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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0227300 |
| Transcript ID | LotjaGi5g1v0227300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT5G27030.1 TOPLESS-related 3; Swiss-Prot: sp|Q84JM4|TPR3_ARATH Topless-related protein 3; TrEMBL-Plants: tr|Q2HW32|Q2HW32_MEDTR Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like; Found in the gene: LotjaGi5g1v0227300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53466863..53475706) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTTCTTTGAGCAGGGAATTGGTGTTTCTCATACTCCAGTTTCTGGATGAGGAGAAGTTCAAAGAGTCTGTTCACAA GTGAGCCTTCTTTGCCTTCTCTCTATGTTTTTTACTCCATTTATGTTTCAGATGTCTGATACTTTTGGTGTGTGGTTGGA GTTGGTGTTGGAAATTAGATTAAAAGTGAAAATTGTTTGGAAATGAGCTGAATTTAAGAGAATTGAGGGACTGAATGTTT TCAATTTGCTGTCTTGATGTTGTTTTTTTTTTTTTTTTTGTGATTTACTATTTGAATGTGAACAGTTGAATTATGATGTT TCATTGCAGTGTGTTGTATACTGATAACTGATTTGTATATTGAGGGTTGAATTTTATATGGCCCTGTTTGGATAGGGACT AAGAACACTTACCGGCGCTTATCTATTAGAATAATCATTGGATAAGCTCCAACAAGTGCTCTTTAATTCGCATTCAAACA GGTTCTATATGATGAATCGATCTCCCTGCCAATTGGGCAGGGGTATTACAATGTATATTGTTCTTTCTTCGTTGCAGTTG CTGTGCTTGGGAAAACATTTAACTATATTAGTATATGAAAGTTTAAGCATTTTGTCCAAAAATTATAAGGGTTTGTCTGA TGCATGGCCACATCGAGGTATAGCACAGGAAGAACAAAGTAGTATAAGTAGCCAAACTACCACACAACTTTTAGTTCTAT GTGCTGTTTGATGGTTGATACTTGATACACAACATCAGTAGATTTGAAGGAGAGAAGGGAGAGGAAGGAAGGAGGAGGAG GGTTGAGGGAGAGAAGGAGATTTAGAGAAGAGAGCTATCAAGAGGAGAAATAAAAGGTGAGGTATTTTTTACTTTTGAAT GATGTGTGTGGGAAAAGGAAATTATCCGTTGGTTGATTGAGTAGTAAATTTTAAGACTTTCGTTGTGTTCTTCATCTTTT TTTTGTCCTGCCCCTAAGATATATAATGCCGTTGCTTGGGAATTTGAATTGAGATGATAAAAGTATATATTGACTGCTCT TTCTCTTCCTCCTGCTAATATTTCCTGATTTTTGCAGTTTTATGTTGTAAGATTTTTCACTGTCATTTGGCATCAACTTG ACTGTTAGATTCACCTTCTTAACTCATGCAGACTTGAGAAAGAATCAGGGTTCTTTTTCAATATGAAGTACTTTGAGGAA AAGGTGCAGGCTGGCGAATGGGAAGAAGTTGAGAAGTACTTAACAGGGTTTACTAAAGTTGACGATAATAGATACTCAAT GAAAATATTCTTTGAAATCAGAAAGCAGAAGTATCTGGAAGCACTTGATCGGTATATGGAACTTGTTATCCTTTTTAATA TCTTCCTTATTTTATTTGAGCTTGTTTTGAAACTTCACATCTTGTTTGGTCTATGTTTTTTTGTAAAATTATAGGCAAGA CAAAGCAAAAGCTGTGGAGATATTAGTTGGTGATTTAAAAGTGTTCTCCACCTTCAATGAGGAACTATACAAAGAAATCA CTCAGCTGTTAACACTTACTAATTTCAGGTAATATCTTGAATATATAATCTAATATCAATCAGGGTCTTTTCTTGTCGAG TATGTGTTTGTACATCTCATTCATTCCTTAAATCTCCATGAATCTTGATTCTCAACTCAGACTAGTTAAATGATAAGGAT TTAACTTATGTGCACTGCCAATGTATTTCTTTACACAGTAATCTAGTTTTATTTCGCCACATCAGAAAATAAATTGTTAT TTTAATTTAAACAAAAAAAGAATGTCACTACTTCTAGAATGTGGTCCTACGGTGCATCAAAATTATACTCAAATGGTAAA CATGACAATTGAATATATTGTTTCATGACAGAGAGAATGAGCAGCTGTCTAAATATGGTGATACCAAAACTGCTAGGAGC ATTATGTTGATAGAACTAAAAAAGCTCATAGAGGCAAATCCTCTTTTCCGTGATAAGCTTGTCTTCCCTACCCTCAGGTC ATCAAGACTGCGAACTTTAATCAATCAAAGGTATATGATTAAGGCGTTTAAGCTTTCTAATCTCTCTGTCTCTCTATTAT GCTATTTTTTTATTAATTCTACTTAATTAGTTTGACTCTGTCTTTTTTTACCCATATGGCTCATGGTGCCGATGCAACTG GTAAATGAAAAGTAAATTATTTGGCTTTTGTTTTGTGGACGTGTAAATAACTAGCATATTCAGTATATTTTATGATGTGT TTTTTGTTATCGGTTTAATTGGTCAATAATGAGAATTCTAAATGTTTCAAGCTCCTTTTTTTATTGATTCTTCTAATTTG GACTTTTAGCATGTTATGCCTTGCTTTCTCTATTTTGAATTTTGATCAATTAATCTATTTATGTCACTTGTCAATGCAGT CTGAACTGGCAGCACCAGCTCTGTAAAAACCCGAAGCCAAATCCAGATATAAAGACTTTATTTACAGATCATACTTGTGC ACCTCCTAATGGTCCTCTGGCACCAACCCCCATCAACCTTCCGATTGCTGCACTCGCAAAGCCTGCTGCTTATACTTCAC TTGGAGCTCACGGTGTATGATATACCTTGCATTTAAAACAAGTGGCTATTACATTTTCAATTTATTCATAATCTAATTGT TACTTTGTTAATTAATTATTTTGTATAGCCCTTCCCTCCTGTTGCTGCAACTGCTAATGCTAATGCTTTGGCTGGTTGGA TGGCCAATGCCTCAGCTTCGTCATCTGTCCAAGCAGCTGTTGCCACAGCGTCAACTATTCCAGTGCCACAGAATCAAGGT TAAAATAGCAGTAGCCCTATTATTTTTAAAAACATTAAAATAAAATTCTTACCCGATTTTTTCCAGAATCTCTCTCAAGT CCCATGAAATTTACATGCTATGCACCCTTGTTTCTTATATTCTTTTAGCTTAAGTTCAAGAAAGGTTTGTTATCATTTGT GTCTTTGCAAATGTATTAACTTAGCTAAGTCAGCAGGAGAATATTTTCTTGTTGTAGAATTTACTTATTCAATAATTTCA CAAGTGGATGCCATGCCATGGCTTGCTTTTTTAAACAGTGTCTATCTTGAAACGTCCTAAAACACCTCCAGCAACTCCTG GGATGGTTGATTATCAGAATGCTGATCATGAACAGCTAATGAAAAGGCTTCGCCCTAATCATTCTGTAGAGGAGGTAATT TTTTATAAATTTCAGTTCAAGAGAAATACTAGCAATTCACTGTCTAACACGCTTTTTCTAACACTGTTTTAGTTGAAATT CACGTGAGATCCACGACATCATATGGGTCCTACTCCCAATTTGGTCGGACCCACTTGAATTTCAACCAATAAGAAAGAAT GTGTTGAAAAAGAGTGTTAGAGATTGTGTACCCATTCTTCTTCTATTTATTTTCTTTGCTTCACATGTTTCACAATACCT GGTATTTTTCTGCTATTTTGACTTCTAATGTTTGGCAACTCATCAGTATGGTTCATTTATAATATCAGATGTCATATCCT GTGGCTCGACAAGCCTCTTGGTCATTGGATGATCTGCCAAGAACGGTGACTATGACTTTGCATCAGGGGTCCTCTGTTAC AAGCATGGATTTTCATCCTTCTCACCATACCTTACTTCTTGGTATTGTTTATCATGCTTGTACTATGTGCAATATCTCAG TTGCTAAAATATTGACAAAATAATATAGCTTATTTTTTTCTTCTTCTAATGGTATATATTTCCCTGGAGCAGTTGGTTCT AATAATGGTGAGATTACCCTCTGGGAACTCAGTTTGCGAGAAAGGTTGGTCTCAAAGCCGTTCAAGTTATGGGATGCGTC AGCAAGCATGCTACCATTTCAGGTTTCATACAGTGCAGTATTCTTTTTAATGTTGCAGCACCCTTATTTATCAGTACCAA GAAAACTAGTCCAGCTTAAGCTATCATGGCCACTATATGATATAATGCTTGGCCATTAGTTTTGGTACTTGAAAATTCGG AACTTTTGGAATTTATAATTGAGAACTTTGCAGGCAGCTGCGGTCAAGGATGCACCTATTTCTGTCAGTCGTGTCACGTG GAGCCCTGATGGAAGTTTTGTAGGTATGTGACTTTTTTCTGAAACCATGTTGAAGCTTTCCTGTCAGGTGTATATCTAAC TGGTTGCTTTTCTTTAGGTGTTGCTTTTACTAAACATTTGATTCATTTATATGCCTACACTGGATCAAATGACCTAGCCC AGCGCATAGAGGTGATGTACTTCTCATAAAAAATAGATTAAGTTTTTGTTGCAGTTTGATTTACATTTCTTTGTCGATGC AGGTTGATGCCCATATTGGTGGTGTGAATGATTTGGCATTTGCTCATCCAAATAAACAGCTATGTATTGTGACTTGTGGG GACGATAAATTGATAAAGGTGTGTGCCTTATAATTTTGGATCTTGCAAAGGTTATCTAGTTTTCTAAAGAAGAAACTCTT GTAGGTGTGGGATACAAATGGCCGAAGACTATTTACCTTTGAGGGGCATGAGGCGCCTGTATATTCTATTTGTCCTCATC ACAAAGAGAGCATTCAGGTAATAAAATAGATATCATTATTGAGGCACCTATAATTTTAATGTTTATTTCGGGATGGTTGC GTGCTATAATTTGATAGATTTTTTGCTCTATGTAATGTACCTGTATGTGTAATTATTTTTTCATTAAACTCATAAATGTG GCTTTTACTTATAGTAGTCTTTGAAAATTACAGCCACCATCCTATTACTCATATATTGGCTCCATAACTGGAGAATAATG TGTTTCTTAACTTCTTGCAAGCTATATATACTAATACACATGTGGAAACTAAAGGTGGCTACTGTAACTTTTCAGTTTAT ATTTTCAACTGCCGTTGATGGAAAAATAAAGGCTTGGTTGTATGATAACATGGGTTCTAGGGTTGACTATGATGCCCCTG GTCATTGGTGTACTACGATGCTTTACAGTGCTGATGGAAGTAGGTAAGTTGGATTTGTATGAGGGTAATTATTTTGTTGT CAAATTCAATGGATAATTGAGTGTATTTTATTGAACTAACTCATGTCTAACAATTTATTTTCCCCTCCTTTCTCCAGATT GTTTTCTTGTGGGACAAGTAAAGATGGAGAGTCTTTTCTTGTTGAATGGAATGAAAGTGAAGGAGCCATTAAGAGAACAT ACAATGGATTCAGAAAGAAATCTGCCGGTGTTGTCCAGTTTGACACAACCCAAAATCGCTTCTTGGCTGCAGGCGAAGAC GGCCAAGTGAAGTTTTGGGACATGGACAATATAAATCTTCTTGCAAGCACTGATGCAGATGGTGGATTACAGGTCAGTAT TATGGTGAACTGTTCTTGTGGAGTATAACTATTCTTTATAAAACATCCTGTGACCTGTATATGATTGTATGAATCTACTC AGGGCCTTCCACGCTTGAGATTCAATAAGGAAGGAAATATTCTTGCTGTTACCACTATGGACAATGGATTCAAGATACTT GCTAATGCTACTGGTCTTAGATCCTTAAGAGCAATTGAAACTCCAGCATTTGAAGCATTGCGGACGCCCATTGAATCTGC TGCAGTCAAGGTAGTTATATAGTACTCTAAACCTTTGCTTGGTTCCTGATGTTTAGAGCAAAATATGTGAACTGTCCACT TTGTTTATGTCATATAGGTATCTGCCTCTTCTGTTAATGTTAGTCCTATCAACTGCAAAGTGGAAAGAAGCTCTCCTGTC AGGCCTTCTCCAATTCTTGTATGAACTTAATCCTGTCCTGTGACCTTAATAATCATCATTATGACTTTTACAGTGATATT GGTAGATGGTTCATTTTACGGCATCTTAATACTTGTTTGTAATTCATGGATTGGTTTTGGATTTTTCGATCCAGAATGGA GTTGATCCCGTGGGTCGAAATGTAGAGAGACCAAGAACCGTGGAAGATGTAACAGATAGGACTAGACAATGGCAACCAAC TGAAATTCTGGATACTGTCCAATGTCGGTCAGTTAGCTTGCCTGACAGCATGGAGTCTTTCAGCAAGGTAGATTGACTGA TGAACATATGAGATTGTCATTATTCTATTGCAAACTTCATGTGATGTACGCTGATTTAATGCTCTGATCCATATATAGGT CATCCGACTTTTATATACAAATTCTGGTGTTGGTATTTTGGCCCTTGGTTCAAATGGTATCCAGAAGCTTTGGAAATGGG CTCGCAATGAACACAATCCTACTGGGAAGGTAGTGTTAAGCAAATAATTACTTGGCATATTTCCTCCCTTCATTCCTTTT TTATTCTTTATACTTTTTATTAGTTTTTTCCTTTAAATAGAGAACTTAATTCTGAAGTTTATTTCATTACAGGCTACCGC CAGTGTTGTTCCACAACAGTGGCAACCCAACAGTGGTCTTCTTATGACTAATGATATCTCAGGTGTAAACCTTGAAGAAG CGGTCCCTTGCATTGCACTCTCAAAAAATGACTCATATGTCATGTCTGCCTGTGGCGGAAAGGTTTCACTATTTAACATG ATGACATTCAAGGTGTGTCTGGATAAACAACCCTGATGTTCCATTTAATTGCTTGGTTAACTGGTTACTTACAGTTCACA TTTTTATAGGTAATGACCACATTTATGCAACCACCTCCTGCATCTACCTTTCTAGCTTTCCATCCTCAGGATAACAACAT TATTGCCATTGGGATGGAGGATTCAACCATTCACATCTATAATGTCAGAGTGGATGAGGTGATTTTGTCTTTAACTGCTT ATTTTTTTCTGTTCAGATCTGCACAATCATCTCTAAATAATCTCACAAAACACAATCCCCCCTGCCTTCCTCCTTTGTGG CTATGTACCAGGTGAAATCAAAATTAAAGGGTCACCAGAAGCGAATAACTGGTTTGGCCTTCTCAACCAATCTTAACATC CTTGTCTCATCTGGTGCTGATGCTCAAGTAAGTCTTTTGACCTTTCTACTTTCTTGCTATATTCAGAGTGGCATGGAAAG CCTTTTATGCCGATTAGTTAGCCCCTAATAATTTGTTTTGGATCTTTTTTGTTGGTTATCCTAGTTTCCATTATTTGTTA TTATCATTGTTTTGTTAGATCTGTTTTTCAATTTAAAGGGTGCCAGAAAAAGTCTAGCTTGTGGATTCTGGACTATTATG AAATTAAATAAAAATCTACTTCAGTAGAATTGAGTTACTAGAAGGTGCCAAGTGCCAACACCTGCGGGGTGTTATTCAAA ATCATTTTCTCTTTACTTTTGTTTTGCCTAGTTGACTCTAAGCATTTTTTTTGTTCTCTCAGTTTACCTTTTTTATTGTA ATGGTTTTGTATCCAGATTGAGTTTAACTAAGTCTTTATTGGATTCTTGTTTTCTGTTTTCCTATATATCTATCCAAGGA GTTCTTTGGTTAGCTGAAAAATGGTTGAAAAGCTTGTACATTATGATTGGATGCACTTTTGTGCAAGTTTGTTCCTGGTT TGCTGCTCTTGATAAATTTGTGGTTATTCACTTATTCTTTTAGAATATTTGTGCTTCTACTAATGCTCTTTTCAATTCAA ATGCTTTATTTTTCCAGTAGGAAACATTGCCCATTGTTATGCTCAACACTTTTGCCATTTCTGGTTTTAAGAATTTCTAT TATGTTGGCCAGCTTTGCGTGTGGAGCATTGATACATGGGAGAAAAGAAAATCAATTCCATTACAACTACCTGCGGGAAG GTCACCTGTTGGTGATACACGGGTTCAGTTCCATTCGGATCAACTTCGCTTATTGGTGGTCCATGAGACTCAGTTGGCAG TATATGATGCCTTAAAGATGGAACGCATTCGGCAGGTAGGCAGTTTTTTCCAGTAATGATAGAGCTTCTTGTAGCTGACA AAATTGAAATTAAGATATGCTCCTAAATTGTTTTTGCTGCAGTGGGTTCCCCAAGATGCTCTGTCTGCTCCCATATCATG TGCAGTTTATTCTTGCAACAGTCAGTTAATATATGCTACATTTTGCGATGCAAACGTTGGGGTTTTCGATGCTGATACCT TGAGACTAAGATGTCGAATTGCACCATCTGTATGCTTGTCATCTGCTGCTTTAAGCGGGTATGTATCAGCTTAGTAGATT GCAATTAAATTAATCTTTATTGTATTTTAAATTTTGAACATTATATACAATGATGCTTTTTGTGAAATGACTCGGTAAAA AATTATAACTTGATACATGATATTGGTTACTTTATAAATTTCTAGATATTAATATGGTATTCTTAATACTTTCAATTTAA AAGATCATCTGGACTACGTTTTTTTTATGAAAAATTAAGGATTTTACTCCTCTAACCTCACAAAGTAAGCCATCACAATC AACGGTTGAAATTTTGATCTTATACTTGTACAAGAGTGTTCTTTAAGTCTCACAAAGTAAGTCTCAATCAATGGTTGCAA TGCTTTACTTTACTCTCTAAAGTAACTCTCTCATGGGCTAAATCTGAAAAACAAATATCCTTCCTCTGATTAGGGTGGGT GGTATTGTTTATCTGCCGCTGCAAAATTTGTGCCGGTGACATTTTGATCCGTGTTTGTGTATTGCAGAAACCAGGCTGTG TATCCTTTTGTGGTTGCGACTCATCCACTAGAACCTAACCAGTTTGCTGTTGGGTTAACTGATGGGTCTGTCAGAGTGAT AGAACCTACTGAATCAGAAGGTAAGTGGGGATCTTCTCCACCTGTGGACAATGGAATATTGAATGGTAGGACAGCTTCTT CATCTACAACAAGCAACCACACTGCCGATCAGGCCCAAAGATAA
CDS sequence (LotjaGi5g1v0227300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTCTTTGAGCAGGGAATTGGTGTTTCTCATACTCCAGTTTCTGGATGAGGAGAAGTTCAAAGAGTCTGTTCACAA ACTTGAGAAAGAATCAGGGTTCTTTTTCAATATGAAGTACTTTGAGGAAAAGGTGCAGGCTGGCGAATGGGAAGAAGTTG AGAAGTACTTAACAGGGTTTACTAAAGTTGACGATAATAGATACTCAATGAAAATATTCTTTGAAATCAGAAAGCAGAAG TATCTGGAAGCACTTGATCGGCAAGACAAAGCAAAAGCTGTGGAGATATTAGTTGGTGATTTAAAAGTGTTCTCCACCTT CAATGAGGAACTATACAAAGAAATCACTCAGCTGTTAACACTTACTAATTTCAGAGAGAATGAGCAGCTGTCTAAATATG GTGATACCAAAACTGCTAGGAGCATTATGTTGATAGAACTAAAAAAGCTCATAGAGGCAAATCCTCTTTTCCGTGATAAG CTTGTCTTCCCTACCCTCAGGTCATCAAGACTGCGAACTTTAATCAATCAAAGTCTGAACTGGCAGCACCAGCTCTGTAA AAACCCGAAGCCAAATCCAGATATAAAGACTTTATTTACAGATCATACTTGTGCACCTCCTAATGGTCCTCTGGCACCAA CCCCCATCAACCTTCCGATTGCTGCACTCGCAAAGCCTGCTGCTTATACTTCACTTGGAGCTCACGGTCCCTTCCCTCCT GTTGCTGCAACTGCTAATGCTAATGCTTTGGCTGGTTGGATGGCCAATGCCTCAGCTTCGTCATCTGTCCAAGCAGCTGT TGCCACAGCGTCAACTATTCCAGTGCCACAGAATCAAGTGTCTATCTTGAAACGTCCTAAAACACCTCCAGCAACTCCTG GGATGGTTGATTATCAGAATGCTGATCATGAACAGCTAATGAAAAGGCTTCGCCCTAATCATTCTGTAGAGGAGATGTCA TATCCTGTGGCTCGACAAGCCTCTTGGTCATTGGATGATCTGCCAAGAACGGTGACTATGACTTTGCATCAGGGGTCCTC TGTTACAAGCATGGATTTTCATCCTTCTCACCATACCTTACTTCTTGTTGGTTCTAATAATGGTGAGATTACCCTCTGGG AACTCAGTTTGCGAGAAAGGTTGGTCTCAAAGCCGTTCAAGTTATGGGATGCGTCAGCAAGCATGCTACCATTTCAGGCA GCTGCGGTCAAGGATGCACCTATTTCTGTCAGTCGTGTCACGTGGAGCCCTGATGGAAGTTTTGTAGGTGTTGCTTTTAC TAAACATTTGATTCATTTATATGCCTACACTGGATCAAATGACCTAGCCCAGCGCATAGAGGTTGATGCCCATATTGGTG GTGTGAATGATTTGGCATTTGCTCATCCAAATAAACAGCTATGTATTGTGACTTGTGGGGACGATAAATTGATAAAGGTG TGGGATACAAATGGCCGAAGACTATTTACCTTTGAGGGGCATGAGGCGCCTGTATATTCTATTTGTCCTCATCACAAAGA GAGCATTCAGTTTATATTTTCAACTGCCGTTGATGGAAAAATAAAGGCTTGGTTGTATGATAACATGGGTTCTAGGGTTG ACTATGATGCCCCTGGTCATTGGTGTACTACGATGCTTTACAGTGCTGATGGAAGTAGTAAAGATGGAGAGTCTTTTCTT GTTGAATGGAATGAAAGTGAAGGAGCCATTAAGAGAACATACAATGGATTCAGAAAGAAATCTGCCGGTGTTGTCCAGTT TGACACAACCCAAAATCGCTTCTTGGCTGCAGGCGAAGACGGCCAAGTGAAGTTTTGGGACATGGACAATATAAATCTTC TTGCAAGCACTGATGCAGATGGTGGATTACAGGGCCTTCCACGCTTGAGATTCAATAAGGAAGGAAATATTCTTGCTGTT ACCACTATGGACAATGGATTCAAGATACTTGCTAATGCTACTGGTCTTAGATCCTTAAGAGCAATTGAAACTCCAGCATT TGAAGCATTGCGGACGCCCATTGAATCTGCTGCAGTCAAGGTATCTGCCTCTTCTGTTAATGTTAGTCCTATCAACTGCA AAGTGGAAAGAAGCTCTCCTGTCAGGCCTTCTCCAATTCTTAATGGAGTTGATCCCGTGGGTCGAAATGTAGAGAGACCA AGAACCGTGGAAGATGTAACAGATAGGACTAGACAATGGCAACCAACTGAAATTCTGGATACTGTCCAATGTCGGTCAGT TAGCTTGCCTGACAGCATGGAGTCTTTCAGCAAGGTCATCCGACTTTTATATACAAATTCTGGTGTTGGTATTTTGGCCC TTGGTTCAAATGGTATCCAGAAGCTTTGGAAATGGGCTCGCAATGAACACAATCCTACTGGGAAGGCTACCGCCAGTGTT GTTCCACAACAGTGGCAACCCAACAGTGGTCTTCTTATGACTAATGATATCTCAGGTGTAAACCTTGAAGAAGCGGTCCC TTGCATTGCACTCTCAAAAAATGACTCATATGTCATGTCTGCCTGTGGCGGAAAGGTTTCACTATTTAACATGATGACAT TCAAGGTAATGACCACATTTATGCAACCACCTCCTGCATCTACCTTTCTAGCTTTCCATCCTCAGGATAACAACATTATT GCCATTGGGATGGAGGATTCAACCATTCACATCTATAATGTCAGAGTGGATGAGGTGAAATCAAAATTAAAGGGTCACCA GAAGCGAATAACTGGTTTGGCCTTCTCAACCAATCTTAACATCCTTGTCTCATCTGGTGCTGATGCTCAACTTTGCGTGT GGAGCATTGATACATGGGAGAAAAGAAAATCAATTCCATTACAACTACCTGCGGGAAGGTCACCTGTTGGTGATACACGG GTTCAGTTCCATTCGGATCAACTTCGCTTATTGGTGGTCCATGAGACTCAGTTGGCAGTATATGATGCCTTAAAGATGGA ACGCATTCGGCAGTGGGTTCCCCAAGATGCTCTGTCTGCTCCCATATCATGTGCAGTTTATTCTTGCAACAGTCAGTTAA TATATGCTACATTTTGCGATGCAAACGTTGGGGTTTTCGATGCTGATACCTTGAGACTAAGATGTCGAATTGCACCATCT GTATGCTTGTCATCTGCTGCTTTAAGCGGAAACCAGGCTGTGTATCCTTTTGTGGTTGCGACTCATCCACTAGAACCTAA CCAGTTTGCTGTTGGGTTAACTGATGGGTCTGTCAGAGTGATAGAACCTACTGAATCAGAAGGTAAGTGGGGATCTTCTC CACCTGTGGACAATGGAATATTGAATGGTAGGACAGCTTCTTCATCTACAACAAGCAACCACACTGCCGATCAGGCCCAA AGATAA
Protein sequence (LotjaGi5g1v0227300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSLSRELVFLILQFLDEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLTGFTKVDDNRYSMKIFFEIRKQK YLEALDRQDKAKAVEILVGDLKVFSTFNEELYKEITQLLTLTNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFRDK LVFPTLRSSRLRTLINQSLNWQHQLCKNPKPNPDIKTLFTDHTCAPPNGPLAPTPINLPIAALAKPAAYTSLGAHGPFPP VAATANANALAGWMANASASSSVQAAVATASTIPVPQNQVSILKRPKTPPATPGMVDYQNADHEQLMKRLRPNHSVEEMS YPVARQASWSLDDLPRTVTMTLHQGSSVTSMDFHPSHHTLLLVGSNNGEITLWELSLRERLVSKPFKLWDASASMLPFQA AAVKDAPISVSRVTWSPDGSFVGVAFTKHLIHLYAYTGSNDLAQRIEVDAHIGGVNDLAFAHPNKQLCIVTCGDDKLIKV WDTNGRRLFTFEGHEAPVYSICPHHKESIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSSKDGESFL VEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDGQVKFWDMDNINLLASTDADGGLQGLPRLRFNKEGNILAV TTMDNGFKILANATGLRSLRAIETPAFEALRTPIESAAVKVSASSVNVSPINCKVERSSPVRPSPILNGVDPVGRNVERP RTVEDVTDRTRQWQPTEILDTVQCRSVSLPDSMESFSKVIRLLYTNSGVGILALGSNGIQKLWKWARNEHNPTGKATASV VPQQWQPNSGLLMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMQPPPASTFLAFHPQDNNII AIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSIPLQLPAGRSPVGDTR VQFHSDQLRLLVVHETQLAVYDALKMERIRQWVPQDALSAPISCAVYSCNSQLIYATFCDANVGVFDADTLRLRCRIAPS VCLSSAALSGNQAVYPFVVATHPLEPNQFAVGLTDGSVRVIEPTESEGKWGSSPPVDNGILNGRTASSSTTSNHTADQAQ R
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1121 | 1121 | 0.0 | ||
| PANTHER | 1 | 1121 | 1121 | 0.0 | – | |
| ProSiteProfiles | 4 | 36 | 33 | 10.144 | ||
| SMART | 4 | 36 | 33 | 6.1E-5 | ||
| ProSiteProfiles | 34 | 92 | 59 | 13.23 | ||
| SMART | 34 | 92 | 59 | 3.0E-13 | ||
| Gene3D | 329 | 394 | 66 | 5.5E-6 | ||
| SUPERFAMILY | 334 | 940 | 607 | 4.63E-42 | ||
| SMART | 335 | 374 | 40 | 6.0E-4 | ||
| ProSiteProfiles | 341 | 383 | 43 | 9.439 | ||
| ProSiteProfiles | 341 | 616 | 276 | 14.16 | ||
| SMART | 397 | 435 | 39 | 150.0 | ||
| Gene3D | 408 | 663 | 256 | 3.2E-32 | ||
| SMART | 439 | 482 | 44 | 0.0012 | ||
| Pfam | 448 | 482 | 35 | 0.0022 | ||
| ProSiteProfiles | 448 | 482 | 35 | 8.771 | ||
| ProSitePatterns | 469 | 483 | 15 | - | ||
| SMART | 484 | 525 | 42 | 0.0081 | ||
| SUPERFAMILY | 511 | 797 | 287 | 1.46E-11 | ||
| SMART | 567 | 607 | 41 | 0.23 | ||
| ProSiteProfiles | 585 | 616 | 32 | 9.64 | ||
| SMART | 814 | 850 | 37 | 280.0 | ||
| Gene3D | 819 | 1093 | 275 | 5.9E-31 | ||
| SMART | 853 | 893 | 41 | 2.1 | ||
| ProSiteProfiles | 860 | 944 | 85 | 15.267 | ||
| SMART | 896 | 935 | 40 | 6.5E-6 | ||
| Pfam | 902 | 935 | 34 | 0.0011 | ||
| ProSiteProfiles | 903 | 944 | 42 | 13.416 | ||
| SUPERFAMILY | 959 | 1087 | 129 | 4.94E-7 | ||
| SMART | 985 | 1027 | 43 | 54.0 | ||
| SMART | 1041 | 1082 | 42 | 87.0 | ||
| MobiDBLite | 1084 | 1121 | 38 | - | – | |
| MobiDBLite | 1098 | 1121 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi5g1v0227300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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