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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0233000 |
| Transcript ID | LotjaGi5g1v0233000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT3G05840.1 Protein kinase superfamily protein; Swiss-Prot: sp|P51137|MSK1_MEDSA Glycogen synthase kinase-3 homolog MsK-1; TrEMBL-Plants: tr|Q53VM0|Q53VM0_LOTJA Ser/Thr protein kinase; Found in the gene: LotjaGi5g1v0233000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54040914..54045900) extracted from Lotus japonicus Gifu genome v1.2.
TGAGAGTGAGTTTCGAACTTTGAAGTTTGAATGGTCAAAAGTTAAGAGACCCAAGCAAGCTTCACTCATGTTCACACTCA TTTATTTTTTATTTACCCCACAATTAAAAAAAATAAAAATAACCAATGGTTGTTGATTTAAATAAGGTGTCGGGTTCGAG TCATGTAGATAAAAAAAATCATGTTGGGAGAGTTAGCTCTACTATGATGTAGATGTTCACGGCTCGAATAAGATTGTCTC CGAAAGAGAACACATGTCTTACACCGAAAAAAAATAAAATAAAAATAAAGAAAGTTTTCTTCTTTGACTGTAACCAGCGC ATTATAGCACAAACCACACAAACAAAAAGCACTTCACAAAACCAAACAAGCCATTACACAACACAACACAACGGAACAAC ACATGGGTATGTATGGTATGGATCTAACTCTTTCATCTGCGCCGTTTTTCTCTTCCAACTTGCTTCTCTTCATTTTTCTT ACTCAACTGTAGATTGATTTCACCTTTCCCTTTCTTCTTTTTCATGCTTTTCACATCACTGTTCATTTTTTCTTCTTCCT GAGTTTGATTCTTCATCTTCTCGAGATGCAATTGCAACCCATGTTTTTTTTTTGTTTCTCGTATGTTTCTACCTCGTCCT GTTCCTTAATTATGTTCTCTAAATTTGGATCGAGTTGTTTCTTGTTCGATTTCATGGATCTTCGGTTAAAAAAATTGATT TTTAATTTGATTTTTGATGATTTGTGGTGTTTTCATGGAGATGATTGATGGATCTTTGATATTCCTTCAAAAAATTTACT TTTTGCAAAATGGGTATTTAATTATTTATTTATTTGCATTTGTGAATTGCTTTAATTAATGTTTGCTGTATGTGAATGGT GTAATGTTCCTATTTGGGTTCTGTTTCCATGTTTTTTTTTGTTTCTGATTAAGGCTACAGATAAAGAAAGTTACATTTTT TTTTTTCATTCTGGCAGGTAGATGAGTGGTTTTTGAGAAGCTAAAAGAGAAAGGGAGTTAGTGGGAGATGGCTTCGGTTG GTGTGGCACCAACTTCAGGTGTGAGAGAAGCCAGTGGTTGCCATGGAGCAGCAGGTGTTGATAGATTGCCAGAGGAGATG AACGATATGAAAATTAGGGATGATAGAGTATGTCACATAGTTTCAGACTTATTCTATTTTGTGTTTGTGTGTGGTTGATT TTTAATTTCAGGCCCAGTTGCTTACAGCTTTGCTTCTCTTGTTGTAGGAAATGGAAGCCACAGTTGTTGATGGTAACGAT GTAACGGAGACTGGACATATCATTGTCACTACCATTGGGGGCAGAAATGGTCAGCCGAAGCAGGTATACCTTCTCCCTTT ATTTTTCTATTGTCAAGGATGTCATGTGAAATAATTCAACTCTTGCTTACTCACTTGCTGTGCTTACCTCATGCTTCTTT AACAGTTGATGCTTATTATTTTATTTGTTTGTGAGTGTTGTTGATATTTTGATTGAAAATAATTGTATATGTAAGTTTAA CAAAAGAACCCTCAAGATTTGGGTATCATGACAATACTTTTTTTACAGCGACTAACATGTAACTATTGCGGTGTTCAACA TGTTTGTGTTGTGTCTATTGATTGGCAACCAACTATCCTTAGTATGTGTCTTGATACCAGCTGAGTGCATTGTGAACAAA ATTTCATCCCAATCAATAAGAAGAGTTCTGTTCTCTTTTTTGTCTTTCTTAGAGCGCACGCTAATGGCTATTGTTGCCAA TGAATATCTAGACATAGCTAGCAGTTACTAATTGGTGAAGATGTAAAGAATGTCTACATATTTACTGGCAGTATCTATTT GAATTCTTCTGTCAATATTTTGAAATATTATTGCTTTAGAATAATTTTATCTCCTTTTTAATATTTCAGACTATAAGCTA TATGGCAGAGCGTATTGTCGGGCATGGATCGTTTGGAGTTGTCTTCCAGGTATCAACAATGTGTATCCAGTCAATTGGAT GGGATGCGTTACTCTTGCGTTTTCATTATGGTGGCTTGTGATGCCTTTAGCTCTAAAATTGTGCATGATTGTAGGCTAAA TGCTTGGAAACTGGTGAAACTGTCGCTATCAAGAAGGTTCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCAGACAAT GCGCCTTCTTGACCACCCGAATGTCGTTGCTTTGAAGCATTGTTTCTTTTCAACTACTGAAAAGGATGAACTATACCTTA ATTTGGTACTTGAGTATGTTCCTGAAACAGTTCATCGTGTGATCAAACATTACAACAAGTTGAATCAAAGGTTACCACTG ATTTATGTGAAGCTCTACACATACCAGGTATACAGTTTTACCCTTCCTGTATTCAACTTTCACCTTGTTGCGGTAGTAAT AAATTTTATTTCTTTTGTTAATGTGTATTGCAGATCTTTAGAGCATTATCTTATATTCATCGATGTATCGGAGTCTGCCA TCGGGACATCAAGCCTCAAAATCTATTGGTATGACCTTTATCTTATTTTGCATTTATCCTCTCATTGATAACTTTCCCTC TTTTAGTTCAATTCTCATGCTTTAAAGTCATGGTTGTATTTAGAGTGGCTAAAAGATAGGAAATGGCACTAATTCAAACT CTGTTGAATTTTCTAACTGAATACTTCTCTTTGCAGGTCAATCCACACACTCACCAAGTTAAGTTATGTGACTTTGGAAG TGCTAAAGTCTTGGTATGTATCCTTCAATAATTTCTCTTCAACCTTATGTTGCCCCAGGTTAAATAGTAATTTTATTTTT CCCTAATTGGTCTTACTTTTGACAGGTAAAAGGAGAACCAAATATATCATACATATGTTCTAGATATTATAGAGCACCTG AGCTTATATTTGGAGCAACTGAGTATACTACAGCTATTGATGTTTGGTCTGTTGGTTGTGTTTTAGCTGAACTGCTGCTT GGACAGGTTGGTAGCTGTTAATATGAGCTTCTTTAATTTGTGATTTAGCAGTATATTTCTTTTGAAATGTGTTTGCTTTT TCCAGCCTTTGTTTCCTGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATTATCAAGGTAATCTTTATGATACTTATTTGC ATTGGAGGTTTTTTGATATTGACATACTTGAATATTCTGGTAACTTGTAACAACATTATGTAATGCATATTGAGTTGTTG ATCTTGTCATTTGATTTAGCATTTTAAGTTGAATTGGATTTGAGGACTTGATCAGTTGGATTGGTGGCCTTGCTTTTTCT TGAAAGAGCGCAAGTATCTTTAAAATGTAAATGACCCATTTGTGGCTTGTTTTGATAGGTTCTGGGCACTCCTACAAGGG AAGAGATTAAATGCATGAATCCTAATTATACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGGTAGTA TTAATAAATCTAATAGCATGTGATGCTTTATTCTCATGCTCATCATACTAATGTGTTAAAAAATCCTCATTCTAAATTAT GTTTATGTTTGATTTTCTTCCTCTAGATCTTCCATAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTATCAAGACTACTA CAATACTCCCCTAACCTGCGGTGCACAGCTGTGAGTACATGACTTCTTGCTAACCTTTTGTATCCACCTTAAAAACTAAA AATAGTGCTTCCCCTCAGTGGCGTAATGATTCTGCAAGTTTGTATTTGGCAGTGTTGTGGCTTCTAATCTTGTTATTCAA TGGCTGTTTCTCATCTTCTGAGGATATATATCATGTGTGTCTTTGCTTTACTTGATGCAGTTAGATGCCTTGACCCATCC TTTCTTTGATGAGCTTCGTGAACCAAGCACTCGCTTGCCAACCGGCCGTTTTCTTCCACCATTATTTAACTTCAAATCTC ATGGTATGTTAATTTTGGAATAGGGAATTATGATTCTGGTCCTCTTTTGCTTTTCGTTAGTAGTTATGGCTAAATCTGTG TGTTGTTATTGGTGCCTGTGTACCAGAACTGAAAGGAGTCCCAGCTGAGATTTTGGTGAAATTGGTTCCGGAGCATGCGA GGAAGCAATGCCCATTTCTTGGCTTGTAATATGTTGTGATGAAATGTAACAGAACTGGAAGTGTTGTTTCCATATATGAA CGTGGCGACACGTTCATTCTATTTAATGATATGATATTGTTAGTAGTTTTGTTGTATTCGGTTTCCCTGTCTAAGCAGAT TTAGCGATACATGCTACCCAATATTTACCCAACCCTCTATGGGTATTGTATCACAGCAGATTGTAACAAGCAATAGAAGA CAAATGTTTGCAATTATCTAATTGTTGAATCTGTGTATTTGTATTTGTTGAGACAATGATGGGTTGTTGGCTTAACTTAG TCATGCTTAGCATGTTAGTAGGAAGTTGTGGTATCCTTGTTTGTATTCTCCTGTCTGTAATCTCTGTCATCAACATAGGA CCAAGTCTCAGTGATGTCTTGAATAGTTCTCTATTTAGAAACATTAAACTCAGTAAATGAAAGTGATTGTTTAGTTTAAT CTAACAATCAGGATGATCTAGTCAAGCATTATAGAGAGATACGTTGGATGAAGCATGGTTTTTGTATTAATATTAGCTTT AAACTATATGTTTGTGTTTGATATTCATGGAGAGTCCATTTAGATTCCCTCTCACTTTACTTAAACATAACATGTGAAAA GAGCTTGCAATCTCACTCTGTTTACTCAGATTCAAACTCACTTGAATCTTGAAAGAGTGGTTGATATATATTCCCTGATT ACTTTTTGGACTTTTGCAGTCCCCTTTAGTCACCAAAGCTGAAAATGTTAGCCAGACACTGATTATGCATTGACATTGTA CAGCCAAGTTGCTTTTACTTCCACCTTTACTTTTTCTTTACGGCAAGAATATTTTCATCATTTGAGACTAGTAAGTAGTA ACTTTCCGAGTAATTTCACAGGGGGGG
CDS sequence (LotjaGi5g1v0233000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCGGTTGGTGTGGCACCAACTTCAGGTGTGAGAGAAGCCAGTGGTTGCCATGGAGCAGCAGGTGTTGATAGATT GCCAGAGGAGATGAACGATATGAAAATTAGGGATGATAGAGAAATGGAAGCCACAGTTGTTGATGGTAACGATGTAACGG AGACTGGACATATCATTGTCACTACCATTGGGGGCAGAAATGGTCAGCCGAAGCAGACTATAAGCTATATGGCAGAGCGT ATTGTCGGGCATGGATCGTTTGGAGTTGTCTTCCAGGCTAAATGCTTGGAAACTGGTGAAACTGTCGCTATCAAGAAGGT TCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCAGACAATGCGCCTTCTTGACCACCCGAATGTCGTTGCTTTGAAGC ATTGTTTCTTTTCAACTACTGAAAAGGATGAACTATACCTTAATTTGGTACTTGAGTATGTTCCTGAAACAGTTCATCGT GTGATCAAACATTACAACAAGTTGAATCAAAGGTTACCACTGATTTATGTGAAGCTCTACACATACCAGATCTTTAGAGC ATTATCTTATATTCATCGATGTATCGGAGTCTGCCATCGGGACATCAAGCCTCAAAATCTATTGGTCAATCCACACACTC ACCAAGTTAAGTTATGTGACTTTGGAAGTGCTAAAGTCTTGGTAAAAGGAGAACCAAATATATCATACATATGTTCTAGA TATTATAGAGCACCTGAGCTTATATTTGGAGCAACTGAGTATACTACAGCTATTGATGTTTGGTCTGTTGGTTGTGTTTT AGCTGAACTGCTGCTTGGACAGCCTTTGTTTCCTGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATTATCAAGGTTCTGG GCACTCCTACAAGGGAAGAGATTAAATGCATGAATCCTAATTATACAGAATTTAAATTCCCACAGATTAAAGCACATCCA TGGCACAAGATCTTCCATAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTATCAAGACTACTACAATACTCCCCTAACCT GCGGTGCACAGCTTTAGATGCCTTGACCCATCCTTTCTTTGATGAGCTTCGTGAACCAAGCACTCGCTTGCCAACCGGCC GTTTTCTTCCACCATTATTTAACTTCAAATCTCATGAACTGAAAGGAGTCCCAGCTGAGATTTTGGTGAAATTGGTTCCG GAGCATGCGAGGAAGCAATGCCCATTTCTTGGCTTGTAA
Protein sequence (LotjaGi5g1v0233000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASVGVAPTSGVREASGCHGAAGVDRLPEEMNDMKIRDDREMEATVVDGNDVTETGHIIVTTIGGRNGQPKQTISYMAER IVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHR VIKHYNKLNQRLPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR YYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDELREPSTRLPTGRFLPPLFNFKSHELKGVPAEILVKLVP EHARKQCPFLGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 412 | 412 | 1.5E-272 | – | |
| PANTHER | 1 | 412 | 412 | 1.5E-272 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| Gene3D | 60 | 155 | 96 | 6.7E-35 | – | |
| CDD | 71 | 363 | 293 | 0.0 | ||
| SUPERFAMILY | 75 | 386 | 312 | 1.2E-89 | ||
| ProSiteProfiles | 76 | 360 | 285 | 44.329 | ||
| Pfam | 76 | 360 | 285 | 6.9E-65 | ||
| SMART | 76 | 360 | 285 | 3.6E-92 | ||
| ProSitePatterns | 82 | 106 | 25 | - | ||
| Gene3D | 156 | 404 | 249 | 5.3E-81 | – | |
| ProSitePatterns | 197 | 209 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0233000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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