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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0241000 |
| Transcript ID | LotjaGi5g1v0241000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT5G26751.1 shaggy-related kinase 11; Swiss-Prot: sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3; TrEMBL-Plants: tr|A0A0B2NY95|A0A0B2NY95_GLYSO Glycogen synthase kinase-3 like MsK-3; Found in the gene: LotjaGi5g1v0241000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:54933066..54935780) extracted from Lotus japonicus Gifu genome v1.2.
GTGATGGCAACAGCGGGTGTAGCGCCTGCTCCTGGATTAAGAGATGCTAATGCAAGTTCAGGTGGTGTTGATAAGTTGCC TGATGAGTTGAATGGCATGAAAATTAGGGATGACAGGGTAAATAAAGATAATTGTCTATTTTATCTTATTCTGTCTGCAT CACTCCCTTTAGCGACTTCCTGGTGAATATTTAGTCTACTTATGTCAAAATTTGTTTAACAAAATGCAGGAAATGGAAGA AACTGTCATAGATGGAAATGGGGCTGAAACAGGACATGTAATTGTCACCACTATTGGCGGTAAAAATGGACAGCCAAAGC AGGTTTGATTTCGATATCTTATCTATTACGTGAATAATCAATATGTGTGTTCATATTTACATGGCTATAATGTTGCGACG TTTTTGTGATTGTAGACTATAAGCTACATGGCTGAGCGTATTGTTGGACATGGATCATTTGGTGTAGTTTTCCAGGTCAG TCCCTTGTATGTTCTTTACTTTGCAGCTTTTGATTAGACAGTAGTCTAGATTTTTCAGTAAACTGATATTTATTTATTTT TACCTTTATTGTGTAGGCAAAGTGCTTGGAAACTGGTGAAACTGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGGTACA AGAACCGGGAATTGCAAACCATGCGCCTCATGGATCATCCCAATGTTGTAACTTTGAAGCATTGTTTCTTTTCAACAACT GAAAAAGATGAGCTTTATCTTAACTTGGTACTTGAGTATGTTCCTGAGACTGTTCATCGAGTGATCAGACACTACAACAA AATGAATCAAAGAATGCCCTTAATATATGTAAAGCTTTATTCTTACCAGGTATATTTCTATGTGCTTTATCAATTTTGAT CTTTCTTTTCCTGTTTAAAGAGATACTATGAAAGCCTCTACGTGAACCCACTTTGTTGGTTTTCATTCCTTCTGCTTCTT ATTTGTAGATATGTAGAGCTCTAGCTTATATTCACAACTGTATTGGAGTCACTCACAGGGATATAAAACCTCAAAATTTA CTGGTATGTTCACATGGAAACATCAAAATTTTGTAAGACTAATTTACTATCTCATCTGATGGAGTAGTTCATGCATATCT CTTTTGGATGTTTTCTGATAACAGGTCAATCCTCACACCCACCAGCTGAAGATTTGTGACTTTGGGAGTGCCAAAGTATT GGTATGTTTATTCTCAACCTGGAAATGGAAATCATTCTGTTTTCTCTGTCTATCTGATGTATTAATTGTTTTTTACATAT TTGACAGGTCAAGGGCGAACCGAACATATCTTACATCTGTTCTAGGTACTATAGAGCACCTGAGCTTATATTTGGAGCAA CTGAGTACACCACAGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGAGAACTTTTGCTTGGACAGGTATCTAGCTGT TAATTATATTAGGTTATTTGTATATTTAGAATTCATATTGGCACAGAAACTGAAATTGAACTCTTATTCTTGTCAGCCTC TCTTTCCCGGCGAGAGTGGAGTAGATCAGCTTGTTGAAATTATCAAGGTAACATCAGTTCTAAATACTATGTAAAATCAT GTTATCTGCCATTTTCTGTCTTTACATGATGGATGGTTCTTACTTTGAATAATCATCACCTGAATGTATAGTGATTGTCT TTACTTGTAACTAACTTGTAGATATCCATAATAATAGTCACCTTGTTTTATTATTTCCTTTATCCTTGTTCAGTGCCATG ATATTTTTCATTAGTTCTGAAGATTTATGGGATTCAAGTGCAGGTTTTAGGTACCCCAACTAGGGAAGAAATAAAGTGTA TGAATCCGAATTACACTGAGTTCAAATTCCCACAAATCAAAGCTCACCCATGGCACAAGGTGATCGAACGTTATTTTTTC TTGTCTGTTTATGCTCATTATTTCATAGTGATATTCATATATATATATGAACCTTCATCATCAGATCTTTCACAAGCGTA TGCCACCTGAAGCTGTGGATCTCGTGTCAAGACTACTACAATACTCTCCAAATCTTCGATGCACAGCTGTGAGTATTTAT TTTTTTCAAGATGTGTGAGAGCTTTAAAGACATTTCACATCCTATTGAATACCTTATACTTTCATGATCATTTATGGCTG CTGTTAATGGCATAATCTTTCAATGATATGTGATGAACTCCCTAGTCTGTCTTATTAAAAATTACGTGTGATTTTGAATT TTTATCCATACTTCTTTTTGTCCTTAGTTTTTTAAAAAAATCCTTCTAGTTTTTTTCTGGACATGCCTACTAATGCCATT GTATAGCCTTGAAAGTTCCTTCACTTTCCTTACTGAATTTTCACCAATACTATTTCTATAATTGTCTCCAAATGAACATT ATATTAAACTACATTGTTTTGTGCCTTGTGCAATGTAGCTGGAGGCCCTGGTCCATCCATTCTTTGATGAACTTCGTGAT CCAAATACCCACTTACCAAATGGACGCTTCCTCCCTCCACTTTTTAACTTCAAAGCCAACGGTAATAACTTATTTTCATT TTAGTATCATGTTATTATATCCTTGTATCGAATTTCTCGTTTAATGCTGGTGTTGTTGGTGATCTGATACAGAGCTTAGG GGAGTACCTGCTGAAATGCTGGTGAAGCTGATTCCATCTCATGCAAGAAAGCAATGTGCGTTGTTTGGTTCGTAG
CDS sequence (LotjaGi5g1v0241000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAGCGGGTGTAGCGCCTGCTCCTGGATTAAGAGATGCTAATGCAAGTTCAGGTGGTGTTGATAAGTTGCCTGA TGAGTTGAATGGCATGAAAATTAGGGATGACAGGGAAATGGAAGAAACTGTCATAGATGGAAATGGGGCTGAAACAGGAC ATGTAATTGTCACCACTATTGGCGGTAAAAATGGACAGCCAAAGCAGACTATAAGCTACATGGCTGAGCGTATTGTTGGA CATGGATCATTTGGTGTAGTTTTCCAGGCAAAGTGCTTGGAAACTGGTGAAACTGTGGCTATAAAGAAGGTTCTTCAAGA CAAGAGGTACAAGAACCGGGAATTGCAAACCATGCGCCTCATGGATCATCCCAATGTTGTAACTTTGAAGCATTGTTTCT TTTCAACAACTGAAAAAGATGAGCTTTATCTTAACTTGGTACTTGAGTATGTTCCTGAGACTGTTCATCGAGTGATCAGA CACTACAACAAAATGAATCAAAGAATGCCCTTAATATATGTAAAGCTTTATTCTTACCAGATATGTAGAGCTCTAGCTTA TATTCACAACTGTATTGGAGTCACTCACAGGGATATAAAACCTCAAAATTTACTGGTCAATCCTCACACCCACCAGCTGA AGATTTGTGACTTTGGGAGTGCCAAAGTATTGGTCAAGGGCGAACCGAACATATCTTACATCTGTTCTAGGTACTATAGA GCACCTGAGCTTATATTTGGAGCAACTGAGTACACCACAGCCATTGACATCTGGTCAGCTGGTTGTGTACTTGGAGAACT TTTGCTTGGACAGCCTCTCTTTCCCGGCGAGAGTGGAGTAGATCAGCTTGTTGAAATTATCAAGGTTTTAGGTACCCCAA CTAGGGAAGAAATAAAGTGTATGAATCCGAATTACACTGAGTTCAAATTCCCACAAATCAAAGCTCACCCATGGCACAAG ATCTTTCACAAGCGTATGCCACCTGAAGCTGTGGATCTCGTGTCAAGACTACTACAATACTCTCCAAATCTTCGATGCAC AGCTCTGGAGGCCCTGGTCCATCCATTCTTTGATGAACTTCGTGATCCAAATACCCACTTACCAAATGGACGCTTCCTCC CTCCACTTTTTAACTTCAAAGCCAACGAGCTTAGGGGAGTACCTGCTGAAATGCTGGTGAAGCTGATTCCATCTCATGCA AGAAAGCAATGTGCGTTGTTTGGTTCGTAG
Protein sequence (LotjaGi5g1v0241000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATAGVAPAPGLRDANASSGGVDKLPDELNGMKIRDDREMEETVIDGNGAETGHVIVTTIGGKNGQPKQTISYMAERIVG HGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLMDHPNVVTLKHCFFSTTEKDELYLNLVLEYVPETVHRVIR HYNKMNQRMPLIYVKLYSYQICRALAYIHNCIGVTHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYR APELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHK IFHKRMPPEAVDLVSRLLQYSPNLRCTALEALVHPFFDELRDPNTHLPNGRFLPPLFNFKANELRGVPAEMLVKLIPSHA RKQCALFGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 1 | 407 | 407 | 3.2E-266 | – | |
| PANTHER | 1 | 407 | 407 | 3.2E-266 | – | |
| Gene3D | 57 | 152 | 96 | 9.6E-35 | – | |
| CDD | 68 | 360 | 293 | 0.0 | ||
| SUPERFAMILY | 72 | 382 | 311 | 1.46E-88 | ||
| SMART | 73 | 357 | 285 | 2.1E-90 | ||
| Pfam | 73 | 357 | 285 | 6.6E-64 | ||
| ProSiteProfiles | 73 | 357 | 285 | 43.891 | ||
| ProSitePatterns | 79 | 103 | 25 | - | ||
| Gene3D | 153 | 401 | 249 | 3.5E-80 | – | |
| ProSitePatterns | 194 | 206 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0241000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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