTGCACCTCCTAATGGTCCTCTGGCACCAA CCCCCATCAACCTTCCGATTGCTGCACTCGCAAAGCCTGCTGCTTATACTTCACTTGGAGCTCACGGTCCCTTCCCTCCT GTTGCTGCAACTGCTAATGCTAATGCTTTGGCTGGTTGGATGGCCAATGCCTCAGCTTCGTCATCTGTCCAAGCAGCTGT TGCCACAGCGTCAACTATTCCAGTGCCACAGAATCAAGTGTCTATCTTGAAACGTCCTAAAACACCTCCAGCAACTCCTG GGATGGTTGATTATCAGAATGCTGATCATGAACAGCTAATGAAAAGGCTTCGCCCTAATCATTCTGTAGAGGAGATGTCA TATCCTGTGGCTCGACAAGCCTCTTGGTCATTGGATGATCTGCCAAGAACGGTGACTATGACTTTGCATCAGGGGTCCTC TGTTACAAGCATGGATTTTCATCCTTCTCACCATACCTTACTTCTTGTTGGTTCTAATAATGGTGAGATTACCCTCTGGG AACTCAGTTTGCGAGAAAGGTTGGTCTCAAAGCCGTTCAAGTTATGGGATGCGTCAGCAAGCATGCTACCATTTCAGGCA GCTGCGGTCAAGGATGCACCTATTTCTGTCAGTCGTGTCACGTGGAGCCCTGATGGAAGTTTTGTAGGTGTTGCTTTTAC TAAACATTTGATTCATTTATATGCCTACACTGGATCAAATGACCTAGCCCAGCGCATAGAGGTTGATGCCCATATTGGTG GTGTGAATGATTTGGCATTTGCTCATCCAAATAAACAGCTATGTATTGTGACTTGTGGGGACGATAAATTGATAAAGGTG TGGGATACAAATGGCCGAAGACTATTTACCTTTGAGGGGCATGAGGCGCCTGTATATTCTATTTGTCCTCATCACAAAGA GAGCATTCAGTTTATATTTTCAACTGCCGTTGATGGAAAAATAAAGGCTTGGTTGTATGATAACATGGGTTCTAGGGTTG ACTATGATGCCCCTGGTCATTGGTGTACTACGATGCTTTACAGTGCTGATGGAAGTAGATTGTTTTCTTGTGGGACAAGT AAAGATGGAGAGTCTTTTCTTGTTGAATGGAATGAAAGTGAAGGAGCCATTAAGAGAACATACAATGGATTCAGAAAGAA ATCTGCCGGTGTTGTCCAGTTTGACACAACCCAAAATCGCTTCTTGGCTGCAGGCGAAGACGGCCAAGTGAAGTTTTGGG ACATGGACAATATAAATCTTCTTGCAAGCACTGATGCAGATGGTGGATTACAGGGCCTTCCACGCTTGAGATTCAATAAG GAAGGAAATATTCTTGCTGTTACCACTATGGACAATGGATTCAAGATACTTGCTAATGCTACTGGTCTTAGATCCTTAAG AGCAATTGAAACTCCAGCATTTGAAGCATTGCGGACGCCCATTGAATCTGCTGCAGTCAAGGTATCTGCCTCTTCTGTTA ATGTTAGTCCTATCAACTGCAAAGTGGAAAGAAGCTCTCCTGTCAGGCCTTCTCCAATTCTTAATGGAGTTGATCCCGTG GGTCGAAATGTAGAGAGACCAAGAACCGTGGAAGATGTAACAGATAGGACTAGACAATGGCAACCAACTGAAATTCTGGA TACTGTCCAATGTCGGTCAGTTAGCTTGCCTGACAGCATGGAGTCTTTCAGCAAGGTCATCCGACTTTTATATACAAATT CTGGTGTTGGTATTTTGGCCCTTGGTTCAAATGGTATCCAGAAGCTTTGGAAATGGGCTCGCAATGAACACAATCCTACT GGGAAGGCTACCGCCAGTGTTGTTCCACAACAGTGGCAACCCAACAGTGGTCTTCTTATGACTAATGATATCTCAGGTGT AAACCTTGAAGAAGCGGTCCCTTGCATTGCACTCTCAAAAAATGACTCATATGTCATGTCTGCCTGTGGCGGAAAGGTTT CACTATTTAACATGATGACATTCAAGGTAATGACCACATTTATGCAACCACCTCCTGCATCTACCTTTCTAGCTTTCCAT CCTCAGGATAACAACATTATTGCCATTGGGATGGAGGATTCAACCATTCACATCTATAATGTCAGAGTGGATGAGGTGAA ATCAAAATTAAAGGGTCACCAGAAGCGAATAACTGGTTTGGCCTTCTCAACCAATCTTAACATCCTTGTCTCATCTGGTG CTGATGCTCAACTTTGCGTGTGGAGCATTGATACATGGGAGAAAAGAAAATCAATTCCATTACAACTACCTGCGGGAAGG TCACCTGTTGGTGATACACGGGTTCAGTTCCATTCGGATCAACTTCGCTTATTGGTGGTCCATGAGACTCAGTTGGCAGT ATATGATGCCTTAAAGATGGAACGCATTCGGCAGTGGGTTCCCCAAGATGCTCTGTCTGCTCCCATATCATGTGCAGTTT ATTCTTGCAACAGTCAGTTAATATATGCTACATTTTGCGATGCAAACGTTGGGGTTTTCGATGCTGATACCTTGAGACTA AGATGTCGAATTGCACCATCTGTATGCTTGTCATCTGCTGCTTTAAGCGGAAACCAGGCTGTGTATCCTTTTGTGGTTGC GACTCATCCACTAGAACCTAACCAGTTTGCTGTTGGGTTAACTGATGGGTCTGTCAGAGTGATAGAACCTACTGAATCAG AAGGTAAGTGGGGATCTTCTCCACCTGTGGACAATGGAATATTGAATGGTAGGACAGCTTCTTCATCTACAACAAGCAAC CACACTGCCGATCAGGCCCAAAGATAA
Protein sequence (LotjaGi5g1v0227300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSLSRELVFLILQFLDEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLTGFTKVDDNRYSMKIFFEIRKQK YLEALDRQDKAKAVEILVGDLKVFSTFNEELYKEITQLLTLTNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFRDK LVFPTLRSSRLRTLINQSLNWQHQLCKNPKPNPDIKTLFTDHTCAPPNGPLAPTPINLPIAALAKPAAYTSLGAHGPFPP VAATANANALAGWMANASASSSVQAAVATASTIPVPQNQVSILKRPKTPPATPGMVDYQNADHEQLMKRLRPNHSVEEMS YPVARQASWSLDDLPRTVTMTLHQGSSVTSMDFHPSHHTLLLVGSNNGEITLWELSLRERLVSKPFKLWDASASMLPFQA AAVKDAPISVSRVTWSPDGSFVGVAFTKHLIHLYAYTGSNDLAQRIEVDAHIGGVNDLAFAHPNKQLCIVTCGDDKLIKV WDTNGRRLFTFEGHEAPVYSICPHHKESIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSRLFSCGTS KDGESFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDGQVKFWDMDNINLLASTDADGGLQGLPRLRFNK EGNILAVTTMDNGFKILANATGLRSLRAIETPAFEALRTPIESAAVKVSASSVNVSPINCKVERSSPVRPSPILNGVDPV GRNVERPRTVEDVTDRTRQWQPTEILDTVQCRSVSLPDSMESFSKVIRLLYTNSGVGILALGSNGIQKLWKWARNEHNPT GKATASVVPQQWQPNSGLLMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMQPPPASTFLAFH PQDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSIPLQLPAGR SPVGDTRVQFHSDQLRLLVVHETQLAVYDALKMERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRL RCRIAPSVCLSSAALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVRVIEPTESEGKWGSSPPVDNGILNGRTASSSTTSN HTADQAQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1128 | 1128 | 0.0 | – | |
| PANTHER | 1 | 1128 | 1128 | 0.0 | ||
| SMART | 4 | 36 | 33 | 6.1E-5 | ||
| ProSiteProfiles | 4 | 36 | 33 | 10.144 | ||
| ProSiteProfiles | 34 | 92 | 59 | 13.23 | ||
| SMART | 34 | 92 | 59 | 3.0E-13 | ||
| Gene3D | 328 | 387 | 60 | 2.9E-5 | ||
| SMART | 335 | 374 | 40 | 6.0E-4 | ||
| ProSiteProfiles | 341 | 383 | 43 | 9.439 | ||
| ProSiteProfiles | 341 | 623 | 283 | 12.921 | ||
| SUPERFAMILY | 343 | 947 | 605 | 7.85E-43 | ||
| SMART | 397 | 435 | 39 | 150.0 | ||
| Gene3D | 407 | 670 | 264 | 1.2E-33 | ||
| SMART | 439 | 482 | 44 | 0.0012 | ||
| Pfam | 448 | 482 | 35 | 0.0023 | ||
| ProSiteProfiles | 448 | 482 | 35 | 8.771 | ||
| ProSitePatterns | 469 | 483 | 15 | - | ||
| SMART | 484 | 525 | 42 | 0.0081 | ||
| SMART | 528 | 571 | 44 | 130.0 | ||
| SMART | 574 | 614 | 41 | 0.23 | ||
| ProSiteProfiles | 592 | 623 | 32 | 9.64 | ||
| SMART | 821 | 857 | 37 | 280.0 | ||
| Gene3D | 828 | 1102 | 275 | 6.2E-31 | ||
| SMART | 860 | 900 | 41 | 2.1 | ||
| ProSiteProfiles | 867 | 951 | 85 | 15.267 | ||
| SMART | 903 | 942 | 40 | 6.5E-6 | ||
| Pfam | 909 | 942 | 34 | 0.0011 | ||
| ProSiteProfiles | 910 | 951 | 42 | 13.416 | ||
| SUPERFAMILY | 966 | 1094 | 129 | 5.13E-7 | ||
| SMART | 992 | 1034 | 43 | 54.0 | ||
| SMART | 1048 | 1089 | 42 | 87.0 | ||
| MobiDBLite | 1091 | 1128 | 38 | - | – | |
| MobiDBLite | 1105 | 1128 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi5g1v0227300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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